RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 SHANK3Q9BYB0 1731 aa17.41■□□□□ 0.38
COL4A2-210ENST00000617564 GCP02774 474 aa17.4■□□□□ 0.38
COL4A2-210ENST00000617564 SRPK2P78362 688 aaKnown RBP17.4■□□□□ 0.38
COL4A2-210ENST00000617564 MTFR1LQ9H019 292 aa17.4■□□□□ 0.38
COL4A2-210ENST00000617564 SLIT3O75094 1523 aa17.39■□□□□ 0.37
COL4A2-210ENST00000617564 HSPA6P17066 643 aa17.39■□□□□ 0.37
COL4A2-210ENST00000617564 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
COL4A2-210ENST00000617564 USP6P35125 1406 aa17.38■□□□□ 0.37
COL4A2-210ENST00000617564 CRB1P82279 1406 aa17.38■□□□□ 0.37
COL4A2-210ENST00000617564 NBPF1Q3BBV0 1214 aa17.38■□□□□ 0.37
COL4A2-210ENST00000617564 ARXQ96QS3 562 aa17.38■□□□□ 0.37
COL4A2-210ENST00000617564 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
COL4A2-210ENST00000617564 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
COL4A2-210ENST00000617564 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
COL4A2-210ENST00000617564 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
COL4A2-210ENST00000617564 MAP3K5Q99683 1374 aa17.37■□□□□ 0.37
COL4A2-210ENST00000617564 OVOS2A0A0G2JMS6 1433 aa17.37■□□□□ 0.37
COL4A2-210ENST00000617564 OVOS2A0A0J9YW53 1432 aa17.37■□□□□ 0.37
COL4A2-210ENST00000617564 OVOS2Q6IE36 1432 aa17.37■□□□□ 0.37
COL4A2-210ENST00000617564 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
COL4A2-210ENST00000617564 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
COL4A2-210ENST00000617564 LRRC37A3O60309 1634 aa17.34■□□□□ 0.37
COL4A2-210ENST00000617564 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
COL4A2-210ENST00000617564 NLRP6P59044 892 aa17.33■□□□□ 0.36
COL4A2-210ENST00000617564 SLC15A2Q16348 729 aa17.33■□□□□ 0.36
COL4A2-210ENST00000617564 PROM2Q8N271 834 aa17.33■□□□□ 0.36
COL4A2-210ENST00000617564 CABP1Q9NZU7 370 aa17.32■□□□□ 0.36
COL4A2-210ENST00000617564 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
COL4A2-210ENST00000617564 CAPN15O75808 1086 aa17.31■□□□□ 0.36
COL4A2-210ENST00000617564 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
COL4A2-210ENST00000617564 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
COL4A2-210ENST00000617564 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
COL4A2-210ENST00000617564 COL18A1P39060 1754 aa17.3■□□□□ 0.36
COL4A2-210ENST00000617564 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
COL4A2-210ENST00000617564 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
COL4A2-210ENST00000617564 BCL9O00512 1426 aa17.3■□□□□ 0.36
COL4A2-210ENST00000617564 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
COL4A2-210ENST00000617564 ADRA2BP18089 450 aa17.29■□□□□ 0.36
COL4A2-210ENST00000617564 DDB1Q16531 1140 aa17.29■□□□□ 0.36
COL4A2-210ENST00000617564 CDCA7Q9BWT1 371 aaPredicted RBP17.29■□□□□ 0.36
COL4A2-210ENST00000617564 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
COL4A2-210ENST00000617564 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
COL4A2-210ENST00000617564 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
COL4A2-210ENST00000617564 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
COL4A2-210ENST00000617564 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
COL4A2-210ENST00000617564 TXNRD1Q16881 649 aa17.27■□□□□ 0.36
COL4A2-210ENST00000617564 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
COL4A2-210ENST00000617564 ABCC6O95255 1503 aa17.26■□□□□ 0.35
COL4A2-210ENST00000617564 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
COL4A2-210ENST00000617564 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
COL4A2-210ENST00000617564 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
COL4A2-210ENST00000617564 AKAP12Q02952 1782 aa17.25■□□□□ 0.35
COL4A2-210ENST00000617564 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
COL4A2-210ENST00000617564 TTC21BQ7Z4L5 1316 aa17.24■□□□□ 0.35
COL4A2-210ENST00000617564 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
COL4A2-210ENST00000617564 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
COL4A2-210ENST00000617564 NFAT5O94916 1531 aa17.23■□□□□ 0.35
COL4A2-210ENST00000617564 CARD10Q9BWT7 1032 aa17.23■□□□□ 0.35
COL4A2-210ENST00000617564 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
COL4A2-210ENST00000617564 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
COL4A2-210ENST00000617564 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
COL4A2-210ENST00000617564 PRELPP51888 382 aa17.21■□□□□ 0.35
COL4A2-210ENST00000617564 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
COL4A2-210ENST00000617564 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
COL4A2-210ENST00000617564 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
COL4A2-210ENST00000617564 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
COL4A2-210ENST00000617564 CSB-PGBD3P0DP91 1061 aa17.19■□□□□ 0.34
COL4A2-210ENST00000617564 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
COL4A2-210ENST00000617564 USP54Q70EL1 1684 aa17.19■□□□□ 0.34
COL4A2-210ENST00000617564 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
COL4A2-210ENST00000617564 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
COL4A2-210ENST00000617564 RGPD5Q99666 1765 aa17.18■□□□□ 0.34
COL4A2-210ENST00000617564 SLC34A2O95436 690 aa17.18■□□□□ 0.34
COL4A2-210ENST00000617564 YBX3P16989 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL4A2-210ENST00000617564 APLP1P51693 650 aa17.18■□□□□ 0.34
COL4A2-210ENST00000617564 NLGN2Q8NFZ4 835 aa17.18■□□□□ 0.34
COL4A2-210ENST00000617564 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
COL4A2-210ENST00000617564 EXOC5O00471 708 aa17.17■□□□□ 0.34
COL4A2-210ENST00000617564 POLD1P28340 1107 aa17.17■□□□□ 0.34
COL4A2-210ENST00000617564 SOX12O15370 315 aa17.16■□□□□ 0.34
COL4A2-210ENST00000617564 TNS4Q8IZW8 715 aa17.16■□□□□ 0.34
COL4A2-210ENST00000617564 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
COL4A2-210ENST00000617564 DNAJC5GQ8N7S2 189 aa17.14■□□□□ 0.33
COL4A2-210ENST00000617564 ERBB3P21860 1342 aa17.14■□□□□ 0.33
COL4A2-210ENST00000617564 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
COL4A2-210ENST00000617564 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
COL4A2-210ENST00000617564 ADCY9O60503 1353 aa17.12■□□□□ 0.33
COL4A2-210ENST00000617564 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
COL4A2-210ENST00000617564 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
COL4A2-210ENST00000617564 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
COL4A2-210ENST00000617564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL4A2-210ENST00000617564 EDC4Q6P2E9 1401 aaKnown RBP17.09■□□□□ 0.33
COL4A2-210ENST00000617564 LTN1O94822 1766 aa17.08■□□□□ 0.33
COL4A2-210ENST00000617564 KIF3CO14782 793 aa17.08■□□□□ 0.32
COL4A2-210ENST00000617564 IL2RBP14784 551 aa17.08■□□□□ 0.32
COL4A2-210ENST00000617564 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
COL4A2-210ENST00000617564 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.32
COL4A2-210ENST00000617564 NME9Q86XW9 330 aa17.08■□□□□ 0.32
COL4A2-210ENST00000617564 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
COL4A2-210ENST00000617564 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms