RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 HOXC9P31274 260 aa20.27■□□□□ 0.84
CBWD1-225ENST00000616944 IL13P35225 146 aa20.27■□□□□ 0.84
CBWD1-225ENST00000616944 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
CBWD1-225ENST00000616944 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
CBWD1-225ENST00000616944 LMO7Q8WWI1 1683 aa20.27■□□□□ 0.84
CBWD1-225ENST00000616944 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
CBWD1-225ENST00000616944 AMPHP49418 695 aa20.25■□□□□ 0.83
CBWD1-225ENST00000616944 IP6K1Q92551 441 aa20.25■□□□□ 0.83
CBWD1-225ENST00000616944 CAMTA1Q9Y6Y1 1673 aa20.25■□□□□ 0.83
CBWD1-225ENST00000616944 EIF4A2Q14240 407 aaKnown RBP20.24■□□□□ 0.83
CBWD1-225ENST00000616944 PLEKHG5O94827 1062 aa20.24■□□□□ 0.83
CBWD1-225ENST00000616944 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
CBWD1-225ENST00000616944 FAM208AQ9UK61 1670 aaKnown RBP20.23■□□□□ 0.83
CBWD1-225ENST00000616944 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
CBWD1-225ENST00000616944 KIAA0232Q92628 1395 aa20.22■□□□□ 0.83
CBWD1-225ENST00000616944 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
CBWD1-225ENST00000616944 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
CBWD1-225ENST00000616944 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
CBWD1-225ENST00000616944 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
CBWD1-225ENST00000616944 COL14A1Q05707 1796 aaKnown RBP20.19■□□□□ 0.82
CBWD1-225ENST00000616944 KDRP35968 1356 aa20.18■□□□□ 0.82
CBWD1-225ENST00000616944 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
CBWD1-225ENST00000616944 AXIN2Q9Y2T1 843 aa20.18■□□□□ 0.82
CBWD1-225ENST00000616944 NCAPD2Q15021 1401 aa20.18■□□□□ 0.82
CBWD1-225ENST00000616944 PLEKHF1Q96S99 279 aa20.16■□□□□ 0.82
CBWD1-225ENST00000616944 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
CBWD1-225ENST00000616944 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
CBWD1-225ENST00000616944 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
CBWD1-225ENST00000616944 FCHSD2O94868 740 aa20.16■□□□□ 0.82
CBWD1-225ENST00000616944 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
CBWD1-225ENST00000616944 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
CBWD1-225ENST00000616944 ERBB3P21860 1342 aa20.15■□□□□ 0.82
CBWD1-225ENST00000616944 JCADQ9P266 1359 aa20.15■□□□□ 0.82
CBWD1-225ENST00000616944 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.82
CBWD1-225ENST00000616944 CHRNA2Q15822 529 aa20.14■□□□□ 0.81
CBWD1-225ENST00000616944 RUNDC1Q96C34 613 aa20.14■□□□□ 0.81
CBWD1-225ENST00000616944 EYA1Q99502 592 aa20.14■□□□□ 0.81
CBWD1-225ENST00000616944 HAP1P54257 671 aaPredicted RBP20.13■□□□□ 0.81
CBWD1-225ENST00000616944 PRDM11Q9NQV5 511 aa20.13■□□□□ 0.81
CBWD1-225ENST00000616944 COL5A2P05997 1499 aaPredicted RBP20.13■□□□□ 0.81
CBWD1-225ENST00000616944 HMOX1P09601 288 aa20.13■□□□□ 0.81
CBWD1-225ENST00000616944 NRAPQ86VF7 1730 aa20.12■□□□□ 0.81
CBWD1-225ENST00000616944 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
CBWD1-225ENST00000616944 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
CBWD1-225ENST00000616944 NWD2Q9ULI1 1742 aa20.11■□□□□ 0.81
CBWD1-225ENST00000616944 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
CBWD1-225ENST00000616944 APAF1O14727 1248 aa20.1■□□□□ 0.81
CBWD1-225ENST00000616944 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
CBWD1-225ENST00000616944 SULT6B1Q6IMI4 303 aa20.1■□□□□ 0.81
CBWD1-225ENST00000616944 FAM83GA6ND36 823 aa20.09■□□□□ 0.81
CBWD1-225ENST00000616944 NBPF6Q5VWK0 638 aa20.09■□□□□ 0.81
CBWD1-225ENST00000616944 NBPF4Q96M43 638 aa20.09■□□□□ 0.81
CBWD1-225ENST00000616944 PNNQ9H307 717 aaKnown RBP20.09■□□□□ 0.81
CBWD1-225ENST00000616944 LRP6O75581 1613 aa20.08■□□□□ 0.81
CBWD1-225ENST00000616944 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.8
CBWD1-225ENST00000616944 TCP11L2Q8N4U5 519 aa20.08■□□□□ 0.8
CBWD1-225ENST00000616944 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
CBWD1-225ENST00000616944 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
CBWD1-225ENST00000616944 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
CBWD1-225ENST00000616944 ZNF521Q96K83 1311 aa20.06■□□□□ 0.8
CBWD1-225ENST00000616944 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
CBWD1-225ENST00000616944 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
CBWD1-225ENST00000616944 MAPK8IP3Q9UPT6 1336 aa20.05■□□□□ 0.8
CBWD1-225ENST00000616944 WDR17Q8IZU2 1322 aa20.05■□□□□ 0.8
CBWD1-225ENST00000616944 USHBP1Q8N6Y0 703 aa20.04■□□□□ 0.8
CBWD1-225ENST00000616944 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
CBWD1-225ENST00000616944 SLIT2O94813 1529 aa20.03■□□□□ 0.8
CBWD1-225ENST00000616944 TMPOP42166 694 aaKnown RBP20.03■□□□□ 0.8
CBWD1-225ENST00000616944 PKD1L3Q7Z443 1732 aa20.03■□□□□ 0.8
CBWD1-225ENST00000616944 PARP4Q9UKK3 1724 aaKnown RBP20.03■□□□□ 0.8
CBWD1-225ENST00000616944 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
CBWD1-225ENST00000616944 CCDC27Q2M243 656 aa20.02■□□□□ 0.79
CBWD1-225ENST00000616944 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.01■□□□□ 0.79
CBWD1-225ENST00000616944 NUTM2BA6NNL0 878 aaPredicted RBP20.01■□□□□ 0.79
CBWD1-225ENST00000616944 NUTM2EB1AL46 878 aaPredicted RBP20.01■□□□□ 0.79
CBWD1-225ENST00000616944 ADAMTS2O95450 1211 aa20.01■□□□□ 0.79
CBWD1-225ENST00000616944 NUTM2AQ8IVF1 878 aaPredicted RBP20.01■□□□□ 0.79
CBWD1-225ENST00000616944 PLEKHG2Q9H7P9 1386 aa20.01■□□□□ 0.79
CBWD1-225ENST00000616944 BTG4Q9NY30 223 aa20.01■□□□□ 0.79
CBWD1-225ENST00000616944 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
CBWD1-225ENST00000616944 SALL2Q9Y467 1007 aaPredicted RBP20.01■□□□□ 0.79
CBWD1-225ENST00000616944 CRB1P82279 1406 aa19.99■□□□□ 0.79
CBWD1-225ENST00000616944 NEFMP07197 916 aa19.99■□□□□ 0.79
CBWD1-225ENST00000616944 NFE2L2Q16236 605 aa19.99■□□□□ 0.79
CBWD1-225ENST00000616944 NLRP2Q9NX02 1062 aa19.99■□□□□ 0.79
CBWD1-225ENST00000616944 MEGF6O75095 1541 aa19.99■□□□□ 0.79
CBWD1-225ENST00000616944 CSB-PGBD3P0DP91 1061 aa19.98■□□□□ 0.79
CBWD1-225ENST00000616944 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
CBWD1-225ENST00000616944 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
CBWD1-225ENST00000616944 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
CBWD1-225ENST00000616944 TRIM35Q9UPQ4 493 aa19.98■□□□□ 0.79
CBWD1-225ENST00000616944 NEUROD2Q15784 382 aa19.97■□□□□ 0.79
CBWD1-225ENST00000616944 LARP1Q6PKG0 1096 aaKnown RBP19.97■□□□□ 0.79
CBWD1-225ENST00000616944 LRRC37A3O60309 1634 aa19.96■□□□□ 0.79
CBWD1-225ENST00000616944 RIPK4P57078 832 aa19.96■□□□□ 0.79
CBWD1-225ENST00000616944 PDE3BQ13370 1112 aa19.96■□□□□ 0.79
CBWD1-225ENST00000616944 CARD10Q9BWT7 1032 aa19.96■□□□□ 0.79
CBWD1-225ENST00000616944 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
CBWD1-225ENST00000616944 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
CBWD1-225ENST00000616944 STRN4Q9NRL3 753 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms