RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
UBXN1-218ENST00000616865 NLRP6P59044 892 aa21■□□□□ 0.95
UBXN1-218ENST00000616865 C11orf95C9JLR9 678 aaPredicted RBP20.99■□□□□ 0.95
UBXN1-218ENST00000616865 CPSF1Q10570 1443 aaKnown RBP20.98■□□□□ 0.95
UBXN1-218ENST00000616865 NBPF14Q5TI25 921 aa20.98■□□□□ 0.95
UBXN1-218ENST00000616865 RGPD5Q99666 1765 aa20.97■□□□□ 0.95
UBXN1-218ENST00000616865 EVC2Q86UK5 1308 aa20.97■□□□□ 0.95
UBXN1-218ENST00000616865 WDR17Q8IZU2 1322 aa20.95■□□□□ 0.94
UBXN1-218ENST00000616865 DDB1Q16531 1140 aa20.94■□□□□ 0.94
UBXN1-218ENST00000616865 TOM1L2Q6ZVM7 507 aa20.94■□□□□ 0.94
UBXN1-218ENST00000616865 MON2Q7Z3U7 1717 aa20.94■□□□□ 0.94
UBXN1-218ENST00000616865 ROCK2O75116 1388 aaKnown RBP20.93■□□□□ 0.94
UBXN1-218ENST00000616865 NFAT5O94916 1531 aa20.93■□□□□ 0.94
UBXN1-218ENST00000616865 AXIN2Q9Y2T1 843 aa20.92■□□□□ 0.94
UBXN1-218ENST00000616865 TTC21BQ7Z4L5 1316 aa20.92■□□□□ 0.94
UBXN1-218ENST00000616865 CASZ1Q86V15 1759 aa20.92■□□□□ 0.94
UBXN1-218ENST00000616865 ABCC6O95255 1503 aa20.91■□□□□ 0.94
UBXN1-218ENST00000616865 USP54Q70EL1 1684 aa20.9■□□□□ 0.94
UBXN1-218ENST00000616865 BCL9O00512 1426 aa20.9■□□□□ 0.94
UBXN1-218ENST00000616865 ARHGEF25Q86VW2 580 aa20.9■□□□□ 0.94
UBXN1-218ENST00000616865 KCNH5Q8NCM2 988 aa20.9■□□□□ 0.94
UBXN1-218ENST00000616865 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
UBXN1-218ENST00000616865 TTC21AQ8NDW8 1320 aa20.89■□□□□ 0.93
UBXN1-218ENST00000616865 PLSCR1O15162 318 aa20.89■□□□□ 0.93
UBXN1-218ENST00000616865 CDCA7Q9BWT1 371 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-218ENST00000616865 SPON1Q9HCB6 807 aa20.88■□□□□ 0.93
UBXN1-218ENST00000616865 BCL11BQ9C0K0 894 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-218ENST00000616865 SOX12O15370 315 aa20.86■□□□□ 0.93
UBXN1-218ENST00000616865 KCNQ2O43526 872 aa20.86■□□□□ 0.93
UBXN1-218ENST00000616865 MARCH10Q8NA82 808 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-218ENST00000616865 ANO8Q9HCE9 1232 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-218ENST00000616865 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
UBXN1-218ENST00000616865 NINLQ9Y2I6 1382 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 PTF1AQ7RTS3 328 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 CARD10Q9BWT7 1032 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 CARD11Q9BXL7 1154 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 PPP1R1BQ9UD71 204 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-218ENST00000616865 TNS2Q63HR2 1409 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 LTN1O94822 1766 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 SBNO2Q9Y2G9 1366 aa20.85■□□□□ 0.93
UBXN1-218ENST00000616865 CSB-PGBD3P0DP91 1061 aa20.84■□□□□ 0.93
UBXN1-218ENST00000616865 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
UBXN1-218ENST00000616865 NHSQ6T4R5 1651 aa20.83■□□□□ 0.93
UBXN1-218ENST00000616865 CD163L1Q9NR16 1453 aa20.81■□□□□ 0.92
UBXN1-218ENST00000616865 USP31Q70CQ4 1352 aa20.81■□□□□ 0.92
UBXN1-218ENST00000616865 MYOM1P52179 1685 aa20.8■□□□□ 0.92
UBXN1-218ENST00000616865 PROM2Q8N271 834 aa20.8■□□□□ 0.92
UBXN1-218ENST00000616865 ERBB3P21860 1342 aa20.78■□□□□ 0.92
UBXN1-218ENST00000616865 EXOC5O00471 708 aa20.77■□□□□ 0.92
UBXN1-218ENST00000616865 YY1P25490 414 aa20.77■□□□□ 0.92
UBXN1-218ENST00000616865 TXNRD1Q16881 649 aa20.76■□□□□ 0.91
UBXN1-218ENST00000616865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.76■□□□□ 0.91
UBXN1-218ENST00000616865 PDGFDQ9GZP0 370 aaPredicted RBP20.76■□□□□ 0.91
UBXN1-218ENST00000616865 PAPPAQ13219 1627 aa20.75■□□□□ 0.91
UBXN1-218ENST00000616865 NME9Q86XW9 330 aa20.74■□□□□ 0.91
UBXN1-218ENST00000616865 BTAF1O14981 1849 aa20.74■□□□□ 0.91
UBXN1-218ENST00000616865 EDC4Q6P2E9 1401 aaKnown RBP20.73■□□□□ 0.91
UBXN1-218ENST00000616865 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
UBXN1-218ENST00000616865 ZBTB7AO95365 584 aa20.73■□□□□ 0.91
UBXN1-218ENST00000616865 STK32BQ9NY57 414 aa20.73■□□□□ 0.91
UBXN1-218ENST00000616865 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
UBXN1-218ENST00000616865 USP47Q96K76 1375 aa20.72■□□□□ 0.91
UBXN1-218ENST00000616865 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBXN1-218ENST00000616865 SLC15A2Q16348 729 aa20.71■□□□□ 0.91
UBXN1-218ENST00000616865 A0A1W2PP64 1363 aa20.71■□□□□ 0.91
UBXN1-218ENST00000616865 IL2RBP14784 551 aa20.7■□□□□ 0.9
UBXN1-218ENST00000616865 PTGER2P43116 358 aa20.7■□□□□ 0.9
UBXN1-218ENST00000616865 HDGFL2Q7Z4V5 671 aaPredicted RBP20.7■□□□□ 0.9
UBXN1-218ENST00000616865 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
UBXN1-218ENST00000616865 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
UBXN1-218ENST00000616865 ANKRD24Q8TF21 1146 aa20.68■□□□□ 0.9
UBXN1-218ENST00000616865 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
UBXN1-218ENST00000616865 SLC12A5Q9H2X9 1139 aa20.67■□□□□ 0.9
UBXN1-218ENST00000616865 ATF5Q9Y2D1 282 aaPredicted RBP20.67■□□□□ 0.9
UBXN1-218ENST00000616865 MTFR1LQ9H019 292 aa20.66■□□□□ 0.9
UBXN1-218ENST00000616865 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
UBXN1-218ENST00000616865 ST20-MTHFSA0A0A6YYL1 179 aa20.65■□□□□ 0.9
UBXN1-218ENST00000616865 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
UBXN1-218ENST00000616865 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.9
UBXN1-218ENST00000616865 UTRNP46939 3433 aa20.63■□□□□ 0.89
UBXN1-218ENST00000616865 PUS7Q96PZ0 661 aaKnown RBP20.63■□□□□ 0.89
UBXN1-218ENST00000616865 SGIP1Q9BQI5 828 aa20.63■□□□□ 0.89
UBXN1-218ENST00000616865 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
UBXN1-218ENST00000616865 SHANK3Q9BYB0 1731 aa20.62■□□□□ 0.89
UBXN1-218ENST00000616865 FHDC1Q9C0D6 1143 aaPredicted RBP20.62■□□□□ 0.89
UBXN1-218ENST00000616865 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
UBXN1-218ENST00000616865 SYT17Q9BSW7 474 aa20.61■□□□□ 0.89
UBXN1-218ENST00000616865 RGPD2P0DJD1 1756 aa20.6■□□□□ 0.89
UBXN1-218ENST00000616865 IP6K1Q92551 441 aa20.6■□□□□ 0.89
UBXN1-218ENST00000616865 KAT6BQ8WYB5 2073 aa20.6■□□□□ 0.89
UBXN1-218ENST00000616865 ZNF827Q17R98 1081 aa20.59■□□□□ 0.89
UBXN1-218ENST00000616865 TUBGCP6Q96RT7 1819 aa20.59■□□□□ 0.89
UBXN1-218ENST00000616865 LY75O60449 1722 aa20.58■□□□□ 0.89
UBXN1-218ENST00000616865 LRRC4BQ9NT99 713 aa20.58■□□□□ 0.89
UBXN1-218ENST00000616865 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
UBXN1-218ENST00000616865 CHD4Q14839 1912 aa20.57■□□□□ 0.88
UBXN1-218ENST00000616865 TESK2Q96S53 571 aa20.57■□□□□ 0.88
UBXN1-218ENST00000616865 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
UBXN1-218ENST00000616865 TMF1P82094 1093 aa20.56■□□□□ 0.88
UBXN1-218ENST00000616865 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms