RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
MMP28-205ENST00000615317 SPATA31A6Q5VVP1 1343 aa12.34□□□□□ -0.43
MMP28-205ENST00000615317 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
MMP28-205ENST00000615317 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
MMP28-205ENST00000615317 PPM1GO15355 546 aaPredicted RBP12.32□□□□□ -0.44
MMP28-205ENST00000615317 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
MMP28-205ENST00000615317 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
MMP28-205ENST00000615317 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
MMP28-205ENST00000615317 CHRNA2Q15822 529 aa12.31□□□□□ -0.44
MMP28-205ENST00000615317 POLKQ9UBT6 870 aa12.3□□□□□ -0.44
MMP28-205ENST00000615317 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
MMP28-205ENST00000615317 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
MMP28-205ENST00000615317 SLIT2O94813 1529 aa12.29□□□□□ -0.44
MMP28-205ENST00000615317 HOXC9P31274 260 aa12.29□□□□□ -0.44
MMP28-205ENST00000615317 AMPHP49418 695 aa12.29□□□□□ -0.44
MMP28-205ENST00000615317 MTHFSP49914 203 aa12.29□□□□□ -0.44
MMP28-205ENST00000615317 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
MMP28-205ENST00000615317 MIER1Q8N108 512 aa12.29□□□□□ -0.44
MMP28-205ENST00000615317 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
MMP28-205ENST00000615317 CCDC184Q52MB2 194 aa12.27□□□□□ -0.45
MMP28-205ENST00000615317 C8orf37Q96NL8 207 aa12.27□□□□□ -0.45
MMP28-205ENST00000615317 INSRP06213 1382 aa12.27□□□□□ -0.45
MMP28-205ENST00000615317 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
MMP28-205ENST00000615317 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
MMP28-205ENST00000615317 MRS2Q9HD23 443 aa12.26□□□□□ -0.45
MMP28-205ENST00000615317 ERBB3P21860 1342 aa12.26□□□□□ -0.45
MMP28-205ENST00000615317 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
MMP28-205ENST00000615317 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
MMP28-205ENST00000615317 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
MMP28-205ENST00000615317 IP6K1Q92551 441 aa12.25□□□□□ -0.45
MMP28-205ENST00000615317 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
MMP28-205ENST00000615317 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
MMP28-205ENST00000615317 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
MMP28-205ENST00000615317 GLI3P10071 1580 aa12.24□□□□□ -0.45
MMP28-205ENST00000615317 VIRMAQ69YN4 1812 aaKnown RBP12.24□□□□□ -0.45
MMP28-205ENST00000615317 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
MMP28-205ENST00000615317 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
MMP28-205ENST00000615317 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
MMP28-205ENST00000615317 ANKRD24Q8TF21 1146 aa12.23□□□□□ -0.45
MMP28-205ENST00000615317 STRN4Q9NRL3 753 aa12.23□□□□□ -0.45
MMP28-205ENST00000615317 BCL9LQ86UU0 1499 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 CRB1P82279 1406 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 AFF2P51816 1311 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
MMP28-205ENST00000615317 MEGF6O75095 1541 aa12.21□□□□□ -0.45
MMP28-205ENST00000615317 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
MMP28-205ENST00000615317 CCER2I3L3R5 266 aa12.21□□□□□ -0.45
MMP28-205ENST00000615317 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
MMP28-205ENST00000615317 DIAPH1O60610 1272 aaKnown RBP12.21□□□□□ -0.45
MMP28-205ENST00000615317 USHBP1Q8N6Y0 703 aa12.21□□□□□ -0.45
MMP28-205ENST00000615317 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
MMP28-205ENST00000615317 IGSF1Q8N6C5 1336 aa12.2□□□□□ -0.46
MMP28-205ENST00000615317 IL13P35225 146 aa12.2□□□□□ -0.46
MMP28-205ENST00000615317 ATRNO75882 1429 aa12.2□□□□□ -0.46
MMP28-205ENST00000615317 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
MMP28-205ENST00000615317 LARP1Q6PKG0 1096 aaKnown RBP12.19□□□□□ -0.46
MMP28-205ENST00000615317 TOM1L2Q6ZVM7 507 aa12.18□□□□□ -0.46
MMP28-205ENST00000615317 AEBP1Q8IUX7 1158 aa12.18□□□□□ -0.46
MMP28-205ENST00000615317 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
MMP28-205ENST00000615317 USP21Q9UK80 565 aa12.18□□□□□ -0.46
MMP28-205ENST00000615317 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
MMP28-205ENST00000615317 KDRP35968 1356 aa12.18□□□□□ -0.46
MMP28-205ENST00000615317 HMOX1P09601 288 aa12.17□□□□□ -0.46
MMP28-205ENST00000615317 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
MMP28-205ENST00000615317 EVA1CP58658 441 aa12.17□□□□□ -0.46
MMP28-205ENST00000615317 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
MMP28-205ENST00000615317 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
MMP28-205ENST00000615317 EYA1Q99502 592 aa12.17□□□□□ -0.46
MMP28-205ENST00000615317 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
MMP28-205ENST00000615317 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
MMP28-205ENST00000615317 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
MMP28-205ENST00000615317 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
MMP28-205ENST00000615317 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
MMP28-205ENST00000615317 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
MMP28-205ENST00000615317 USP35Q9P2H5 1018 aa12.16□□□□□ -0.46
MMP28-205ENST00000615317 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
MMP28-205ENST00000615317 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
MMP28-205ENST00000615317 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
MMP28-205ENST00000615317 TNS2Q63HR2 1409 aa12.15□□□□□ -0.46
MMP28-205ENST00000615317 SULT6B1Q6IMI4 303 aa12.15□□□□□ -0.46
MMP28-205ENST00000615317 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
MMP28-205ENST00000615317 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
MMP28-205ENST00000615317 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
MMP28-205ENST00000615317 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
MMP28-205ENST00000615317 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
MMP28-205ENST00000615317 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
MMP28-205ENST00000615317 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
MMP28-205ENST00000615317 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
MMP28-205ENST00000615317 VPS72Q15906 364 aa12.13□□□□□ -0.47
MMP28-205ENST00000615317 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
MMP28-205ENST00000615317 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
MMP28-205ENST00000615317 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
MMP28-205ENST00000615317 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
MMP28-205ENST00000615317 ADAMTS8Q9UP79 889 aa12.12□□□□□ -0.47
MMP28-205ENST00000615317 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
MMP28-205ENST00000615317 SENP3-EIF4A1A0A087X0R7 540 aa12.11□□□□□ -0.47
MMP28-205ENST00000615317 RGS12O14924 1447 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms