RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
TARDBP-216ENST00000614494 BCL9O00512 1426 aa10.31□□□□□ -0.76
TARDBP-216ENST00000614494 CPSF1Q10570 1443 aaKnown RBP10.31□□□□□ -0.76
TARDBP-216ENST00000614494 NINLQ9Y2I6 1382 aa10.3□□□□□ -0.76
TARDBP-216ENST00000614494 APBA3O96018 575 aa10.3□□□□□ -0.76
TARDBP-216ENST00000614494 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
TARDBP-216ENST00000614494 PUS7Q96PZ0 661 aaKnown RBP10.3□□□□□ -0.76
TARDBP-216ENST00000614494 CCDC7Q96M83 1385 aa10.29□□□□□ -0.76
TARDBP-216ENST00000614494 SRCAPQ6ZRS2 3230 aa10.29□□□□□ -0.76
TARDBP-216ENST00000614494 NUTM2GQ5VZR2 741 aa10.29□□□□□ -0.76
TARDBP-216ENST00000614494 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
TARDBP-216ENST00000614494 CAMKK2Q96RR4 588 aa10.29□□□□□ -0.76
TARDBP-216ENST00000614494 USP35Q9P2H5 1018 aa10.29□□□□□ -0.76
TARDBP-216ENST00000614494 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
TARDBP-216ENST00000614494 TRIM37O94972 964 aa10.28□□□□□ -0.76
TARDBP-216ENST00000614494 DDB1Q16531 1140 aa10.28□□□□□ -0.76
TARDBP-216ENST00000614494 RBM42Q9BTD8 480 aaKnown RBP10.28□□□□□ -0.76
TARDBP-216ENST00000614494 PIK3C2AO00443 1686 aa10.28□□□□□ -0.76
TARDBP-216ENST00000614494 RREB1Q92766 1687 aa10.28□□□□□ -0.76
TARDBP-216ENST00000614494 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.76
TARDBP-216ENST00000614494 TOM1L2Q6ZVM7 507 aa10.27□□□□□ -0.77
TARDBP-216ENST00000614494 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-216ENST00000614494 TTC21BQ7Z4L5 1316 aa10.27□□□□□ -0.77
TARDBP-216ENST00000614494 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 USP54Q70EL1 1684 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 PLSCR1O15162 318 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 R3HDM1Q15032 1099 aaKnown RBP10.26□□□□□ -0.77
TARDBP-216ENST00000614494 HDGFL2Q7Z4V5 671 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-216ENST00000614494 ARHGEF25Q86VW2 580 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 CARD10Q9BWT7 1032 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 TERF2IPQ9NYB0 399 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-216ENST00000614494 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
TARDBP-216ENST00000614494 LRRC37A3O60309 1634 aa10.25□□□□□ -0.77
TARDBP-216ENST00000614494 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-216ENST00000614494 EZH2Q15910 746 aaKnown RBP10.25□□□□□ -0.77
TARDBP-216ENST00000614494 CARD11Q9BXL7 1154 aa10.25□□□□□ -0.77
TARDBP-216ENST00000614494 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-216ENST00000614494 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
TARDBP-216ENST00000614494 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
TARDBP-216ENST00000614494 CSB-PGBD3P0DP91 1061 aa10.24□□□□□ -0.77
TARDBP-216ENST00000614494 HMGB2P26583 209 aaKnown RBP10.24□□□□□ -0.77
TARDBP-216ENST00000614494 FAM182BQ5T319 152 aa10.24□□□□□ -0.77
TARDBP-216ENST00000614494 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
TARDBP-216ENST00000614494 NFAT5O94916 1531 aa10.23□□□□□ -0.77
TARDBP-216ENST00000614494 NUP188Q5SRE5 1749 aa10.23□□□□□ -0.77
TARDBP-216ENST00000614494 PEAK1Q9H792 1746 aa10.23□□□□□ -0.77
TARDBP-216ENST00000614494 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
TARDBP-216ENST00000614494 COL18A1P39060 1754 aa10.22□□□□□ -0.77
TARDBP-216ENST00000614494 ZBTB7CA1YPR0 619 aa10.22□□□□□ -0.77
TARDBP-216ENST00000614494 EXOC5O00471 708 aa10.22□□□□□ -0.77
TARDBP-216ENST00000614494 NEUROD1Q13562 356 aa10.22□□□□□ -0.77
TARDBP-216ENST00000614494 SPON1Q9HCB6 807 aa10.22□□□□□ -0.77
TARDBP-216ENST00000614494 ERBB3P21860 1342 aa10.21□□□□□ -0.78
TARDBP-216ENST00000614494 KCNA4P22459 653 aa10.2□□□□□ -0.78
TARDBP-216ENST00000614494 SIN3AQ96ST3 1273 aa10.2□□□□□ -0.78
TARDBP-216ENST00000614494 PPP1R1BQ9UD71 204 aaPredicted RBP10.2□□□□□ -0.78
TARDBP-216ENST00000614494 FAM208AQ9UK61 1670 aaKnown RBP10.2□□□□□ -0.78
TARDBP-216ENST00000614494 KCNQ2O43526 872 aa10.19□□□□□ -0.78
TARDBP-216ENST00000614494 CDCA8Q53HL2 280 aa10.19□□□□□ -0.78
TARDBP-216ENST00000614494 RTL1A6NKG5 1358 aa10.18□□□□□ -0.78
TARDBP-216ENST00000614494 IL2RBP14784 551 aa10.18□□□□□ -0.78
TARDBP-216ENST00000614494 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
TARDBP-216ENST00000614494 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
TARDBP-216ENST00000614494 CD163L1Q9NR16 1453 aa10.17□□□□□ -0.78
TARDBP-216ENST00000614494 A0A1W2PP64 1363 aa10.17□□□□□ -0.78
TARDBP-216ENST00000614494 STK32BQ9NY57 414 aa10.17□□□□□ -0.78
TARDBP-216ENST00000614494 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
TARDBP-216ENST00000614494 NHSQ6T4R5 1651 aa10.16□□□□□ -0.78
TARDBP-216ENST00000614494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.16□□□□□ -0.78
TARDBP-216ENST00000614494 MARCH10Q8NA82 808 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-216ENST00000614494 COG3Q96JB2 828 aa10.16□□□□□ -0.78
TARDBP-216ENST00000614494 NLRP2Q9NX02 1062 aa10.16□□□□□ -0.78
TARDBP-216ENST00000614494 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
TARDBP-216ENST00000614494 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
TARDBP-216ENST00000614494 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
TARDBP-216ENST00000614494 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
TARDBP-216ENST00000614494 CGNL1Q0VF96 1302 aa10.15□□□□□ -0.78
TARDBP-216ENST00000614494 SOX12O15370 315 aa10.15□□□□□ -0.78
TARDBP-216ENST00000614494 LTN1O94822 1766 aa10.14□□□□□ -0.79
TARDBP-216ENST00000614494 TMF1P82094 1093 aa10.14□□□□□ -0.79
TARDBP-216ENST00000614494 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
TARDBP-216ENST00000614494 SLC27A3Q5K4L6 730 aa10.14□□□□□ -0.79
TARDBP-216ENST00000614494 ANKRD24Q8TF21 1146 aa10.14□□□□□ -0.79
TARDBP-216ENST00000614494 IP6K1Q92551 441 aa10.14□□□□□ -0.79
TARDBP-216ENST00000614494 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
TARDBP-216ENST00000614494 NME9Q86XW9 330 aa10.13□□□□□ -0.79
TARDBP-216ENST00000614494 MTFR1LQ9H019 292 aa10.13□□□□□ -0.79
TARDBP-216ENST00000614494 CASZ1Q86V15 1759 aa10.13□□□□□ -0.79
TARDBP-216ENST00000614494 SLC15A2Q16348 729 aa10.12□□□□□ -0.79
TARDBP-216ENST00000614494 TESK2Q96S53 571 aa10.12□□□□□ -0.79
TARDBP-216ENST00000614494 SLC12A5Q9H2X9 1139 aa10.12□□□□□ -0.79
TARDBP-216ENST00000614494 MAP3K5Q99683 1374 aa10.12□□□□□ -0.79
TARDBP-216ENST00000614494 RGPD5Q99666 1765 aa10.11□□□□□ -0.79
TARDBP-216ENST00000614494 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
TARDBP-216ENST00000614494 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
TARDBP-216ENST00000614494 ST20-MTHFSA0A0A6YYL1 179 aa10.1□□□□□ -0.79
TARDBP-216ENST00000614494 AMPHP49418 695 aa10.1□□□□□ -0.79
TARDBP-216ENST00000614494 TRIM26Q12899 539 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms