RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 MEX3CQ5U5Q3 659 aaKnown RBP19.74■□□□□ 0.75
CD48-203ENST00000613788 INSRP06213 1382 aa19.74■□□□□ 0.75
CD48-203ENST00000613788 CDK12Q9NYV4 1490 aaPredicted RBP19.74■□□□□ 0.75
CD48-203ENST00000613788 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
CD48-203ENST00000613788 AXIN2Q9Y2T1 843 aa19.72■□□□□ 0.75
CD48-203ENST00000613788 LTN1O94822 1766 aa19.72■□□□□ 0.75
CD48-203ENST00000613788 ABCC6O95255 1503 aa19.72■□□□□ 0.75
CD48-203ENST00000613788 DIAPH1O60610 1272 aaKnown RBP19.71■□□□□ 0.75
CD48-203ENST00000613788 NGLY1Q96IV0 654 aa19.71■□□□□ 0.75
CD48-203ENST00000613788 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
CD48-203ENST00000613788 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
CD48-203ENST00000613788 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
CD48-203ENST00000613788 LRP6O75581 1613 aa19.7■□□□□ 0.74
CD48-203ENST00000613788 EVA1CP58658 441 aa19.7■□□□□ 0.74
CD48-203ENST00000613788 ILDR1Q86SU0 546 aaPredicted RBP19.7■□□□□ 0.74
CD48-203ENST00000613788 BTG4Q9NY30 223 aa19.7■□□□□ 0.74
CD48-203ENST00000613788 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
CD48-203ENST00000613788 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
CD48-203ENST00000613788 COL14A1Q05707 1796 aaKnown RBP19.69■□□□□ 0.74
CD48-203ENST00000613788 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
CD48-203ENST00000613788 CCDC184Q52MB2 194 aa19.68■□□□□ 0.74
CD48-203ENST00000613788 LTV1Q96GA3 475 aaPredicted RBP19.68■□□□□ 0.74
CD48-203ENST00000613788 COL18A1P39060 1754 aa19.67■□□□□ 0.74
CD48-203ENST00000613788 IL13P35225 146 aa19.67■□□□□ 0.74
CD48-203ENST00000613788 CAMTA1Q9Y6Y1 1673 aa19.67■□□□□ 0.74
CD48-203ENST00000613788 CSB-PGBD3P0DP91 1061 aa19.66■□□□□ 0.74
CD48-203ENST00000613788 FNBP4Q8N3X1 1017 aaPredicted RBP19.66■□□□□ 0.74
CD48-203ENST00000613788 ERBB3P21860 1342 aa19.66■□□□□ 0.74
CD48-203ENST00000613788 LMO7Q8WWI1 1683 aa19.65■□□□□ 0.74
CD48-203ENST00000613788 COL3A1P02461 1466 aaPredicted RBP19.65■□□□□ 0.74
CD48-203ENST00000613788 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
CD48-203ENST00000613788 STRN4Q9NRL3 753 aa19.65■□□□□ 0.74
CD48-203ENST00000613788 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
CD48-203ENST00000613788 COL5A2P05997 1499 aaPredicted RBP19.64■□□□□ 0.73
CD48-203ENST00000613788 SLIT2O94813 1529 aa19.64■□□□□ 0.73
CD48-203ENST00000613788 UNC5CLQ8IV45 518 aa19.63■□□□□ 0.73
CD48-203ENST00000613788 WDR17Q8IZU2 1322 aa19.63■□□□□ 0.73
CD48-203ENST00000613788 PNISRQ8TF01 805 aaKnown RBP19.62■□□□□ 0.73
CD48-203ENST00000613788 USP21Q9UK80 565 aa19.62■□□□□ 0.73
CD48-203ENST00000613788 TOM1L2Q6ZVM7 507 aa19.61■□□□□ 0.73
CD48-203ENST00000613788 EYA1Q99502 592 aa19.61■□□□□ 0.73
CD48-203ENST00000613788 NLRP2Q9NX02 1062 aa19.61■□□□□ 0.73
CD48-203ENST00000613788 AFF2P51816 1311 aa19.61■□□□□ 0.73
CD48-203ENST00000613788 U2AF1L5P0DN76 240 aaPredicted RBP19.61■□□□□ 0.73
CD48-203ENST00000613788 U2AF1Q01081 240 aaKnown RBP eCLIP19.61■□□□□ 0.73
CD48-203ENST00000613788 RGPD5Q99666 1765 aa19.6■□□□□ 0.73
CD48-203ENST00000613788 NBPF6Q5VWK0 638 aa19.6■□□□□ 0.73
CD48-203ENST00000613788 LARP1Q6PKG0 1096 aaKnown RBP19.6■□□□□ 0.73
CD48-203ENST00000613788 NBPF4Q96M43 638 aa19.6■□□□□ 0.73
CD48-203ENST00000613788 NWD2Q9ULI1 1742 aa19.6■□□□□ 0.73
CD48-203ENST00000613788 PLCH1Q4KWH8 1693 aa19.6■□□□□ 0.73
CD48-203ENST00000613788 IGSF1Q8N6C5 1336 aa19.59■□□□□ 0.73
CD48-203ENST00000613788 CARD10Q9BWT7 1032 aa19.59■□□□□ 0.73
CD48-203ENST00000613788 BCL9LQ86UU0 1499 aa19.59■□□□□ 0.73
CD48-203ENST00000613788 CRB1P82279 1406 aa19.58■□□□□ 0.72
CD48-203ENST00000613788 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
CD48-203ENST00000613788 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
CD48-203ENST00000613788 PNNQ9H307 717 aaKnown RBP19.57■□□□□ 0.72
CD48-203ENST00000613788 ADAMTS8Q9UP79 889 aa19.57■□□□□ 0.72
CD48-203ENST00000613788 FCHSD2O94868 740 aa19.56■□□□□ 0.72
CD48-203ENST00000613788 VPS72Q15906 364 aa19.56■□□□□ 0.72
CD48-203ENST00000613788 ZNF772Q68DY9 489 aaPredicted RBP19.56■□□□□ 0.72
CD48-203ENST00000613788 CCDC9Q9Y3X0 531 aaKnown RBP19.56■□□□□ 0.72
CD48-203ENST00000613788 HMOX1P09601 288 aa19.55■□□□□ 0.72
CD48-203ENST00000613788 USHBP1Q8N6Y0 703 aa19.55■□□□□ 0.72
CD48-203ENST00000613788 TRPC5Q9UL62 973 aaPredicted RBP19.55■□□□□ 0.72
CD48-203ENST00000613788 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
CD48-203ENST00000613788 THRAP3Q9Y2W1 955 aaKnown RBP19.54■□□□□ 0.72
CD48-203ENST00000613788 NRAPQ86VF7 1730 aa19.53■□□□□ 0.72
CD48-203ENST00000613788 SPATA31A1Q5TZJ5 1347 aa19.53■□□□□ 0.72
CD48-203ENST00000613788 SPATA31A5Q5VU36 1347 aa19.53■□□□□ 0.72
CD48-203ENST00000613788 SPATA31A7Q8IWB4 1347 aa19.53■□□□□ 0.72
CD48-203ENST00000613788 USP35Q9P2H5 1018 aa19.53■□□□□ 0.72
CD48-203ENST00000613788 KDRP35968 1356 aa19.53■□□□□ 0.72
CD48-203ENST00000613788 NEFMP07197 916 aa19.52■□□□□ 0.72
CD48-203ENST00000613788 AEBP1Q8IUX7 1158 aa19.52■□□□□ 0.72
CD48-203ENST00000613788 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
CD48-203ENST00000613788 RAPGEF4Q8WZA2 1011 aa19.52■□□□□ 0.72
CD48-203ENST00000613788 QTRT2Q9H974 415 aaKnown RBP19.52■□□□□ 0.72
CD48-203ENST00000613788 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.72
CD48-203ENST00000613788 NCAPD2Q15021 1401 aa19.52■□□□□ 0.71
CD48-203ENST00000613788 RSPH6AQ9H0K4 717 aa19.51■□□□□ 0.71
CD48-203ENST00000613788 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.51■□□□□ 0.71
CD48-203ENST00000613788 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
CD48-203ENST00000613788 TATP17735 454 aaPredicted RBP19.5■□□□□ 0.71
CD48-203ENST00000613788 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
CD48-203ENST00000613788 GJD4Q96KN9 370 aaPredicted RBP19.5■□□□□ 0.71
CD48-203ENST00000613788 IL2RBP14784 551 aa19.49■□□□□ 0.71
CD48-203ENST00000613788 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
CD48-203ENST00000613788 CDCA7Q9BWT1 371 aaPredicted RBP19.49■□□□□ 0.71
CD48-203ENST00000613788 ATRNO75882 1429 aa19.49■□□□□ 0.71
CD48-203ENST00000613788 RGPD2P0DJD1 1756 aa19.48■□□□□ 0.71
CD48-203ENST00000613788 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
CD48-203ENST00000613788 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
CD48-203ENST00000613788 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
CD48-203ENST00000613788 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
CD48-203ENST00000613788 PLEKHG2Q9H7P9 1386 aa19.46■□□□□ 0.71
CD48-203ENST00000613788 AMOTQ4VCS5 1084 aa19.46■□□□□ 0.71
CD48-203ENST00000613788 PLEKHO1Q53GL0 409 aaPredicted RBP19.46■□□□□ 0.71
CD48-203ENST00000613788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms