RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
TMEM254-213ENST00000613758 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
TMEM254-213ENST00000613758 PHRF1Q9P1Y6 1649 aaKnown RBP18.29■□□□□ 0.52
TMEM254-213ENST00000613758 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
TMEM254-213ENST00000613758 LTN1O94822 1766 aa18.28■□□□□ 0.52
TMEM254-213ENST00000613758 CRYBG1Q9Y4K1 1723 aa18.28■□□□□ 0.52
TMEM254-213ENST00000613758 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
TMEM254-213ENST00000613758 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.52
TMEM254-213ENST00000613758 COL16A1Q07092 1604 aaPredicted RBP18.26■□□□□ 0.51
TMEM254-213ENST00000613758 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
TMEM254-213ENST00000613758 LTV1Q96GA3 475 aaPredicted RBP18.25■□□□□ 0.51
TMEM254-213ENST00000613758 CPDO75976 1380 aa18.25■□□□□ 0.51
TMEM254-213ENST00000613758 KIAA0232Q92628 1395 aa18.25■□□□□ 0.51
TMEM254-213ENST00000613758 FCHSD2O94868 740 aa18.24■□□□□ 0.51
TMEM254-213ENST00000613758 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
TMEM254-213ENST00000613758 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
TMEM254-213ENST00000613758 HMOX1P09601 288 aa18.24■□□□□ 0.51
TMEM254-213ENST00000613758 CHRNA2Q15822 529 aa18.24■□□□□ 0.51
TMEM254-213ENST00000613758 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
TMEM254-213ENST00000613758 EYA1Q99502 592 aa18.23■□□□□ 0.51
TMEM254-213ENST00000613758 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
TMEM254-213ENST00000613758 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
TMEM254-213ENST00000613758 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
TMEM254-213ENST00000613758 APAF1O14727 1248 aa18.21■□□□□ 0.51
TMEM254-213ENST00000613758 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
TMEM254-213ENST00000613758 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
TMEM254-213ENST00000613758 COL22A1Q8NFW1 1626 aaPredicted RBP18.21■□□□□ 0.51
TMEM254-213ENST00000613758 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
TMEM254-213ENST00000613758 ABCA3Q99758 1704 aa18.21■□□□□ 0.51
TMEM254-213ENST00000613758 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
TMEM254-213ENST00000613758 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
TMEM254-213ENST00000613758 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
TMEM254-213ENST00000613758 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
TMEM254-213ENST00000613758 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
TMEM254-213ENST00000613758 COL18A1P39060 1754 aa18.19■□□□□ 0.5
TMEM254-213ENST00000613758 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
TMEM254-213ENST00000613758 ABCC6O95255 1503 aa18.18■□□□□ 0.5
TMEM254-213ENST00000613758 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
TMEM254-213ENST00000613758 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
TMEM254-213ENST00000613758 NEFMP07197 916 aa18.17■□□□□ 0.5
TMEM254-213ENST00000613758 NBPF6Q5VWK0 638 aa18.17■□□□□ 0.5
TMEM254-213ENST00000613758 NBPF4Q96M43 638 aa18.17■□□□□ 0.5
TMEM254-213ENST00000613758 HSPA1LP34931 641 aa18.17■□□□□ 0.5
TMEM254-213ENST00000613758 JCADQ9P266 1359 aa18.17■□□□□ 0.5
TMEM254-213ENST00000613758 ERBB3P21860 1342 aa18.16■□□□□ 0.5
TMEM254-213ENST00000613758 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
TMEM254-213ENST00000613758 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
TMEM254-213ENST00000613758 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
TMEM254-213ENST00000613758 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
TMEM254-213ENST00000613758 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
TMEM254-213ENST00000613758 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
TMEM254-213ENST00000613758 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
TMEM254-213ENST00000613758 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
TMEM254-213ENST00000613758 KDRP35968 1356 aa18.14■□□□□ 0.5
TMEM254-213ENST00000613758 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.49
TMEM254-213ENST00000613758 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
TMEM254-213ENST00000613758 CAMTA1Q9Y6Y1 1673 aa18.13■□□□□ 0.49
TMEM254-213ENST00000613758 ADAMTS2O95450 1211 aa18.13■□□□□ 0.49
TMEM254-213ENST00000613758 NLRP2Q9NX02 1062 aa18.13■□□□□ 0.49
TMEM254-213ENST00000613758 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
TMEM254-213ENST00000613758 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
TMEM254-213ENST00000613758 EVA1CP58658 441 aa18.11■□□□□ 0.49
TMEM254-213ENST00000613758 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
TMEM254-213ENST00000613758 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
TMEM254-213ENST00000613758 BTG4Q9NY30 223 aa18.1■□□□□ 0.49
TMEM254-213ENST00000613758 RGPD2P0DJD1 1756 aa18.1■□□□□ 0.49
TMEM254-213ENST00000613758 RIPK4P57078 832 aa18.1■□□□□ 0.49
TMEM254-213ENST00000613758 STRN4Q9NRL3 753 aa18.1■□□□□ 0.49
TMEM254-213ENST00000613758 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
TMEM254-213ENST00000613758 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
TMEM254-213ENST00000613758 SPATA31A6Q5VVP1 1343 aa18.09■□□□□ 0.49
TMEM254-213ENST00000613758 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
TMEM254-213ENST00000613758 COL5A2P05997 1499 aaPredicted RBP18.09■□□□□ 0.49
TMEM254-213ENST00000613758 COL14A1Q05707 1796 aaKnown RBP18.09■□□□□ 0.49
TMEM254-213ENST00000613758 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
TMEM254-213ENST00000613758 WWC1Q8IX03 1113 aa18.08■□□□□ 0.49
TMEM254-213ENST00000613758 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
TMEM254-213ENST00000613758 TOM1L2Q6ZVM7 507 aa18.07■□□□□ 0.48
TMEM254-213ENST00000613758 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
TMEM254-213ENST00000613758 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
TMEM254-213ENST00000613758 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
TMEM254-213ENST00000613758 MTHFSDQ2M296 383 aaKnown RBP18.06■□□□□ 0.48
TMEM254-213ENST00000613758 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
TMEM254-213ENST00000613758 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
TMEM254-213ENST00000613758 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
TMEM254-213ENST00000613758 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
TMEM254-213ENST00000613758 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
TMEM254-213ENST00000613758 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
TMEM254-213ENST00000613758 WDR63Q8IWG1 891 aa18.03■□□□□ 0.48
TMEM254-213ENST00000613758 PLEKHO1Q53GL0 409 aaPredicted RBP18.03■□□□□ 0.48
TMEM254-213ENST00000613758 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
TMEM254-213ENST00000613758 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
TMEM254-213ENST00000613758 NGLY1Q96IV0 654 aa18.02■□□□□ 0.48
TMEM254-213ENST00000613758 AMOTQ4VCS5 1084 aa18.01■□□□□ 0.47
TMEM254-213ENST00000613758 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
TMEM254-213ENST00000613758 CRB1P82279 1406 aa18.01■□□□□ 0.47
TMEM254-213ENST00000613758 LRP6O75581 1613 aa18.01■□□□□ 0.47
TMEM254-213ENST00000613758 SLFN5Q08AF3 891 aa18■□□□□ 0.47
TMEM254-213ENST00000613758 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
TMEM254-213ENST00000613758 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms