RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 SLC20A2Q08357 652 aa7.16□□□□□ -1.26
CCL16-206ENST00000613642 NFX1Q12986 1120 aaKnown RBP7.16□□□□□ -1.26
CCL16-206ENST00000613642 HSP90AB3PQ58FF7 597 aa7.16□□□□□ -1.26
CCL16-206ENST00000613642 CCDC102AQ96A19 550 aa7.16□□□□□ -1.26
CCL16-206ENST00000613642 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
CCL16-206ENST00000613642 NRDCO43847 1150 aa7.15□□□□□ -1.26
CCL16-206ENST00000613642 WNT7BP56706 349 aa7.15□□□□□ -1.26
CCL16-206ENST00000613642 RC3H1Q5TC82 1133 aaKnown RBP7.15□□□□□ -1.26
CCL16-206ENST00000613642 TMTC2Q8N394 836 aa7.15□□□□□ -1.26
CCL16-206ENST00000613642 CCDC24Q8N4L8 307 aa7.15□□□□□ -1.26
CCL16-206ENST00000613642 CARD10Q9BWT7 1032 aa7.15□□□□□ -1.26
CCL16-206ENST00000613642 ATP13A2Q9NQ11 1180 aa7.15□□□□□ -1.26
CCL16-206ENST00000613642 FAM217BQ9NTX9 383 aaPredicted RBP7.15□□□□□ -1.26
CCL16-206ENST00000613642 TPM2P07951 284 aa7.14□□□□□ -1.27
CCL16-206ENST00000613642 JUNDP17535 347 aa7.14□□□□□ -1.27
CCL16-206ENST00000613642 CLCN1P35523 988 aa7.14□□□□□ -1.27
CCL16-206ENST00000613642 GUCA2AQ02747 115 aa7.14□□□□□ -1.27
CCL16-206ENST00000613642 RALBP1Q15311 655 aa7.14□□□□□ -1.27
CCL16-206ENST00000613642 SYMPKQ92797 1274 aaKnown RBP7.14□□□□□ -1.27
CCL16-206ENST00000613642 HPS1Q92902 700 aa7.14□□□□□ -1.27
CCL16-206ENST00000613642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.14□□□□□ -1.27
CCL16-206ENST00000613642 GOLGA6L3A6NEY3 463 aa7.13□□□□□ -1.27
CCL16-206ENST00000613642 KIF20AO95235 890 aa7.13□□□□□ -1.27
CCL16-206ENST00000613642 FAM50AQ14320 339 aaKnown RBP7.13□□□□□ -1.27
CCL16-206ENST00000613642 NBPF9Q3BBW0 867 aa7.13□□□□□ -1.27
CCL16-206ENST00000613642 TSHZ1Q6ZSZ6 1077 aa7.13□□□□□ -1.27
CCL16-206ENST00000613642 EGFL6Q8IUX8 553 aa7.13□□□□□ -1.27
CCL16-206ENST00000613642 MTMR7Q9Y216 660 aa7.13□□□□□ -1.27
CCL16-206ENST00000613642 SNRPBP14678 240 aaKnown RBP7.12□□□□□ -1.27
CCL16-206ENST00000613642 RETREG3Q86VR2 466 aa7.12□□□□□ -1.27
CCL16-206ENST00000613642 TRIM47Q96LD4 638 aa7.12□□□□□ -1.27
CCL16-206ENST00000613642 SENP2Q9HC62 589 aa7.12□□□□□ -1.27
CCL16-206ENST00000613642 SIAH2O43255 324 aa7.11□□□□□ -1.27
CCL16-206ENST00000613642 WIPF1O43516 503 aa7.11□□□□□ -1.27
CCL16-206ENST00000613642 PTCRAQ6ISU1 281 aaPredicted RBP7.11□□□□□ -1.27
CCL16-206ENST00000613642 MTERF4Q7Z6M4 381 aaKnown RBP7.11□□□□□ -1.27
CCL16-206ENST00000613642 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
CCL16-206ENST00000613642 GEMIN8Q9NWZ8 242 aaKnown RBP7.11□□□□□ -1.27
CCL16-206ENST00000613642 E9PSI1 815 aa7.1□□□□□ -1.27
CCL16-206ENST00000613642 CALRP27797 417 aaKnown RBP7.1□□□□□ -1.27
CCL16-206ENST00000613642 SSR1P43307 286 aaKnown RBP7.1□□□□□ -1.27
CCL16-206ENST00000613642 SPTY2D1Q68D10 685 aaPredicted RBP7.1□□□□□ -1.27
CCL16-206ENST00000613642 OTUD6BQ8N6M0 293 aa7.1□□□□□ -1.27
CCL16-206ENST00000613642 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCL16-206ENST00000613642 NUDT12Q9BQG2 462 aa7.1□□□□□ -1.27
CCL16-206ENST00000613642 SLC52A1Q9NWF4 448 aa7.1□□□□□ -1.27
CCL16-206ENST00000613642 PCDHGC3Q9UN70 934 aa7.1□□□□□ -1.27
CCL16-206ENST00000613642 SH3BP1Q9Y3L3 701 aa7.1□□□□□ -1.27
CCL16-206ENST00000613642 LOC102724159A0A0B4J2E5 919 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 GOLIM4O00461 696 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 SETDB1Q15047 1291 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 PWP2Q15269 919 aaKnown RBP7.09□□□□□ -1.27
CCL16-206ENST00000613642 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 RINLQ6ZS11 566 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCL16-206ENST00000613642 KIFC2Q96AC6 838 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 BSDC1Q9NW68 430 aaPredicted RBP7.09□□□□□ -1.27
CCL16-206ENST00000613642 TERF2IPQ9NYB0 399 aa7.09□□□□□ -1.27
CCL16-206ENST00000613642 RB1CC1Q8TDY2 1594 aa7.08□□□□□ -1.28
CCL16-206ENST00000613642 TERTO14746 1132 aaKnown RBP7.08□□□□□ -1.28
CCL16-206ENST00000613642 FDX1P10109 184 aa7.08□□□□□ -1.28
CCL16-206ENST00000613642 DNTTIP2Q5QJE6 756 aaKnown RBP7.08□□□□□ -1.28
CCL16-206ENST00000613642 CCDC125Q86Z20 511 aa7.08□□□□□ -1.28
CCL16-206ENST00000613642 FAM9BQ8IZU0 186 aa7.08□□□□□ -1.28
CCL16-206ENST00000613642 ALDH1A1P00352 501 aa7.07□□□□□ -1.28
CCL16-206ENST00000613642 SSTR3P32745 418 aaPredicted RBP7.07□□□□□ -1.28
CCL16-206ENST00000613642 HDAC1Q13547 482 aaPredicted RBP7.07□□□□□ -1.28
CCL16-206ENST00000613642 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
CCL16-206ENST00000613642 SPIRE2Q8WWL2 714 aa7.07□□□□□ -1.28
CCL16-206ENST00000613642 ZNF428Q96B54 188 aa7.07□□□□□ -1.28
CCL16-206ENST00000613642 PNNQ9H307 717 aaKnown RBP7.07□□□□□ -1.28
CCL16-206ENST00000613642 RBM28Q9NW13 759 aaKnown RBP7.07□□□□□ -1.28
CCL16-206ENST00000613642 RAI14Q9P0K7 980 aa7.07□□□□□ -1.28
CCL16-206ENST00000613642 LETM1O95202 739 aaPredicted RBP7.06□□□□□ -1.28
CCL16-206ENST00000613642 SH3BP2P78314 561 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 DMTNQ08495 405 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 FOXD4L5Q5VV16 416 aaPredicted RBP7.06□□□□□ -1.28
CCL16-206ENST00000613642 NBPF6Q5VWK0 638 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 NBPF5PQ86XG9 351 aaPredicted RBP7.06□□□□□ -1.28
CCL16-206ENST00000613642 EHBP1Q8NDI1 1231 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 FOXD4L4Q8WXT5 416 aaPredicted RBP7.06□□□□□ -1.28
CCL16-206ENST00000613642 MKL1Q969V6 931 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 DDRGK1Q96HY6 314 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 NBPF4Q96M43 638 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 EVA1BQ9NVM1 165 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 RIPOR2Q9Y4F9 1068 aa7.06□□□□□ -1.28
CCL16-206ENST00000613642 HMGB1P1B2RPK0 211 aaPredicted RBP7.05□□□□□ -1.28
CCL16-206ENST00000613642 C6orf229H3BNL8 230 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 CCNYL3P0C7X3 344 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 MS4A1P11836 297 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 ERCC3P19447 782 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
CCL16-206ENST00000613642 PTPRNQ16849 979 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 NBPF10Q6P3W6 841 aaKnown RBP7.05□□□□□ -1.28
CCL16-206ENST00000613642 GTPBP4Q9BZE4 634 aaKnown RBP7.05□□□□□ -1.28
CCL16-206ENST00000613642 STK17AQ9UEE5 414 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 CADPSQ9ULU8 1353 aa7.05□□□□□ -1.28
CCL16-206ENST00000613642 NDUFV2P19404 249 aa7.04□□□□□ -1.28
CCL16-206ENST00000613642 MYBPC2Q14324 1141 aa7.04□□□□□ -1.28
CCL16-206ENST00000613642 ZKSCAN8Q15776 578 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms