RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 KCNQ2O43526 872 aa33.95■■■■□ 3.03
MMP28-203ENST00000612672 DDB1Q16531 1140 aa33.94■■■■□ 3.02
MMP28-203ENST00000612672 PDGFDQ9GZP0 370 aaPredicted RBP33.94■■■■□ 3.02
MMP28-203ENST00000612672 SPON1Q9HCB6 807 aa33.94■■■■□ 3.02
MMP28-203ENST00000612672 TOM1L2Q6ZVM7 507 aa33.93■■■■□ 3.02
MMP28-203ENST00000612672 MARCH10Q8NA82 808 aaPredicted RBP33.93■■■■□ 3.02
MMP28-203ENST00000612672 WDR17Q8IZU2 1322 aa33.92■■■■□ 3.02
MMP28-203ENST00000612672 NFAT5O94916 1531 aa33.91■■■■□ 3.02
MMP28-203ENST00000612672 PLSCR1O15162 318 aa33.91■■■■□ 3.02
MMP28-203ENST00000612672 YY1P25490 414 aa33.91■■■■□ 3.02
MMP28-203ENST00000612672 MYOM1P52179 1685 aa33.9■■■■□ 3.02
MMP28-203ENST00000612672 PROM2Q8N271 834 aa33.9■■■■□ 3.02
MMP28-203ENST00000612672 PPP1R1BQ9UD71 204 aaPredicted RBP33.89■■■■□ 3.02
MMP28-203ENST00000612672 NINLQ9Y2I6 1382 aa33.88■■■■□ 3.01
MMP28-203ENST00000612672 C11orf95C9JLR9 678 aaPredicted RBP33.88■■■■□ 3.01
MMP28-203ENST00000612672 BCL11BQ9C0K0 894 aaPredicted RBP33.88■■■■□ 3.01
MMP28-203ENST00000612672 TTC21BQ7Z4L5 1316 aa33.87■■■■□ 3.01
MMP28-203ENST00000612672 ARHGEF25Q86VW2 580 aa33.87■■■■□ 3.01
MMP28-203ENST00000612672 BCL9O00512 1426 aa33.87■■■■□ 3.01
MMP28-203ENST00000612672 L3MBTL2Q969R5 705 aa33.86■■■■□ 3.01
MMP28-203ENST00000612672 MON2Q7Z3U7 1717 aa33.84■■■■□ 3.01
MMP28-203ENST00000612672 SOX12O15370 315 aa33.84■■■■□ 3.01
MMP28-203ENST00000612672 EVC2Q86UK5 1308 aa33.82■■■■□ 3.01
MMP28-203ENST00000612672 CARD10Q9BWT7 1032 aa33.79■■■■□ 3
MMP28-203ENST00000612672 NHSQ6T4R5 1651 aa33.79■■■■□ 3
MMP28-203ENST00000612672 USP54Q70EL1 1684 aa33.78■■■■□ 3
MMP28-203ENST00000612672 ZBTB7AO95365 584 aa33.78■■■■□ 3
MMP28-203ENST00000612672 PTGER2P43116 358 aa33.76■■■□□ 2.99
MMP28-203ENST00000612672 TNS2Q63HR2 1409 aa33.76■■■□□ 2.99
MMP28-203ENST00000612672 ABCC6O95255 1503 aa33.75■■■□□ 2.99
MMP28-203ENST00000612672 SIN3AQ96ST3 1273 aa33.75■■■□□ 2.99
MMP28-203ENST00000612672 CDCA7Q9BWT1 371 aaPredicted RBP33.75■■■□□ 2.99
MMP28-203ENST00000612672 LTN1O94822 1766 aa33.75■■■□□ 2.99
MMP28-203ENST00000612672 PAPPAQ13219 1627 aa33.73■■■□□ 2.99
MMP28-203ENST00000612672 CSB-PGBD3P0DP91 1061 aa33.73■■■□□ 2.99
MMP28-203ENST00000612672 TXNRD1Q16881 649 aa33.73■■■□□ 2.99
MMP28-203ENST00000612672 KCNH5Q8NCM2 988 aa33.73■■■□□ 2.99
MMP28-203ENST00000612672 TTC21AQ8NDW8 1320 aa33.73■■■□□ 2.99
MMP28-203ENST00000612672 ROCK2O75116 1388 aaKnown RBP33.72■■■□□ 2.99
MMP28-203ENST00000612672 ZNF692Q9BU19 519 aaPredicted RBP33.71■■■□□ 2.99
MMP28-203ENST00000612672 KTN1Q86UP2 1357 aaKnown RBP33.71■■■□□ 2.99
MMP28-203ENST00000612672 CD163L1Q9NR16 1453 aa33.7■■■□□ 2.99
MMP28-203ENST00000612672 ATF5Q9Y2D1 282 aaPredicted RBP33.69■■■□□ 2.98
MMP28-203ENST00000612672 CCDC7Q96M83 1385 aa33.69■■■□□ 2.98
MMP28-203ENST00000612672 BTAF1O14981 1849 aa33.68■■■□□ 2.98
MMP28-203ENST00000612672 EXOC5O00471 708 aa33.66■■■□□ 2.98
MMP28-203ENST00000612672 SLC15A2Q16348 729 aa33.66■■■□□ 2.98
MMP28-203ENST00000612672 STK32BQ9NY57 414 aa33.64■■■□□ 2.98
MMP28-203ENST00000612672 USP31Q70CQ4 1352 aa33.63■■■□□ 2.97
MMP28-203ENST00000612672 ACSBG1Q96GR2 724 aa33.63■■■□□ 2.97
MMP28-203ENST00000612672 ERBB3P21860 1342 aa33.62■■■□□ 2.97
MMP28-203ENST00000612672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.62■■■□□ 2.97
MMP28-203ENST00000612672 SGIP1Q9BQI5 828 aa33.62■■■□□ 2.97
MMP28-203ENST00000612672 SBNO2Q9Y2G9 1366 aa33.61■■■□□ 2.97
MMP28-203ENST00000612672 NME9Q86XW9 330 aa33.61■■■□□ 2.97
MMP28-203ENST00000612672 DCAF8L1A6NGE4 600 aa33.59■■■□□ 2.97
MMP28-203ENST00000612672 FHDC1Q9C0D6 1143 aaPredicted RBP33.59■■■□□ 2.97
MMP28-203ENST00000612672 NEUROD1Q13562 356 aa33.58■■■□□ 2.97
MMP28-203ENST00000612672 GOLGB1Q14789 3259 aaKnown RBP33.58■■■□□ 2.97
MMP28-203ENST00000612672 KAT6BQ8WYB5 2073 aa33.56■■■□□ 2.96
MMP28-203ENST00000612672 SYT17Q9BSW7 474 aa33.56■■■□□ 2.96
MMP28-203ENST00000612672 MTFR1LQ9H019 292 aa33.54■■■□□ 2.96
MMP28-203ENST00000612672 NLRP2Q9NX02 1062 aa33.54■■■□□ 2.96
MMP28-203ENST00000612672 CHD4Q14839 1912 aa33.53■■■□□ 2.96
MMP28-203ENST00000612672 ZNF827Q17R98 1081 aa33.53■■■□□ 2.96
MMP28-203ENST00000612672 TUBGCP6Q96RT7 1819 aa33.53■■■□□ 2.96
MMP28-203ENST00000612672 IL2RBP14784 551 aa33.5■■■□□ 2.95
MMP28-203ENST00000612672 ANKRD24Q8TF21 1146 aa33.5■■■□□ 2.95
MMP28-203ENST00000612672 LRRC4BQ9NT99 713 aa33.5■■■□□ 2.95
MMP28-203ENST00000612672 ZNF784Q8NCA9 323 aaPredicted RBP33.49■■■□□ 2.95
MMP28-203ENST00000612672 QSER1Q2KHR3 1735 aa33.48■■■□□ 2.95
MMP28-203ENST00000612672 SLC12A5Q9H2X9 1139 aa33.47■■■□□ 2.95
MMP28-203ENST00000612672 COL24A1Q17RW2 1714 aa33.47■■■□□ 2.95
MMP28-203ENST00000612672 SHANK3Q9BYB0 1731 aa33.47■■■□□ 2.95
MMP28-203ENST00000612672 A0A1W2PP64 1363 aa33.47■■■□□ 2.95
MMP28-203ENST00000612672 EDC4Q6P2E9 1401 aaKnown RBP33.46■■■□□ 2.95
MMP28-203ENST00000612672 RGPD2P0DJD1 1756 aa33.46■■■□□ 2.95
MMP28-203ENST00000612672 FAM208AQ9UK61 1670 aaKnown RBP33.45■■■□□ 2.95
MMP28-203ENST00000612672 TMC1Q8TDI8 760 aa33.44■■■□□ 2.94
MMP28-203ENST00000612672 DOT1LQ8TEK3 1739 aa33.44■■■□□ 2.94
MMP28-203ENST00000612672 ARXQ96QS3 562 aa33.41■■■□□ 2.94
MMP28-203ENST00000612672 MAP3K5Q99683 1374 aa33.4■■■□□ 2.94
MMP28-203ENST00000612672 CARD11Q9BXL7 1154 aa33.4■■■□□ 2.94
MMP28-203ENST00000612672 LY75O60449 1722 aa33.39■■■□□ 2.94
MMP28-203ENST00000612672 AKT1S1Q96B36 256 aa33.38■■■□□ 2.93
MMP28-203ENST00000612672 HDGFL2Q7Z4V5 671 aaPredicted RBP33.37■■■□□ 2.93
MMP28-203ENST00000612672 KCNQ4P56696 695 aa33.34■■■□□ 2.93
MMP28-203ENST00000612672 IP6K1Q92551 441 aa33.34■■■□□ 2.93
MMP28-203ENST00000612672 LTV1Q96GA3 475 aaPredicted RBP33.34■■■□□ 2.93
MMP28-203ENST00000612672 NSD2O96028 1365 aa33.34■■■□□ 2.93
MMP28-203ENST00000612672 PNPLA7Q6ZV29 1317 aa33.32■■■□□ 2.93
MMP28-203ENST00000612672 FBLN1P23142 703 aa33.32■■■□□ 2.92
MMP28-203ENST00000612672 DDX54Q8TDD1 881 aaKnown RBP33.32■■■□□ 2.92
MMP28-203ENST00000612672 MEGF6O75095 1541 aa33.3■■■□□ 2.92
MMP28-203ENST00000612672 TERF2IPQ9NYB0 399 aa33.28■■■□□ 2.92
MMP28-203ENST00000612672 MAP3K19Q56UN5 1328 aa33.28■■■□□ 2.92
MMP28-203ENST00000612672 ANKRD36BQ8N2N9 1353 aa33.25■■■□□ 2.91
MMP28-203ENST00000612672 SLC27A3Q5K4L6 730 aa33.25■■■□□ 2.91
MMP28-203ENST00000612672 HOXC9P31274 260 aa33.24■■■□□ 2.91
MMP28-203ENST00000612672 PRIM1P49642 420 aaKnown RBP33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms