RNA–Protein interactions for RNA: ENST00000612603.1

LINC00272-202, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best)

Gene LINC00272, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-202ENST00000612603 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
LINC00272-202ENST00000612603 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
LINC00272-202ENST00000612603 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
LINC00272-202ENST00000612603 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
LINC00272-202ENST00000612603 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
LINC00272-202ENST00000612603 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
LINC00272-202ENST00000612603 COL18A1P39060 1754 aa16.33■□□□□ 0.21
LINC00272-202ENST00000612603 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
LINC00272-202ENST00000612603 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
LINC00272-202ENST00000612603 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
LINC00272-202ENST00000612603 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
LINC00272-202ENST00000612603 AMPHP49418 695 aa16.32■□□□□ 0.2
LINC00272-202ENST00000612603 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
LINC00272-202ENST00000612603 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
LINC00272-202ENST00000612603 LTV1Q96GA3 475 aaPredicted RBP16.32■□□□□ 0.2
LINC00272-202ENST00000612603 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
LINC00272-202ENST00000612603 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
LINC00272-202ENST00000612603 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
LINC00272-202ENST00000612603 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
LINC00272-202ENST00000612603 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
LINC00272-202ENST00000612603 SPATA31A5Q5VU36 1347 aa16.31■□□□□ 0.2
LINC00272-202ENST00000612603 SPATA31A7Q8IWB4 1347 aa16.31■□□□□ 0.2
LINC00272-202ENST00000612603 SOCS7O14512 581 aa16.3■□□□□ 0.2
LINC00272-202ENST00000612603 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
LINC00272-202ENST00000612603 MAP3K19Q56UN5 1328 aa16.29■□□□□ 0.2
LINC00272-202ENST00000612603 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
LINC00272-202ENST00000612603 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
LINC00272-202ENST00000612603 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
LINC00272-202ENST00000612603 CRB1P82279 1406 aa16.28■□□□□ 0.2
LINC00272-202ENST00000612603 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
LINC00272-202ENST00000612603 NLRP2Q9NX02 1062 aa16.27■□□□□ 0.2
LINC00272-202ENST00000612603 WDR17Q8IZU2 1322 aa16.26■□□□□ 0.19
LINC00272-202ENST00000612603 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
LINC00272-202ENST00000612603 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
LINC00272-202ENST00000612603 TCP11L2Q8N4U5 519 aa16.26■□□□□ 0.19
LINC00272-202ENST00000612603 HOXC9P31274 260 aa16.25■□□□□ 0.19
LINC00272-202ENST00000612603 IP6K1Q92551 441 aa16.25■□□□□ 0.19
LINC00272-202ENST00000612603 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
LINC00272-202ENST00000612603 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
LINC00272-202ENST00000612603 ABCC6O95255 1503 aa16.24■□□□□ 0.19
LINC00272-202ENST00000612603 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
LINC00272-202ENST00000612603 ERBB3P21860 1342 aa16.23■□□□□ 0.19
LINC00272-202ENST00000612603 WNK3Q9BYP7 1800 aa16.23■□□□□ 0.19
LINC00272-202ENST00000612603 NSD2O96028 1365 aa16.23■□□□□ 0.19
LINC00272-202ENST00000612603 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
LINC00272-202ENST00000612603 THSD7AQ9UPZ6 1657 aa16.22■□□□□ 0.19
LINC00272-202ENST00000612603 FAM182BQ5T319 152 aa16.22■□□□□ 0.19
LINC00272-202ENST00000612603 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
LINC00272-202ENST00000612603 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
LINC00272-202ENST00000612603 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
LINC00272-202ENST00000612603 RTL1A6NKG5 1358 aa16.21■□□□□ 0.19
LINC00272-202ENST00000612603 FLT4P35916 1363 aa16.21■□□□□ 0.19
LINC00272-202ENST00000612603 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.18
LINC00272-202ENST00000612603 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
LINC00272-202ENST00000612603 CARD10Q9BWT7 1032 aa16.2■□□□□ 0.18
LINC00272-202ENST00000612603 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
LINC00272-202ENST00000612603 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
LINC00272-202ENST00000612603 BARGINQ6ZT62 677 aa16.19■□□□□ 0.18
LINC00272-202ENST00000612603 USHBP1Q8N6Y0 703 aa16.19■□□□□ 0.18
LINC00272-202ENST00000612603 ONECUT3O60422 494 aaPredicted RBP16.18■□□□□ 0.18
LINC00272-202ENST00000612603 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
LINC00272-202ENST00000612603 PARP4Q9UKK3 1724 aaKnown RBP16.18■□□□□ 0.18
LINC00272-202ENST00000612603 EP400Q96L91 3159 aa16.18■□□□□ 0.18
LINC00272-202ENST00000612603 LRRC37A3O60309 1634 aa16.17■□□□□ 0.18
LINC00272-202ENST00000612603 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
LINC00272-202ENST00000612603 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
LINC00272-202ENST00000612603 DDB1Q16531 1140 aa16.16■□□□□ 0.18
LINC00272-202ENST00000612603 UPF1Q92900 1129 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC00272-202ENST00000612603 INSRP06213 1382 aa16.15■□□□□ 0.18
LINC00272-202ENST00000612603 IL2RBP14784 551 aa16.14■□□□□ 0.17
LINC00272-202ENST00000612603 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
LINC00272-202ENST00000612603 NBPF6Q5VWK0 638 aa16.13■□□□□ 0.17
LINC00272-202ENST00000612603 NBPF4Q96M43 638 aa16.13■□□□□ 0.17
LINC00272-202ENST00000612603 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
LINC00272-202ENST00000612603 EXOC5O00471 708 aa16.12■□□□□ 0.17
LINC00272-202ENST00000612603 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
LINC00272-202ENST00000612603 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
LINC00272-202ENST00000612603 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
LINC00272-202ENST00000612603 MTHFSP49914 203 aa16.1■□□□□ 0.17
LINC00272-202ENST00000612603 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
LINC00272-202ENST00000612603 RAPGEF4Q8WZA2 1011 aa16.1■□□□□ 0.17
LINC00272-202ENST00000612603 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
LINC00272-202ENST00000612603 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
LINC00272-202ENST00000612603 TNS2Q63HR2 1409 aa16.09■□□□□ 0.17
LINC00272-202ENST00000612603 MEGF6O75095 1541 aa16.09■□□□□ 0.17
LINC00272-202ENST00000612603 TRIM37O94972 964 aa16.08■□□□□ 0.16
LINC00272-202ENST00000612603 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
LINC00272-202ENST00000612603 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.16
LINC00272-202ENST00000612603 OVOS2A0A0G2JMS6 1433 aa16.08■□□□□ 0.16
LINC00272-202ENST00000612603 RGPD1P0DJD0 1748 aa16.08■□□□□ 0.16
LINC00272-202ENST00000612603 MARCH10Q8NA82 808 aaPredicted RBP16.07■□□□□ 0.16
LINC00272-202ENST00000612603 EYA1Q99502 592 aa16.07■□□□□ 0.16
LINC00272-202ENST00000612603 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
LINC00272-202ENST00000612603 DEFB132Q7Z7B7 95 aa16.05■□□□□ 0.16
LINC00272-202ENST00000612603 SBF2Q86WG5 1849 aa16.05■□□□□ 0.16
LINC00272-202ENST00000612603 ZCRB1Q8TBF4 217 aaKnown RBP16.04■□□□□ 0.16
LINC00272-202ENST00000612603 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
LINC00272-202ENST00000612603 TNS1Q9HBL0 1735 aaKnown RBP16.04■□□□□ 0.16
LINC00272-202ENST00000612603 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
LINC00272-202ENST00000612603 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms