RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 FAM98CQ17RN3 349 aaKnown RBP25.07■■□□□ 1.6
SEMA3B-211ENST00000612509 LARP1Q6PKG0 1096 aaKnown RBP25.07■■□□□ 1.6
SEMA3B-211ENST00000612509 SEPT12Q8IYM1 358 aa25.07■■□□□ 1.6
SEMA3B-211ENST00000612509 COG3Q96JB2 828 aa25.06■■□□□ 1.6
SEMA3B-211ENST00000612509 CRB1P82279 1406 aa25.05■■□□□ 1.6
SEMA3B-211ENST00000612509 A0A0G2JS52 829 aa25.04■■□□□ 1.6
SEMA3B-211ENST00000612509 C11orf95C9JLR9 678 aaPredicted RBP25.04■■□□□ 1.6
SEMA3B-211ENST00000612509 MYT1Q01538 1121 aa25.04■■□□□ 1.6
SEMA3B-211ENST00000612509 CARD14Q9BXL6 1004 aa25.04■■□□□ 1.6
SEMA3B-211ENST00000612509 AXIN2Q9Y2T1 843 aa25.04■■□□□ 1.6
SEMA3B-211ENST00000612509 WNK3Q9BYP7 1800 aa25.04■■□□□ 1.6
SEMA3B-211ENST00000612509 FYB1O15117 783 aa25.03■■□□□ 1.6
SEMA3B-211ENST00000612509 UPF1Q92900 1129 aaKnown RBP eCLIP25.03■■□□□ 1.6
SEMA3B-211ENST00000612509 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
SEMA3B-211ENST00000612509 USP35Q9P2H5 1018 aa25.02■■□□□ 1.6
SEMA3B-211ENST00000612509 WDR17Q8IZU2 1322 aa25.01■■□□□ 1.59
SEMA3B-211ENST00000612509 ANKRD26Q9UPS8 1709 aa25■■□□□ 1.59
SEMA3B-211ENST00000612509 KIF7Q2M1P5 1343 aa25■■□□□ 1.59
SEMA3B-211ENST00000612509 TCP11L2Q8N4U5 519 aa24.99■■□□□ 1.59
SEMA3B-211ENST00000612509 PARP4Q9UKK3 1724 aaKnown RBP24.99■■□□□ 1.59
SEMA3B-211ENST00000612509 BARGINQ6ZT62 677 aa24.98■■□□□ 1.59
SEMA3B-211ENST00000612509 BLMP54132 1417 aaPredicted RBP24.97■■□□□ 1.59
SEMA3B-211ENST00000612509 TOM1L2Q6ZVM7 507 aa24.97■■□□□ 1.59
SEMA3B-211ENST00000612509 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
SEMA3B-211ENST00000612509 THRAP3Q9Y2W1 955 aaKnown RBP24.97■■□□□ 1.59
SEMA3B-211ENST00000612509 ERBB3P21860 1342 aa24.96■■□□□ 1.59
SEMA3B-211ENST00000612509 CGNL1Q0VF96 1302 aa24.96■■□□□ 1.59
SEMA3B-211ENST00000612509 FAM208AQ9UK61 1670 aaKnown RBP24.96■■□□□ 1.59
SEMA3B-211ENST00000612509 LRRC37A3O60309 1634 aa24.96■■□□□ 1.59
SEMA3B-211ENST00000612509 RTL1A6NKG5 1358 aa24.95■■□□□ 1.59
SEMA3B-211ENST00000612509 MAP3K19Q56UN5 1328 aa24.95■■□□□ 1.58
SEMA3B-211ENST00000612509 CSB-PGBD3P0DP91 1061 aa24.95■■□□□ 1.58
SEMA3B-211ENST00000612509 PANK3Q9H999 370 aa24.94■■□□□ 1.58
SEMA3B-211ENST00000612509 EP400Q96L91 3159 aa24.94■■□□□ 1.58
SEMA3B-211ENST00000612509 PEAK1Q9H792 1746 aa24.92■■□□□ 1.58
SEMA3B-211ENST00000612509 FBLN1P23142 703 aa24.92■■□□□ 1.58
SEMA3B-211ENST00000612509 IP6K1Q92551 441 aa24.91■■□□□ 1.58
SEMA3B-211ENST00000612509 CCDC7Q96M83 1385 aa24.91■■□□□ 1.58
SEMA3B-211ENST00000612509 RRS1Q15050 365 aaKnown RBP24.9■■□□□ 1.58
SEMA3B-211ENST00000612509 ANKRD24Q8TF21 1146 aa24.9■■□□□ 1.58
SEMA3B-211ENST00000612509 CARD10Q9BWT7 1032 aa24.9■■□□□ 1.58
SEMA3B-211ENST00000612509 DISP2A7MBM2 1401 aa24.89■■□□□ 1.58
SEMA3B-211ENST00000612509 HOXC9P31274 260 aa24.89■■□□□ 1.58
SEMA3B-211ENST00000612509 AMPHP49418 695 aa24.88■■□□□ 1.57
SEMA3B-211ENST00000612509 NSD2O96028 1365 aa24.88■■□□□ 1.57
SEMA3B-211ENST00000612509 KIF24Q5T7B8 1368 aa24.86■■□□□ 1.57
SEMA3B-211ENST00000612509 WASHC2AQ641Q2 1341 aa24.86■■□□□ 1.57
SEMA3B-211ENST00000612509 FLT4P35916 1363 aa24.85■■□□□ 1.57
SEMA3B-211ENST00000612509 RGPD1P0DJD0 1748 aa24.85■■□□□ 1.57
SEMA3B-211ENST00000612509 RGPD2P0DJD1 1756 aa24.85■■□□□ 1.57
SEMA3B-211ENST00000612509 NLRP2Q9NX02 1062 aa24.84■■□□□ 1.57
SEMA3B-211ENST00000612509 MAP2P11137 1827 aaKnown RBP24.84■■□□□ 1.57
SEMA3B-211ENST00000612509 FAM182BQ5T319 152 aa24.83■■□□□ 1.57
SEMA3B-211ENST00000612509 LTV1Q96GA3 475 aaPredicted RBP24.83■■□□□ 1.57
SEMA3B-211ENST00000612509 CDCA7Q9BWT1 371 aaPredicted RBP24.83■■□□□ 1.57
SEMA3B-211ENST00000612509 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
SEMA3B-211ENST00000612509 PDE3BQ13370 1112 aa24.82■■□□□ 1.56
SEMA3B-211ENST00000612509 TNS2Q63HR2 1409 aa24.82■■□□□ 1.56
SEMA3B-211ENST00000612509 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
SEMA3B-211ENST00000612509 CCDC125Q86Z20 511 aa24.82■■□□□ 1.56
SEMA3B-211ENST00000612509 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
SEMA3B-211ENST00000612509 EMILIN1Q9Y6C2 1016 aa24.81■■□□□ 1.56
SEMA3B-211ENST00000612509 INSRP06213 1382 aa24.8■■□□□ 1.56
SEMA3B-211ENST00000612509 DDB1Q16531 1140 aa24.8■■□□□ 1.56
SEMA3B-211ENST00000612509 OVOS2A0A0G2JMS6 1433 aa24.78■■□□□ 1.56
SEMA3B-211ENST00000612509 FAM196AQ6ZSG2 479 aa24.77■■□□□ 1.56
SEMA3B-211ENST00000612509 HSP90AB2PQ58FF8 381 aa24.76■■□□□ 1.55
SEMA3B-211ENST00000612509 AMER1Q5JTC6 1135 aaPredicted RBP24.76■■□□□ 1.55
SEMA3B-211ENST00000612509 IL2RBP14784 551 aa24.75■■□□□ 1.55
SEMA3B-211ENST00000612509 TNNT2P45379 298 aaPredicted RBP24.75■■□□□ 1.55
SEMA3B-211ENST00000612509 SF3B2Q13435 895 aaKnown RBP24.75■■□□□ 1.55
SEMA3B-211ENST00000612509 SBF2Q86WG5 1849 aa24.73■■□□□ 1.55
SEMA3B-211ENST00000612509 PPM1GO15355 546 aaPredicted RBP24.73■■□□□ 1.55
SEMA3B-211ENST00000612509 POLKQ9UBT6 870 aa24.73■■□□□ 1.55
SEMA3B-211ENST00000612509 MEGF6O75095 1541 aa24.72■■□□□ 1.55
SEMA3B-211ENST00000612509 PER1O15534 1290 aaPredicted RBP24.72■■□□□ 1.55
SEMA3B-211ENST00000612509 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
SEMA3B-211ENST00000612509 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
SEMA3B-211ENST00000612509 BCL9O00512 1426 aa24.7■■□□□ 1.55
SEMA3B-211ENST00000612509 EXOC5O00471 708 aa24.7■■□□□ 1.54
SEMA3B-211ENST00000612509 NBPF6Q5VWK0 638 aa24.7■■□□□ 1.54
SEMA3B-211ENST00000612509 DEFB132Q7Z7B7 95 aa24.7■■□□□ 1.54
SEMA3B-211ENST00000612509 MARCH10Q8NA82 808 aaPredicted RBP24.7■■□□□ 1.54
SEMA3B-211ENST00000612509 NBPF4Q96M43 638 aa24.7■■□□□ 1.54
SEMA3B-211ENST00000612509 TRIM37O94972 964 aa24.69■■□□□ 1.54
SEMA3B-211ENST00000612509 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
SEMA3B-211ENST00000612509 USHBP1Q8N6Y0 703 aa24.68■■□□□ 1.54
SEMA3B-211ENST00000612509 NPC1L1Q9UHC9 1359 aa24.67■■□□□ 1.54
SEMA3B-211ENST00000612509 BAG6P46379 1132 aa24.67■■□□□ 1.54
SEMA3B-211ENST00000612509 CC2D1BQ5T0F9 858 aaKnown RBP24.65■■□□□ 1.54
SEMA3B-211ENST00000612509 NHSQ6T4R5 1651 aa24.65■■□□□ 1.54
SEMA3B-211ENST00000612509 PKD1L3Q7Z443 1732 aa24.62■■□□□ 1.53
SEMA3B-211ENST00000612509 RGPD3A6NKT7 1758 aaPredicted RBP24.62■■□□□ 1.53
SEMA3B-211ENST00000612509 RGPD4Q7Z3J3 1758 aa24.62■■□□□ 1.53
SEMA3B-211ENST00000612509 EIF4A2Q14240 407 aaKnown RBP24.61■■□□□ 1.53
SEMA3B-211ENST00000612509 RREB1Q92766 1687 aa24.61■■□□□ 1.53
SEMA3B-211ENST00000612509 RAPGEF4Q8WZA2 1011 aa24.6■■□□□ 1.53
SEMA3B-211ENST00000612509 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
SEMA3B-211ENST00000612509 EN1Q05925 392 aaPredicted RBP24.59■■□□□ 1.53
SEMA3B-211ENST00000612509 DOT1LQ8TEK3 1739 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms