RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 SGIP1Q9BQI5 828 aa15.26■□□□□ 0.03
SSX3-204ENST00000612497 ACEP12821 1306 aa15.25■□□□□ 0.03
SSX3-204ENST00000612497 AKAP12Q02952 1782 aa15.24■□□□□ 0.03
SSX3-204ENST00000612497 GCP02774 474 aa15.24■□□□□ 0.03
SSX3-204ENST00000612497 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
SSX3-204ENST00000612497 USP19O94966 1318 aa15.23■□□□□ 0.03
SSX3-204ENST00000612497 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
SSX3-204ENST00000612497 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
SSX3-204ENST00000612497 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
SSX3-204ENST00000612497 POLR3AO14802 1390 aaPredicted RBP15.23■□□□□ 0.03
SSX3-204ENST00000612497 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
SSX3-204ENST00000612497 CDK19Q9BWU1 502 aa15.22■□□□□ 0.03
SSX3-204ENST00000612497 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
SSX3-204ENST00000612497 GOLGB1Q14789 3259 aaKnown RBP15.21■□□□□ 0.03
SSX3-204ENST00000612497 KDM2AQ9Y2K7 1162 aa15.21■□□□□ 0.03
SSX3-204ENST00000612497 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.03
SSX3-204ENST00000612497 WNK3Q9BYP7 1800 aa15.2■□□□□ 0.02
SSX3-204ENST00000612497 BCL9O00512 1426 aa15.19■□□□□ 0.02
SSX3-204ENST00000612497 PLEKHG3A1L390 1219 aa15.19■□□□□ 0.02
SSX3-204ENST00000612497 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
SSX3-204ENST00000612497 TOPAZ1Q8N9V7 1692 aa15.19■□□□□ 0.02
SSX3-204ENST00000612497 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
SSX3-204ENST00000612497 SHANK3Q9BYB0 1731 aa15.18■□□□□ 0.02
SSX3-204ENST00000612497 AATKQ6ZMQ8 1374 aa15.18■□□□□ 0.02
SSX3-204ENST00000612497 KAT6BQ8WYB5 2073 aa15.17■□□□□ 0.02
SSX3-204ENST00000612497 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
SSX3-204ENST00000612497 EXOC5O00471 708 aa15.15■□□□□ 0.02
SSX3-204ENST00000612497 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
SSX3-204ENST00000612497 NLRP6P59044 892 aa15.14■□□□□ 0.01
SSX3-204ENST00000612497 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
SSX3-204ENST00000612497 POLD1P28340 1107 aa15.13■□□□□ 0.01
SSX3-204ENST00000612497 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
SSX3-204ENST00000612497 COL18A1P39060 1754 aa15.13■□□□□ 0.01
SSX3-204ENST00000612497 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
SSX3-204ENST00000612497 ZNF827Q17R98 1081 aa15.12■□□□□ 0.01
SSX3-204ENST00000612497 ACSBG1Q96GR2 724 aa15.12■□□□□ 0.01
SSX3-204ENST00000612497 PAPPAQ13219 1627 aa15.11■□□□□ 0.01
SSX3-204ENST00000612497 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
SSX3-204ENST00000612497 CARD10Q9BWT7 1032 aa15.11■□□□□ 0.01
SSX3-204ENST00000612497 NHSQ6T4R5 1651 aa15.11■□□□□ 0.01
SSX3-204ENST00000612497 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
SSX3-204ENST00000612497 GRIN3BO60391 1043 aa15.1■□□□□ 0.01
SSX3-204ENST00000612497 HSPA6P17066 643 aa15.1■□□□□ 0.01
SSX3-204ENST00000612497 SRPK2P78362 688 aaKnown RBP15.1■□□□□ 0.01
SSX3-204ENST00000612497 SLC16A10Q8TF71 515 aa15.1■□□□□ 0.01
SSX3-204ENST00000612497 SLIT3O75094 1523 aa15.09■□□□□ 0.01
SSX3-204ENST00000612497 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
SSX3-204ENST00000612497 ATP10DQ9P241 1426 aa15.09■□□□□ 0.01
SSX3-204ENST00000612497 BTAF1O14981 1849 aa15.08■□□□□ 0.01
SSX3-204ENST00000612497 YBX3P16989 372 aaKnown RBP eCLIP15.08■□□□□ 0
SSX3-204ENST00000612497 GPBP1L1Q9HC44 474 aaPredicted RBP15.08■□□□□ 0
SSX3-204ENST00000612497 STAC3Q96MF2 364 aa15.07■□□□□ 0
SSX3-204ENST00000612497 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
SSX3-204ENST00000612497 USP6P35125 1406 aa15.07■□□□□ 0
SSX3-204ENST00000612497 CPSF1Q10570 1443 aaKnown RBP15.07■□□□□ 0
SSX3-204ENST00000612497 TNS2Q63HR2 1409 aa15.07■□□□□ 0
SSX3-204ENST00000612497 SOX12O15370 315 aa15.06■□□□□ 0
SSX3-204ENST00000612497 CABP2Q9NPB3 220 aa15.06■□□□□ 0
SSX3-204ENST00000612497 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
SSX3-204ENST00000612497 ARHGEF25Q86VW2 580 aa15.05■□□□□ -0
SSX3-204ENST00000612497 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ -0
SSX3-204ENST00000612497 AKT1S1Q96B36 256 aa15.05■□□□□ -0
SSX3-204ENST00000612497 CCDC7Q96M83 1385 aa15.05■□□□□ -0
SSX3-204ENST00000612497 QSER1Q2KHR3 1735 aa15.05■□□□□ -0
SSX3-204ENST00000612497 PNPLA7Q6ZV29 1317 aa15.04■□□□□ -0
SSX3-204ENST00000612497 TFCP2L1Q9NZI6 479 aa15.04■□□□□ -0
SSX3-204ENST00000612497 CABP1Q9NZU7 370 aa15.04■□□□□ -0
SSX3-204ENST00000612497 PIK3C2AO00443 1686 aa15.03■□□□□ -0
SSX3-204ENST00000612497 KCNH5Q8NCM2 988 aa15.03■□□□□ -0
SSX3-204ENST00000612497 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
SSX3-204ENST00000612497 ABCC6O95255 1503 aa15.02□□□□□ -0.01
SSX3-204ENST00000612497 TUBGCP6Q96RT7 1819 aa15.01□□□□□ -0.01
SSX3-204ENST00000612497 SLC27A3Q5K4L6 730 aa15.01□□□□□ -0.01
SSX3-204ENST00000612497 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
SSX3-204ENST00000612497 IL2RBP14784 551 aa14.99□□□□□ -0.01
SSX3-204ENST00000612497 KCNQ4P56696 695 aa14.99□□□□□ -0.01
SSX3-204ENST00000612497 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
SSX3-204ENST00000612497 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
SSX3-204ENST00000612497 ADCY9O60503 1353 aa14.97□□□□□ -0.01
SSX3-204ENST00000612497 TTC21BQ7Z4L5 1316 aa14.95□□□□□ -0.02
SSX3-204ENST00000612497 KIAA1210Q9ULL0 1709 aa14.95□□□□□ -0.02
SSX3-204ENST00000612497 APLP1P51693 650 aa14.95□□□□□ -0.02
SSX3-204ENST00000612497 NBPF1Q3BBV0 1214 aa14.95□□□□□ -0.02
SSX3-204ENST00000612497 NFAT5O94916 1531 aa14.94□□□□□ -0.02
SSX3-204ENST00000612497 MSL1Q68DK7 614 aa14.94□□□□□ -0.02
SSX3-204ENST00000612497 SYTL4Q96C24 671 aaPredicted RBP14.94□□□□□ -0.02
SSX3-204ENST00000612497 CAPN15O75808 1086 aa14.93□□□□□ -0.02
SSX3-204ENST00000612497 COL23A1Q86Y22 540 aaPredicted RBP14.93□□□□□ -0.02
SSX3-204ENST00000612497 DDX54Q8TDD1 881 aaKnown RBP14.93□□□□□ -0.02
SSX3-204ENST00000612497 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
SSX3-204ENST00000612497 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
SSX3-204ENST00000612497 ERBB3P21860 1342 aa14.92□□□□□ -0.02
SSX3-204ENST00000612497 KIF3CO14782 793 aa14.92□□□□□ -0.02
SSX3-204ENST00000612497 RAB3GAP2Q9H2M9 1393 aa14.92□□□□□ -0.02
SSX3-204ENST00000612497 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
SSX3-204ENST00000612497 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
SSX3-204ENST00000612497 LY75O60449 1722 aa14.9□□□□□ -0.02
SSX3-204ENST00000612497 PRIM1P49642 420 aaKnown RBP14.9□□□□□ -0.02
SSX3-204ENST00000612497 DNAJC5GQ8N7S2 189 aa14.9□□□□□ -0.02
SSX3-204ENST00000612497 ANKRD24Q8TF21 1146 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms