RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 ADAMTS2O95450 1211 aa26.02■■□□□ 1.76
SRRM3-205ENST00000612155 FBXO41Q8TF61 875 aa26.02■■□□□ 1.76
SRRM3-205ENST00000612155 AATKQ6ZMQ8 1374 aa26.02■■□□□ 1.76
SRRM3-205ENST00000612155 PEAK1Q9H792 1746 aa26.02■■□□□ 1.76
SRRM3-205ENST00000612155 RNF123Q5XPI4 1314 aa26.02■■□□□ 1.76
SRRM3-205ENST00000612155 KIAA0232Q92628 1395 aa26.02■■□□□ 1.76
SRRM3-205ENST00000612155 LTN1O94822 1766 aa26.01■■□□□ 1.75
SRRM3-205ENST00000612155 AMPHP49418 695 aa26.01■■□□□ 1.75
SRRM3-205ENST00000612155 TSHZ2Q9NRE2 1034 aa26.01■■□□□ 1.75
SRRM3-205ENST00000612155 ADAMTS8Q9UP79 889 aa26.01■■□□□ 1.75
SRRM3-205ENST00000612155 JCADQ9P266 1359 aa26■■□□□ 1.75
SRRM3-205ENST00000612155 HSP90AB2PQ58FF8 381 aa26■■□□□ 1.75
SRRM3-205ENST00000612155 ARHGEF25Q86VW2 580 aa26■■□□□ 1.75
SRRM3-205ENST00000612155 COL22A1Q8NFW1 1626 aaPredicted RBP25.99■■□□□ 1.75
SRRM3-205ENST00000612155 ERICH6BQ5W0A0 696 aa25.98■■□□□ 1.75
SRRM3-205ENST00000612155 AXIN2Q9Y2T1 843 aa25.98■■□□□ 1.75
SRRM3-205ENST00000612155 SHPRHQ149N8 1683 aa25.97■■□□□ 1.75
SRRM3-205ENST00000612155 LTV1Q96GA3 475 aaPredicted RBP25.97■■□□□ 1.75
SRRM3-205ENST00000612155 PRDM11Q9NQV5 511 aa25.96■■□□□ 1.75
SRRM3-205ENST00000612155 HOXC9P31274 260 aa25.96■■□□□ 1.75
SRRM3-205ENST00000612155 FAM83GA6ND36 823 aa25.95■■□□□ 1.74
SRRM3-205ENST00000612155 CDCA7LQ96GN5 454 aa25.93■■□□□ 1.74
SRRM3-205ENST00000612155 RGPD5Q99666 1765 aa25.92■■□□□ 1.74
SRRM3-205ENST00000612155 FLT4P35916 1363 aa25.92■■□□□ 1.74
SRRM3-205ENST00000612155 PPP4R2Q9NY27 417 aa25.92■■□□□ 1.74
SRRM3-205ENST00000612155 IP6K1Q92551 441 aa25.91■■□□□ 1.74
SRRM3-205ENST00000612155 LRP6O75581 1613 aa25.91■■□□□ 1.74
SRRM3-205ENST00000612155 CFAP53Q96M91 514 aa25.9■■□□□ 1.74
SRRM3-205ENST00000612155 CDK12Q9NYV4 1490 aaPredicted RBP25.9■■□□□ 1.74
SRRM3-205ENST00000612155 COL3A1P02461 1466 aaPredicted RBP25.89■■□□□ 1.74
SRRM3-205ENST00000612155 CPDO75976 1380 aa25.89■■□□□ 1.74
SRRM3-205ENST00000612155 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.73
SRRM3-205ENST00000612155 PDE3BQ13370 1112 aa25.88■■□□□ 1.73
SRRM3-205ENST00000612155 COL18A1P39060 1754 aa25.87■■□□□ 1.73
SRRM3-205ENST00000612155 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
SRRM3-205ENST00000612155 DIAPH1O60610 1272 aaKnown RBP25.87■■□□□ 1.73
SRRM3-205ENST00000612155 WDR43Q15061 677 aaKnown RBP eCLIP25.87■■□□□ 1.73
SRRM3-205ENST00000612155 C8orf37Q96NL8 207 aa25.86■■□□□ 1.73
SRRM3-205ENST00000612155 SPATA31A6Q5VVP1 1343 aa25.86■■□□□ 1.73
SRRM3-205ENST00000612155 CAMTA1Q9Y6Y1 1673 aa25.85■■□□□ 1.73
SRRM3-205ENST00000612155 BTG4Q9NY30 223 aa25.85■■□□□ 1.73
SRRM3-205ENST00000612155 IL13P35225 146 aa25.85■■□□□ 1.73
SRRM3-205ENST00000612155 ANKRD24Q8TF21 1146 aa25.85■■□□□ 1.73
SRRM3-205ENST00000612155 STRN4Q9NRL3 753 aa25.85■■□□□ 1.73
SRRM3-205ENST00000612155 RTL1A6NKG5 1358 aa25.84■■□□□ 1.73
SRRM3-205ENST00000612155 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
SRRM3-205ENST00000612155 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
SRRM3-205ENST00000612155 MEX3CQ5U5Q3 659 aaKnown RBP25.82■■□□□ 1.72
SRRM3-205ENST00000612155 HMOX1P09601 288 aa25.81■■□□□ 1.72
SRRM3-205ENST00000612155 LMO7Q8WWI1 1683 aa25.81■■□□□ 1.72
SRRM3-205ENST00000612155 RGPD2P0DJD1 1756 aa25.81■■□□□ 1.72
SRRM3-205ENST00000612155 U2AF1L5P0DN76 240 aaPredicted RBP25.8■■□□□ 1.72
SRRM3-205ENST00000612155 U2AF1Q01081 240 aaKnown RBP eCLIP25.8■■□□□ 1.72
SRRM3-205ENST00000612155 NGLY1Q96IV0 654 aa25.8■■□□□ 1.72
SRRM3-205ENST00000612155 KIF24Q5T7B8 1368 aa25.8■■□□□ 1.72
SRRM3-205ENST00000612155 ERBB3P21860 1342 aa25.8■■□□□ 1.72
SRRM3-205ENST00000612155 CSB-PGBD3P0DP91 1061 aa25.8■■□□□ 1.72
SRRM3-205ENST00000612155 CCDC146Q8IYE0 955 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 RCAN3Q9UKA8 241 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 ZNF521Q96K83 1311 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 NBPF6Q5VWK0 638 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 AEBP1Q8IUX7 1158 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 NBPF4Q96M43 638 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 EYA1Q99502 592 aa25.79■■□□□ 1.72
SRRM3-205ENST00000612155 COL14A1Q05707 1796 aaKnown RBP25.78■■□□□ 1.72
SRRM3-205ENST00000612155 EVA1CP58658 441 aa25.77■■□□□ 1.72
SRRM3-205ENST00000612155 LARP1Q6PKG0 1096 aaKnown RBP25.77■■□□□ 1.72
SRRM3-205ENST00000612155 ILDR1Q86SU0 546 aaPredicted RBP25.77■■□□□ 1.72
SRRM3-205ENST00000612155 PLCH1Q4KWH8 1693 aa25.77■■□□□ 1.72
SRRM3-205ENST00000612155 COL5A2P05997 1499 aaPredicted RBP25.77■■□□□ 1.72
SRRM3-205ENST00000612155 NLRP2Q9NX02 1062 aa25.76■■□□□ 1.71
SRRM3-205ENST00000612155 USP35Q9P2H5 1018 aa25.76■■□□□ 1.71
SRRM3-205ENST00000612155 RRP1P56182 461 aaKnown RBP25.75■■□□□ 1.71
SRRM3-205ENST00000612155 SULT6B1Q6IMI4 303 aa25.75■■□□□ 1.71
SRRM3-205ENST00000612155 TOM1L2Q6ZVM7 507 aa25.73■■□□□ 1.71
SRRM3-205ENST00000612155 WDR17Q8IZU2 1322 aa25.71■■□□□ 1.71
SRRM3-205ENST00000612155 SLIT2O94813 1529 aa25.71■■□□□ 1.71
SRRM3-205ENST00000612155 APAF1O14727 1248 aa25.71■■□□□ 1.71
SRRM3-205ENST00000612155 RGPD1P0DJD0 1748 aa25.7■■□□□ 1.71
SRRM3-205ENST00000612155 ABCC6O95255 1503 aa25.7■■□□□ 1.7
SRRM3-205ENST00000612155 IGSF1Q8N6C5 1336 aa25.7■■□□□ 1.7
SRRM3-205ENST00000612155 AFF2P51816 1311 aa25.69■■□□□ 1.7
SRRM3-205ENST00000612155 DUSP27Q5VZP5 1158 aa25.68■■□□□ 1.7
SRRM3-205ENST00000612155 USP21Q9UK80 565 aa25.68■■□□□ 1.7
SRRM3-205ENST00000612155 BCL9LQ86UU0 1499 aa25.68■■□□□ 1.7
SRRM3-205ENST00000612155 PRKAR2BP31323 418 aa25.68■■□□□ 1.7
SRRM3-205ENST00000612155 CCDC9Q9Y3X0 531 aaKnown RBP25.68■■□□□ 1.7
SRRM3-205ENST00000612155 RSPH6AQ9H0K4 717 aa25.67■■□□□ 1.7
SRRM3-205ENST00000612155 NRAPQ86VF7 1730 aa25.67■■□□□ 1.7
SRRM3-205ENST00000612155 FNBP4Q8N3X1 1017 aaPredicted RBP25.66■■□□□ 1.7
SRRM3-205ENST00000612155 UNC5CLQ8IV45 518 aa25.66■■□□□ 1.7
SRRM3-205ENST00000612155 SPINK5Q9NQ38 1064 aaPredicted RBP25.65■■□□□ 1.7
SRRM3-205ENST00000612155 PHACTR3Q96KR7 559 aa25.65■■□□□ 1.7
SRRM3-205ENST00000612155 GOLGA2Q08379 1002 aa25.64■■□□□ 1.7
SRRM3-205ENST00000612155 SLFN5Q08AF3 891 aa25.63■■□□□ 1.69
SRRM3-205ENST00000612155 TRMT2AQ8IZ69 625 aaKnown RBP25.63■■□□□ 1.69
SRRM3-205ENST00000612155 NWD2Q9ULI1 1742 aa25.63■■□□□ 1.69
SRRM3-205ENST00000612155 EXOC6Q8TAG9 804 aa25.62■■□□□ 1.69
SRRM3-205ENST00000612155 CRB1P82279 1406 aa25.62■■□□□ 1.69
SRRM3-205ENST00000612155 PLEKHF1Q96S99 279 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms