RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 C11orf95C9JLR9 678 aaPredicted RBP20.15■□□□□ 0.82
LINC00116-203ENST00000611969 AATKQ6ZMQ8 1374 aa20.14■□□□□ 0.81
LINC00116-203ENST00000611969 DDB1Q16531 1140 aa20.14■□□□□ 0.81
LINC00116-203ENST00000611969 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
LINC00116-203ENST00000611969 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.81
LINC00116-203ENST00000611969 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
LINC00116-203ENST00000611969 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
LINC00116-203ENST00000611969 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
LINC00116-203ENST00000611969 MARCH10Q8NA82 808 aaPredicted RBP20.12■□□□□ 0.81
LINC00116-203ENST00000611969 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
LINC00116-203ENST00000611969 BCL9O00512 1426 aa20.11■□□□□ 0.81
LINC00116-203ENST00000611969 USP6P35125 1406 aa20.11■□□□□ 0.81
LINC00116-203ENST00000611969 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
LINC00116-203ENST00000611969 TOM1L2Q6ZVM7 507 aa20.1■□□□□ 0.81
LINC00116-203ENST00000611969 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
LINC00116-203ENST00000611969 SYT17Q9BSW7 474 aa20.09■□□□□ 0.81
LINC00116-203ENST00000611969 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
LINC00116-203ENST00000611969 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
LINC00116-203ENST00000611969 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.8
LINC00116-203ENST00000611969 WDR17Q8IZU2 1322 aa20.07■□□□□ 0.8
LINC00116-203ENST00000611969 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
LINC00116-203ENST00000611969 SGIP1Q9BQI5 828 aa20.07■□□□□ 0.8
LINC00116-203ENST00000611969 CABP2Q9NPB3 220 aa20.07■□□□□ 0.8
LINC00116-203ENST00000611969 STK32BQ9NY57 414 aa20.07■□□□□ 0.8
LINC00116-203ENST00000611969 AXIN2Q9Y2T1 843 aa20.07■□□□□ 0.8
LINC00116-203ENST00000611969 BTAF1O14981 1849 aa20.06■□□□□ 0.8
LINC00116-203ENST00000611969 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
LINC00116-203ENST00000611969 NLRP6P59044 892 aa20.05■□□□□ 0.8
LINC00116-203ENST00000611969 SLC15A2Q16348 729 aa20.05■□□□□ 0.8
LINC00116-203ENST00000611969 TNS2Q63HR2 1409 aa20.04■□□□□ 0.8
LINC00116-203ENST00000611969 NFAT5O94916 1531 aa20.04■□□□□ 0.8
LINC00116-203ENST00000611969 C1QTNF8P60827 252 aa20.04■□□□□ 0.8
LINC00116-203ENST00000611969 ABCC6O95255 1503 aa20.03■□□□□ 0.8
LINC00116-203ENST00000611969 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
LINC00116-203ENST00000611969 MTFR1LQ9H019 292 aa20.03■□□□□ 0.8
LINC00116-203ENST00000611969 TUBGCP6Q96RT7 1819 aa20.02■□□□□ 0.8
LINC00116-203ENST00000611969 COL24A1Q17RW2 1714 aa20.01■□□□□ 0.79
LINC00116-203ENST00000611969 QSER1Q2KHR3 1735 aa20.01■□□□□ 0.79
LINC00116-203ENST00000611969 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
LINC00116-203ENST00000611969 SHANK3Q9BYB0 1731 aa20■□□□□ 0.79
LINC00116-203ENST00000611969 CDCA7Q9BWT1 371 aaPredicted RBP20■□□□□ 0.79
LINC00116-203ENST00000611969 CABP1Q9NZU7 370 aa20■□□□□ 0.79
LINC00116-203ENST00000611969 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
LINC00116-203ENST00000611969 LTN1O94822 1766 aa19.98■□□□□ 0.79
LINC00116-203ENST00000611969 SOX12O15370 315 aa19.98■□□□□ 0.79
LINC00116-203ENST00000611969 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
LINC00116-203ENST00000611969 CARD10Q9BWT7 1032 aa19.98■□□□□ 0.79
LINC00116-203ENST00000611969 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
LINC00116-203ENST00000611969 ARXQ96QS3 562 aa19.97■□□□□ 0.79
LINC00116-203ENST00000611969 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
LINC00116-203ENST00000611969 CSB-PGBD3P0DP91 1061 aa19.96■□□□□ 0.79
LINC00116-203ENST00000611969 ZNF827Q17R98 1081 aa19.96■□□□□ 0.79
LINC00116-203ENST00000611969 CEP350Q5VT06 3117 aa19.96■□□□□ 0.79
LINC00116-203ENST00000611969 USP54Q70EL1 1684 aa19.95■□□□□ 0.78
LINC00116-203ENST00000611969 ACSBG1Q96GR2 724 aa19.95■□□□□ 0.78
LINC00116-203ENST00000611969 CCDC7Q96M83 1385 aa19.95■□□□□ 0.78
LINC00116-203ENST00000611969 KAT6BQ8WYB5 2073 aa19.93■□□□□ 0.78
LINC00116-203ENST00000611969 EXOC5O00471 708 aa19.93■□□□□ 0.78
LINC00116-203ENST00000611969 TTC21BQ7Z4L5 1316 aa19.92■□□□□ 0.78
LINC00116-203ENST00000611969 IFFO2Q5TF58 517 aa19.91■□□□□ 0.78
LINC00116-203ENST00000611969 GPR162Q16538 588 aa19.9■□□□□ 0.78
LINC00116-203ENST00000611969 KCNH5Q8NCM2 988 aa19.9■□□□□ 0.78
LINC00116-203ENST00000611969 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.77
LINC00116-203ENST00000611969 LRRC4BQ9NT99 713 aa19.89■□□□□ 0.77
LINC00116-203ENST00000611969 DOT1LQ8TEK3 1739 aa19.88■□□□□ 0.77
LINC00116-203ENST00000611969 KLHL34Q8N239 644 aa19.88■□□□□ 0.77
LINC00116-203ENST00000611969 LY75O60449 1722 aa19.87■□□□□ 0.77
LINC00116-203ENST00000611969 ERBB3P21860 1342 aa19.86■□□□□ 0.77
LINC00116-203ENST00000611969 EVC2Q86UK5 1308 aa19.85■□□□□ 0.77
LINC00116-203ENST00000611969 TTC21AQ8NDW8 1320 aa19.85■□□□□ 0.77
LINC00116-203ENST00000611969 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
LINC00116-203ENST00000611969 NLGN2Q8NFZ4 835 aa19.84■□□□□ 0.77
LINC00116-203ENST00000611969 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
LINC00116-203ENST00000611969 PNPLA7Q6ZV29 1317 aa19.83■□□□□ 0.77
LINC00116-203ENST00000611969 FAM208AQ9UK61 1670 aaKnown RBP19.83■□□□□ 0.76
LINC00116-203ENST00000611969 KTN1Q86UP2 1357 aaKnown RBP19.83■□□□□ 0.76
LINC00116-203ENST00000611969 IL2RBP14784 551 aa19.82■□□□□ 0.76
LINC00116-203ENST00000611969 NLRP2Q9NX02 1062 aa19.82■□□□□ 0.76
LINC00116-203ENST00000611969 KCNQ4P56696 695 aa19.8■□□□□ 0.76
LINC00116-203ENST00000611969 ZNF692Q9BU19 519 aaPredicted RBP19.8■□□□□ 0.76
LINC00116-203ENST00000611969 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
LINC00116-203ENST00000611969 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
LINC00116-203ENST00000611969 YBX3P16989 372 aaKnown RBP eCLIP19.79■□□□□ 0.76
LINC00116-203ENST00000611969 POLD1P28340 1107 aa19.79■□□□□ 0.76
LINC00116-203ENST00000611969 USP31Q70CQ4 1352 aa19.79■□□□□ 0.76
LINC00116-203ENST00000611969 SLC16A10Q8TF71 515 aa19.78■□□□□ 0.76
LINC00116-203ENST00000611969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.76
LINC00116-203ENST00000611969 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.76
LINC00116-203ENST00000611969 NSD2O96028 1365 aa19.76■□□□□ 0.75
LINC00116-203ENST00000611969 SBNO2Q9Y2G9 1366 aa19.76■□□□□ 0.75
LINC00116-203ENST00000611969 NME9Q86XW9 330 aa19.76■□□□□ 0.75
LINC00116-203ENST00000611969 ATP10DQ9P241 1426 aa19.76■□□□□ 0.75
LINC00116-203ENST00000611969 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
LINC00116-203ENST00000611969 C5P01031 1676 aa19.75■□□□□ 0.75
LINC00116-203ENST00000611969 TFCP2L1Q9NZI6 479 aa19.74■□□□□ 0.75
LINC00116-203ENST00000611969 TAF1LQ8IZX4 1826 aa19.72■□□□□ 0.75
LINC00116-203ENST00000611969 ROCK2O75116 1388 aaKnown RBP19.71■□□□□ 0.75
LINC00116-203ENST00000611969 DDX54Q8TDD1 881 aaKnown RBP19.71■□□□□ 0.75
LINC00116-203ENST00000611969 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
LINC00116-203ENST00000611969 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms