RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 POTEAQ6S8J7 498 aa10.2□□□□□ -0.78
CBWD1-219ENST00000611457 POGKQ9P215 609 aa10.2□□□□□ -0.78
CBWD1-219ENST00000611457 ARHGEF25Q86VW2 580 aa10.2□□□□□ -0.78
CBWD1-219ENST00000611457 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
CBWD1-219ENST00000611457 HMGB2P26583 209 aaKnown RBP10.19□□□□□ -0.78
CBWD1-219ENST00000611457 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
CBWD1-219ENST00000611457 NGLY1Q96IV0 654 aa10.19□□□□□ -0.78
CBWD1-219ENST00000611457 KDRP35968 1356 aa10.18□□□□□ -0.78
CBWD1-219ENST00000611457 ESCO1Q5FWF5 840 aa10.18□□□□□ -0.78
CBWD1-219ENST00000611457 SCN7AQ01118 1682 aa10.18□□□□□ -0.78
CBWD1-219ENST00000611457 N4BP2Q86UW6 1770 aaPredicted RBP10.18□□□□□ -0.78
CBWD1-219ENST00000611457 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
CBWD1-219ENST00000611457 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
CBWD1-219ENST00000611457 ILDR2Q71H61 639 aa10.17□□□□□ -0.78
CBWD1-219ENST00000611457 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
CBWD1-219ENST00000611457 WDR17Q8IZU2 1322 aa10.17□□□□□ -0.78
CBWD1-219ENST00000611457 MAP3K5Q99683 1374 aa10.16□□□□□ -0.78
CBWD1-219ENST00000611457 PIP4K2BP78356 416 aa10.16□□□□□ -0.78
CBWD1-219ENST00000611457 BRCA1P38398 1863 aaKnown RBP10.16□□□□□ -0.78
CBWD1-219ENST00000611457 C4AP0C0L4 1744 aa10.16□□□□□ -0.78
CBWD1-219ENST00000611457 C4BP0C0L5 1744 aa10.16□□□□□ -0.78
CBWD1-219ENST00000611457 TERF2IPQ9NYB0 399 aa10.16□□□□□ -0.78
CBWD1-219ENST00000611457 SIN3AQ96ST3 1273 aa10.15□□□□□ -0.78
CBWD1-219ENST00000611457 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
CBWD1-219ENST00000611457 RXRBP28702 533 aa10.15□□□□□ -0.78
CBWD1-219ENST00000611457 TMF1P82094 1093 aa10.15□□□□□ -0.78
CBWD1-219ENST00000611457 BCANQ96GW7 911 aa10.15□□□□□ -0.78
CBWD1-219ENST00000611457 KIAA0232Q92628 1395 aa10.15□□□□□ -0.78
CBWD1-219ENST00000611457 MAP3K19Q56UN5 1328 aa10.14□□□□□ -0.79
CBWD1-219ENST00000611457 CARD11Q9BXL7 1154 aa10.13□□□□□ -0.79
CBWD1-219ENST00000611457 FLT4P35916 1363 aa10.13□□□□□ -0.79
CBWD1-219ENST00000611457 DLG5Q8TDM6 1919 aa10.13□□□□□ -0.79
CBWD1-219ENST00000611457 MINK1Q8N4C8 1332 aaPredicted RBP10.13□□□□□ -0.79
CBWD1-219ENST00000611457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.79
CBWD1-219ENST00000611457 FAM83GA6ND36 823 aa10.13□□□□□ -0.79
CBWD1-219ENST00000611457 NCBP3Q53F19 620 aaKnown RBP10.13□□□□□ -0.79
CBWD1-219ENST00000611457 LAMB2P55268 1798 aa10.12□□□□□ -0.79
CBWD1-219ENST00000611457 IP6K1Q92551 441 aa10.11□□□□□ -0.79
CBWD1-219ENST00000611457 USP21Q9UK80 565 aa10.11□□□□□ -0.79
CBWD1-219ENST00000611457 KDM2AQ9Y2K7 1162 aa10.11□□□□□ -0.79
CBWD1-219ENST00000611457 NKX1-1Q15270 411 aaPredicted RBP10.11□□□□□ -0.79
CBWD1-219ENST00000611457 HDGFL2Q7Z4V5 671 aaPredicted RBP10.11□□□□□ -0.79
CBWD1-219ENST00000611457 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
CBWD1-219ENST00000611457 UPF1Q92900 1129 aaKnown RBP eCLIP10.1□□□□□ -0.79
CBWD1-219ENST00000611457 ARFGEF1Q9Y6D6 1849 aa10.1□□□□□ -0.79
CBWD1-219ENST00000611457 ERBB3P21860 1342 aa10.1□□□□□ -0.79
CBWD1-219ENST00000611457 GCP02774 474 aa10.1□□□□□ -0.79
CBWD1-219ENST00000611457 STK26Q9P289 416 aa10.1□□□□□ -0.79
CBWD1-219ENST00000611457 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
CBWD1-219ENST00000611457 FOXO3O43524 673 aa10.09□□□□□ -0.79
CBWD1-219ENST00000611457 RGL2O15211 777 aa10.08□□□□□ -0.8
CBWD1-219ENST00000611457 ANKRD36CQ5JPF3 1778 aa10.08□□□□□ -0.8
CBWD1-219ENST00000611457 CABP1Q9NZU7 370 aa10.08□□□□□ -0.8
CBWD1-219ENST00000611457 QTRT2Q9H974 415 aaKnown RBP10.07□□□□□ -0.8
CBWD1-219ENST00000611457 MEGF6O75095 1541 aa10.07□□□□□ -0.8
CBWD1-219ENST00000611457 PLSCR1O15162 318 aa10.07□□□□□ -0.8
CBWD1-219ENST00000611457 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
CBWD1-219ENST00000611457 KCPQ6ZWJ8 1503 aa10.06□□□□□ -0.8
CBWD1-219ENST00000611457 IGSF1Q8N6C5 1336 aa10.05□□□□□ -0.8
CBWD1-219ENST00000611457 ST20-MTHFSA0A0A6YYL1 179 aa10.05□□□□□ -0.8
CBWD1-219ENST00000611457 TCP11L2Q8N4U5 519 aa10.05□□□□□ -0.8
CBWD1-219ENST00000611457 CABP2Q9NPB3 220 aa10.05□□□□□ -0.8
CBWD1-219ENST00000611457 NGDNQ8NEJ9 315 aaKnown RBP10.05□□□□□ -0.8
CBWD1-219ENST00000611457 EIF4G2P78344 907 aaKnown RBP eCLIP10.04□□□□□ -0.8
CBWD1-219ENST00000611457 CACNA1FO60840 1977 aa10.04□□□□□ -0.8
CBWD1-219ENST00000611457 IBTKQ9P2D0 1353 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-219ENST00000611457 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
CBWD1-219ENST00000611457 FYB1O15117 783 aa10.04□□□□□ -0.8
CBWD1-219ENST00000611457 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
CBWD1-219ENST00000611457 PHF23Q9BUL5 403 aaPredicted RBP10.03□□□□□ -0.8
CBWD1-219ENST00000611457 CARD14Q9BXL6 1004 aa10.03□□□□□ -0.8
CBWD1-219ENST00000611457 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.8
CBWD1-219ENST00000611457 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.81
CBWD1-219ENST00000611457 DDX17Q92841 729 aaKnown RBP10.02□□□□□ -0.81
CBWD1-219ENST00000611457 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
CBWD1-219ENST00000611457 MEX3CQ5U5Q3 659 aaKnown RBP10.01□□□□□ -0.81
CBWD1-219ENST00000611457 HOXC9P31274 260 aa10.01□□□□□ -0.81
CBWD1-219ENST00000611457 LRRC37AA6NMS7 1700 aa10□□□□□ -0.81
CBWD1-219ENST00000611457 RIC1Q4ADV7 1423 aa10□□□□□ -0.81
CBWD1-219ENST00000611457 LAMB1P07942 1786 aa10□□□□□ -0.81
CBWD1-219ENST00000611457 ABTB2Q8N961 1025 aa9.99□□□□□ -0.81
CBWD1-219ENST00000611457 CAMKK2Q96RR4 588 aa9.99□□□□□ -0.81
CBWD1-219ENST00000611457 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
CBWD1-219ENST00000611457 KIF7Q2M1P5 1343 aa9.99□□□□□ -0.81
CBWD1-219ENST00000611457 CENPBP07199 599 aaPredicted RBP9.99□□□□□ -0.81
CBWD1-219ENST00000611457 KRT27Q7Z3Y8 459 aa9.99□□□□□ -0.81
CBWD1-219ENST00000611457 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
CBWD1-219ENST00000611457 PMFBP1Q8TBY8 1022 aa9.98□□□□□ -0.81
CBWD1-219ENST00000611457 BTG4Q9NY30 223 aa9.98□□□□□ -0.81
CBWD1-219ENST00000611457 SEPT12Q8IYM1 358 aa9.97□□□□□ -0.81
CBWD1-219ENST00000611457 C8orf37Q96NL8 207 aa9.97□□□□□ -0.81
CBWD1-219ENST00000611457 CHD4Q14839 1912 aa9.96□□□□□ -0.82
CBWD1-219ENST00000611457 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.82
CBWD1-219ENST00000611457 COG3Q96JB2 828 aa9.96□□□□□ -0.82
CBWD1-219ENST00000611457 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
CBWD1-219ENST00000611457 HIRIP3Q9BW71 556 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-219ENST00000611457 CEMIPQ8WUJ3 1361 aa9.95□□□□□ -0.82
CBWD1-219ENST00000611457 SLC12A5Q9H2X9 1139 aa9.95□□□□□ -0.82
CBWD1-219ENST00000611457 PRDM11Q9NQV5 511 aa9.95□□□□□ -0.82
CBWD1-219ENST00000611457 DDX60Q8IY21 1712 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms