RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
FDPS-220ENST00000611010 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
FDPS-220ENST00000611010 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
FDPS-220ENST00000611010 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
FDPS-220ENST00000611010 BCL9O00512 1426 aa17.16■□□□□ 0.34
FDPS-220ENST00000611010 LTN1O94822 1766 aa17.16■□□□□ 0.34
FDPS-220ENST00000611010 KCNQ2O43526 872 aa17.16■□□□□ 0.34
FDPS-220ENST00000611010 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
FDPS-220ENST00000611010 YY1P25490 414 aa17.15■□□□□ 0.34
FDPS-220ENST00000611010 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
FDPS-220ENST00000611010 SPON1Q9HCB6 807 aa17.15■□□□□ 0.34
FDPS-220ENST00000611010 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
FDPS-220ENST00000611010 PROM2Q8N271 834 aa17.14■□□□□ 0.33
FDPS-220ENST00000611010 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
FDPS-220ENST00000611010 ABCC6O95255 1503 aa17.14■□□□□ 0.33
FDPS-220ENST00000611010 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.33
FDPS-220ENST00000611010 BTAF1O14981 1849 aa17.13■□□□□ 0.33
FDPS-220ENST00000611010 PLSCR1O15162 318 aa17.13■□□□□ 0.33
FDPS-220ENST00000611010 NLRP6P59044 892 aa17.13■□□□□ 0.33
FDPS-220ENST00000611010 DDB1Q16531 1140 aa17.12■□□□□ 0.33
FDPS-220ENST00000611010 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
FDPS-220ENST00000611010 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
FDPS-220ENST00000611010 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
FDPS-220ENST00000611010 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
FDPS-220ENST00000611010 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
FDPS-220ENST00000611010 PTGER2P43116 358 aa17.09■□□□□ 0.33
FDPS-220ENST00000611010 PCGF6Q9BYE7 350 aa17.09■□□□□ 0.33
FDPS-220ENST00000611010 PPP1R1BQ9UD71 204 aaPredicted RBP17.09■□□□□ 0.33
FDPS-220ENST00000611010 CHD4Q14839 1912 aa17.08■□□□□ 0.33
FDPS-220ENST00000611010 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
FDPS-220ENST00000611010 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
FDPS-220ENST00000611010 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
FDPS-220ENST00000611010 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
FDPS-220ENST00000611010 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
FDPS-220ENST00000611010 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
FDPS-220ENST00000611010 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
FDPS-220ENST00000611010 SOX12O15370 315 aa17.05■□□□□ 0.32
FDPS-220ENST00000611010 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
FDPS-220ENST00000611010 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
FDPS-220ENST00000611010 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
FDPS-220ENST00000611010 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
FDPS-220ENST00000611010 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
FDPS-220ENST00000611010 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
FDPS-220ENST00000611010 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
FDPS-220ENST00000611010 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
FDPS-220ENST00000611010 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
FDPS-220ENST00000611010 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
FDPS-220ENST00000611010 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
FDPS-220ENST00000611010 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
FDPS-220ENST00000611010 SLC15A2Q16348 729 aa17.01■□□□□ 0.31
FDPS-220ENST00000611010 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
FDPS-220ENST00000611010 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
FDPS-220ENST00000611010 ERBB3P21860 1342 aa17■□□□□ 0.31
FDPS-220ENST00000611010 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
FDPS-220ENST00000611010 USP31Q70CQ4 1352 aa17■□□□□ 0.31
FDPS-220ENST00000611010 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
FDPS-220ENST00000611010 LY75O60449 1722 aa16.99■□□□□ 0.31
FDPS-220ENST00000611010 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
FDPS-220ENST00000611010 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
FDPS-220ENST00000611010 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
FDPS-220ENST00000611010 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
FDPS-220ENST00000611010 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
FDPS-220ENST00000611010 GOLGB1Q14789 3259 aaKnown RBP16.97■□□□□ 0.31
FDPS-220ENST00000611010 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
FDPS-220ENST00000611010 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
FDPS-220ENST00000611010 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
FDPS-220ENST00000611010 ZNF827Q17R98 1081 aa16.96■□□□□ 0.31
FDPS-220ENST00000611010 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
FDPS-220ENST00000611010 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
FDPS-220ENST00000611010 EXOC5O00471 708 aa16.95■□□□□ 0.3
FDPS-220ENST00000611010 NME9Q86XW9 330 aa16.95■□□□□ 0.3
FDPS-220ENST00000611010 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
FDPS-220ENST00000611010 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
FDPS-220ENST00000611010 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
FDPS-220ENST00000611010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
FDPS-220ENST00000611010 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
FDPS-220ENST00000611010 EDC4Q6P2E9 1401 aaKnown RBP16.91■□□□□ 0.3
FDPS-220ENST00000611010 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
FDPS-220ENST00000611010 NSD2O96028 1365 aa16.9■□□□□ 0.3
FDPS-220ENST00000611010 IL2RBP14784 551 aa16.9■□□□□ 0.3
FDPS-220ENST00000611010 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
FDPS-220ENST00000611010 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.29
FDPS-220ENST00000611010 MEGF6O75095 1541 aa16.88■□□□□ 0.29
FDPS-220ENST00000611010 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
FDPS-220ENST00000611010 ARXQ96QS3 562 aa16.88■□□□□ 0.29
FDPS-220ENST00000611010 TAF1LQ8IZX4 1826 aa16.87■□□□□ 0.29
FDPS-220ENST00000611010 PNPLA7Q6ZV29 1317 aa16.87■□□□□ 0.29
FDPS-220ENST00000611010 C5P01031 1676 aa16.87■□□□□ 0.29
FDPS-220ENST00000611010 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
FDPS-220ENST00000611010 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
FDPS-220ENST00000611010 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
FDPS-220ENST00000611010 KCNQ4P56696 695 aa16.84■□□□□ 0.29
FDPS-220ENST00000611010 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
FDPS-220ENST00000611010 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
FDPS-220ENST00000611010 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
FDPS-220ENST00000611010 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
FDPS-220ENST00000611010 ITGB4P16144 1822 aa16.8■□□□□ 0.28
FDPS-220ENST00000611010 FBLN1P23142 703 aa16.8■□□□□ 0.28
FDPS-220ENST00000611010 IP6K1Q92551 441 aa16.8■□□□□ 0.28
FDPS-220ENST00000611010 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms