RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 ABCC6O95255 1503 aa18.12■□□□□ 0.49
SNX20-205ENST00000610485 SF3B2Q13435 895 aaKnown RBP18.11■□□□□ 0.49
SNX20-205ENST00000610485 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
SNX20-205ENST00000610485 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
SNX20-205ENST00000610485 SOX12O15370 315 aa18.1■□□□□ 0.49
SNX20-205ENST00000610485 TMF1P82094 1093 aa18.1■□□□□ 0.49
SNX20-205ENST00000610485 FAM182BQ5T319 152 aa18.1■□□□□ 0.49
SNX20-205ENST00000610485 WDR17Q8IZU2 1322 aa18.09■□□□□ 0.49
SNX20-205ENST00000610485 DEFB132Q7Z7B7 95 aa18.09■□□□□ 0.49
SNX20-205ENST00000610485 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.49
SNX20-205ENST00000610485 PARP4Q9UKK3 1724 aaKnown RBP18.07■□□□□ 0.48
SNX20-205ENST00000610485 RGPD1P0DJD0 1748 aa18.06■□□□□ 0.48
SNX20-205ENST00000610485 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
SNX20-205ENST00000610485 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
SNX20-205ENST00000610485 CCER1Q8TC90 406 aaPredicted RBP18.06■□□□□ 0.48
SNX20-205ENST00000610485 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
SNX20-205ENST00000610485 BAG6P46379 1132 aa18.05■□□□□ 0.48
SNX20-205ENST00000610485 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
SNX20-205ENST00000610485 CDCA8Q53HL2 280 aa18.04■□□□□ 0.48
SNX20-205ENST00000610485 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
SNX20-205ENST00000610485 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
SNX20-205ENST00000610485 CARD10Q9BWT7 1032 aa18.03■□□□□ 0.48
SNX20-205ENST00000610485 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
SNX20-205ENST00000610485 WNK3Q9BYP7 1800 aa18.01■□□□□ 0.47
SNX20-205ENST00000610485 CDCA7Q9BWT1 371 aaPredicted RBP18.01■□□□□ 0.47
SNX20-205ENST00000610485 RGPD5Q99666 1765 aa18.01■□□□□ 0.47
SNX20-205ENST00000610485 CCDC7Q96M83 1385 aa18.01■□□□□ 0.47
SNX20-205ENST00000610485 ERBB3P21860 1342 aa18■□□□□ 0.47
SNX20-205ENST00000610485 TRIM37O94972 964 aa18■□□□□ 0.47
SNX20-205ENST00000610485 COG3Q96JB2 828 aa18■□□□□ 0.47
SNX20-205ENST00000610485 LTN1O94822 1766 aa17.99■□□□□ 0.47
SNX20-205ENST00000610485 EN1Q05925 392 aaPredicted RBP17.99■□□□□ 0.47
SNX20-205ENST00000610485 DDB1Q16531 1140 aa17.99■□□□□ 0.47
SNX20-205ENST00000610485 MYOM1P52179 1685 aa17.99■□□□□ 0.47
SNX20-205ENST00000610485 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
SNX20-205ENST00000610485 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
SNX20-205ENST00000610485 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
SNX20-205ENST00000610485 FYB1O15117 783 aa17.96■□□□□ 0.47
SNX20-205ENST00000610485 ANKRD24Q8TF21 1146 aa17.96■□□□□ 0.47
SNX20-205ENST00000610485 IP6K1Q92551 441 aa17.96■□□□□ 0.47
SNX20-205ENST00000610485 PARD3Q8TEW0 1356 aa17.95■□□□□ 0.46
SNX20-205ENST00000610485 CAMKK2Q96RR4 588 aa17.95■□□□□ 0.46
SNX20-205ENST00000610485 BCL9O00512 1426 aa17.95■□□□□ 0.46
SNX20-205ENST00000610485 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
SNX20-205ENST00000610485 APBA3O96018 575 aa17.94■□□□□ 0.46
SNX20-205ENST00000610485 EZH2Q15910 746 aaKnown RBP17.94■□□□□ 0.46
SNX20-205ENST00000610485 GGNBP2Q9H3C7 697 aa17.94■□□□□ 0.46
SNX20-205ENST00000610485 NLRP2Q9NX02 1062 aa17.94■□□□□ 0.46
SNX20-205ENST00000610485 TNS2Q63HR2 1409 aa17.94■□□□□ 0.46
SNX20-205ENST00000610485 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX20-205ENST00000610485 MARCH10Q8NA82 808 aaPredicted RBP17.93■□□□□ 0.46
SNX20-205ENST00000610485 CARD14Q9BXL6 1004 aa17.93■□□□□ 0.46
SNX20-205ENST00000610485 RTL1A6NKG5 1358 aa17.92■□□□□ 0.46
SNX20-205ENST00000610485 NSD3Q9BZ95 1437 aa17.92■□□□□ 0.46
SNX20-205ENST00000610485 HOXC9P31274 260 aa17.92■□□□□ 0.46
SNX20-205ENST00000610485 FAM208AQ9UK61 1670 aaKnown RBP17.91■□□□□ 0.46
SNX20-205ENST00000610485 EXOC5O00471 708 aa17.91■□□□□ 0.46
SNX20-205ENST00000610485 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
SNX20-205ENST00000610485 FBLN1P23142 703 aa17.91■□□□□ 0.46
SNX20-205ENST00000610485 KIF20BQ96Q89 1820 aa17.9■□□□□ 0.46
SNX20-205ENST00000610485 RREB1Q92766 1687 aa17.9■□□□□ 0.46
SNX20-205ENST00000610485 IL2RBP14784 551 aa17.89■□□□□ 0.45
SNX20-205ENST00000610485 AMPHP49418 695 aa17.89■□□□□ 0.45
SNX20-205ENST00000610485 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
SNX20-205ENST00000610485 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
SNX20-205ENST00000610485 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
SNX20-205ENST00000610485 SBF2Q86WG5 1849 aa17.86■□□□□ 0.45
SNX20-205ENST00000610485 PSDA5PKW4 1024 aaPredicted RBP17.86■□□□□ 0.45
SNX20-205ENST00000610485 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
SNX20-205ENST00000610485 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
SNX20-205ENST00000610485 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
SNX20-205ENST00000610485 PLSCR1O15162 318 aa17.85■□□□□ 0.45
SNX20-205ENST00000610485 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
SNX20-205ENST00000610485 PTF1AQ7RTS3 328 aa17.85■□□□□ 0.45
SNX20-205ENST00000610485 SRCAPQ6ZRS2 3230 aa17.84■□□□□ 0.45
SNX20-205ENST00000610485 INSRP06213 1382 aa17.84■□□□□ 0.45
SNX20-205ENST00000610485 FLT4P35916 1363 aa17.84■□□□□ 0.45
SNX20-205ENST00000610485 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
SNX20-205ENST00000610485 R3HDM1Q15032 1099 aaKnown RBP17.84■□□□□ 0.45
SNX20-205ENST00000610485 POLR3GLQ9BT43 218 aa17.84■□□□□ 0.45
SNX20-205ENST00000610485 LRP5O75197 1615 aa17.83■□□□□ 0.45
SNX20-205ENST00000610485 SMG6Q86US8 1419 aaKnown RBP17.82■□□□□ 0.44
SNX20-205ENST00000610485 NHSQ6T4R5 1651 aa17.82■□□□□ 0.44
SNX20-205ENST00000610485 HSP90AB2PQ58FF8 381 aa17.8■□□□□ 0.44
SNX20-205ENST00000610485 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
SNX20-205ENST00000610485 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
SNX20-205ENST00000610485 MEGF6O75095 1541 aa17.8■□□□□ 0.44
SNX20-205ENST00000610485 ANKRD26Q9UPS8 1709 aa17.79■□□□□ 0.44
SNX20-205ENST00000610485 KCNQ2O43526 872 aa17.79■□□□□ 0.44
SNX20-205ENST00000610485 NBPF14Q5TI25 921 aa17.79■□□□□ 0.44
SNX20-205ENST00000610485 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
SNX20-205ENST00000610485 PANK3Q9H999 370 aa17.78■□□□□ 0.44
SNX20-205ENST00000610485 RGPD2P0DJD1 1756 aa17.77■□□□□ 0.44
SNX20-205ENST00000610485 PROM2Q8N271 834 aa17.77■□□□□ 0.44
SNX20-205ENST00000610485 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
SNX20-205ENST00000610485 USHBP1Q8N6Y0 703 aa17.76■□□□□ 0.43
SNX20-205ENST00000610485 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
SNX20-205ENST00000610485 NSD2O96028 1365 aa17.76■□□□□ 0.43
SNX20-205ENST00000610485 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
SNX20-205ENST00000610485 ZCRB1Q8TBF4 217 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms