RNA–Protein interactions for RNA: ENST00000608615.1

AP000345.2-201, humanhuman

TSL 3 BASIC

Gene AP000345.2, Length 1,081 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000345.2-201ENST00000608615 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
AP000345.2-201ENST00000608615 CABP1Q9NZU7 370 aa16.23■□□□□ 0.19
AP000345.2-201ENST00000608615 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
AP000345.2-201ENST00000608615 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
AP000345.2-201ENST00000608615 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
AP000345.2-201ENST00000608615 POLR3AO14802 1390 aaPredicted RBP16.23■□□□□ 0.19
AP000345.2-201ENST00000608615 CRYBG1Q9Y4K1 1723 aa16.22■□□□□ 0.19
AP000345.2-201ENST00000608615 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
AP000345.2-201ENST00000608615 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
AP000345.2-201ENST00000608615 SPDYE2Q495Y8 402 aa16.21■□□□□ 0.19
AP000345.2-201ENST00000608615 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
AP000345.2-201ENST00000608615 NLRP6P59044 892 aa16.2■□□□□ 0.18
AP000345.2-201ENST00000608615 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
AP000345.2-201ENST00000608615 SPATA31A5Q5VU36 1347 aa16.18■□□□□ 0.18
AP000345.2-201ENST00000608615 SPATA31A7Q8IWB4 1347 aa16.18■□□□□ 0.18
AP000345.2-201ENST00000608615 SOX12O15370 315 aa16.17■□□□□ 0.18
AP000345.2-201ENST00000608615 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
AP000345.2-201ENST00000608615 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
AP000345.2-201ENST00000608615 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
AP000345.2-201ENST00000608615 BAG6P46379 1132 aa16.16■□□□□ 0.18
AP000345.2-201ENST00000608615 CIZ1Q9ULV3 898 aaPredicted RBP16.16■□□□□ 0.18
AP000345.2-201ENST00000608615 GCP02774 474 aa16.15■□□□□ 0.18
AP000345.2-201ENST00000608615 USP6P35125 1406 aa16.15■□□□□ 0.18
AP000345.2-201ENST00000608615 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
AP000345.2-201ENST00000608615 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.17
AP000345.2-201ENST00000608615 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
AP000345.2-201ENST00000608615 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
AP000345.2-201ENST00000608615 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
AP000345.2-201ENST00000608615 DEFB132Q7Z7B7 95 aa16.13■□□□□ 0.17
AP000345.2-201ENST00000608615 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
AP000345.2-201ENST00000608615 CSB-PGBD3P0DP91 1061 aa16.12■□□□□ 0.17
AP000345.2-201ENST00000608615 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
AP000345.2-201ENST00000608615 AKAP12Q02952 1782 aa16.12■□□□□ 0.17
AP000345.2-201ENST00000608615 USP19O94966 1318 aa16.12■□□□□ 0.17
AP000345.2-201ENST00000608615 EP400Q96L91 3159 aa16.12■□□□□ 0.17
AP000345.2-201ENST00000608615 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
AP000345.2-201ENST00000608615 RGPD1P0DJD0 1748 aa16.11■□□□□ 0.17
AP000345.2-201ENST00000608615 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
AP000345.2-201ENST00000608615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
AP000345.2-201ENST00000608615 DSG3P32926 999 aa16.1■□□□□ 0.17
AP000345.2-201ENST00000608615 TOM1L2Q6ZVM7 507 aa16.1■□□□□ 0.17
AP000345.2-201ENST00000608615 TCP11L2Q8N4U5 519 aa16.1■□□□□ 0.17
AP000345.2-201ENST00000608615 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
AP000345.2-201ENST00000608615 USP47Q96K76 1375 aa16.1■□□□□ 0.17
AP000345.2-201ENST00000608615 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
AP000345.2-201ENST00000608615 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
AP000345.2-201ENST00000608615 CPDO75976 1380 aa16.09■□□□□ 0.17
AP000345.2-201ENST00000608615 PIK3C2AO00443 1686 aa16.08■□□□□ 0.17
AP000345.2-201ENST00000608615 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
AP000345.2-201ENST00000608615 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.16
AP000345.2-201ENST00000608615 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.16
AP000345.2-201ENST00000608615 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
AP000345.2-201ENST00000608615 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
AP000345.2-201ENST00000608615 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
AP000345.2-201ENST00000608615 TRIM37O94972 964 aa16.06■□□□□ 0.16
AP000345.2-201ENST00000608615 THRAP3Q9Y2W1 955 aaKnown RBP16.06■□□□□ 0.16
AP000345.2-201ENST00000608615 LMO7Q8WWI1 1683 aa16.05■□□□□ 0.16
AP000345.2-201ENST00000608615 CRB1P82279 1406 aa16.05■□□□□ 0.16
AP000345.2-201ENST00000608615 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
AP000345.2-201ENST00000608615 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
AP000345.2-201ENST00000608615 BARGINQ6ZT62 677 aa16.05■□□□□ 0.16
AP000345.2-201ENST00000608615 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
AP000345.2-201ENST00000608615 SLIT3O75094 1523 aa16.04■□□□□ 0.16
AP000345.2-201ENST00000608615 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
AP000345.2-201ENST00000608615 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
AP000345.2-201ENST00000608615 ANP32CO43423 234 aa16.04■□□□□ 0.16
AP000345.2-201ENST00000608615 APBA3O96018 575 aa16.04■□□□□ 0.16
AP000345.2-201ENST00000608615 RGPD5Q99666 1765 aa16.03■□□□□ 0.16
AP000345.2-201ENST00000608615 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.16
AP000345.2-201ENST00000608615 AATKQ6ZMQ8 1374 aa16.02■□□□□ 0.16
AP000345.2-201ENST00000608615 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.16
AP000345.2-201ENST00000608615 PSDA5PKW4 1024 aaPredicted RBP16.02■□□□□ 0.16
AP000345.2-201ENST00000608615 DDB1Q16531 1140 aa16.02■□□□□ 0.16
AP000345.2-201ENST00000608615 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
AP000345.2-201ENST00000608615 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
AP000345.2-201ENST00000608615 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
AP000345.2-201ENST00000608615 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
AP000345.2-201ENST00000608615 NME9Q86XW9 330 aa16■□□□□ 0.15
AP000345.2-201ENST00000608615 WDR17Q8IZU2 1322 aa15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 C11orf95C9JLR9 678 aaPredicted RBP15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 TMF1P82094 1093 aa15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 EZH2Q15910 746 aaKnown RBP15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 LTN1O94822 1766 aa15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 TNS1Q9HBL0 1735 aaKnown RBP15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
AP000345.2-201ENST00000608615 ARHGEF25Q86VW2 580 aa15.98■□□□□ 0.15
AP000345.2-201ENST00000608615 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
AP000345.2-201ENST00000608615 EDC4Q6P2E9 1401 aaKnown RBP15.97■□□□□ 0.15
AP000345.2-201ENST00000608615 CDCA7Q9BWT1 371 aaPredicted RBP15.97■□□□□ 0.15
AP000345.2-201ENST00000608615 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
AP000345.2-201ENST00000608615 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
AP000345.2-201ENST00000608615 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 COG3Q96JB2 828 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 POLR3GLQ9BT43 218 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 AXIN2Q9Y2T1 843 aa15.96■□□□□ 0.15
AP000345.2-201ENST00000608615 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms