RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
RFTN1-212ENST00000607320 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
RFTN1-212ENST00000607320 COL5A2P05997 1499 aaPredicted RBP15.18■□□□□ 0.02
RFTN1-212ENST00000607320 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
RFTN1-212ENST00000607320 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
RFTN1-212ENST00000607320 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
RFTN1-212ENST00000607320 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
RFTN1-212ENST00000607320 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
RFTN1-212ENST00000607320 MON2Q7Z3U7 1717 aa15.16■□□□□ 0.02
RFTN1-212ENST00000607320 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
RFTN1-212ENST00000607320 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
RFTN1-212ENST00000607320 CRB1P82279 1406 aa15.16■□□□□ 0.02
RFTN1-212ENST00000607320 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
RFTN1-212ENST00000607320 KCNH5Q8NCM2 988 aa15.15■□□□□ 0.02
RFTN1-212ENST00000607320 COL18A1P39060 1754 aa15.15■□□□□ 0.02
RFTN1-212ENST00000607320 CPSF1Q10570 1443 aaKnown RBP15.15■□□□□ 0.02
RFTN1-212ENST00000607320 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
RFTN1-212ENST00000607320 PLCB2Q00722 1185 aa15.14■□□□□ 0.01
RFTN1-212ENST00000607320 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
RFTN1-212ENST00000607320 RGPD5Q99666 1765 aa15.13■□□□□ 0.01
RFTN1-212ENST00000607320 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
RFTN1-212ENST00000607320 TRIM37O94972 964 aa15.12■□□□□ 0.01
RFTN1-212ENST00000607320 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
RFTN1-212ENST00000607320 WNK3Q9BYP7 1800 aa15.11■□□□□ 0.01
RFTN1-212ENST00000607320 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
RFTN1-212ENST00000607320 ARHGEF25Q86VW2 580 aa15.11■□□□□ 0.01
RFTN1-212ENST00000607320 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
RFTN1-212ENST00000607320 LRP5O75197 1615 aa15.1■□□□□ 0.01
RFTN1-212ENST00000607320 USP54Q70EL1 1684 aa15.1■□□□□ 0.01
RFTN1-212ENST00000607320 APBA3O96018 575 aa15.1■□□□□ 0.01
RFTN1-212ENST00000607320 HDGFL2Q7Z4V5 671 aaPredicted RBP15.1■□□□□ 0.01
RFTN1-212ENST00000607320 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
RFTN1-212ENST00000607320 ABCC6O95255 1503 aa15.09■□□□□ 0.01
RFTN1-212ENST00000607320 SOX12O15370 315 aa15.09■□□□□ 0.01
RFTN1-212ENST00000607320 EZH2Q15910 746 aaKnown RBP15.09■□□□□ 0.01
RFTN1-212ENST00000607320 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
RFTN1-212ENST00000607320 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
RFTN1-212ENST00000607320 NFAT5O94916 1531 aa15.08■□□□□ 0.01
RFTN1-212ENST00000607320 LRRC37A3O60309 1634 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 PSDA5PKW4 1024 aaPredicted RBP15.08■□□□□ 0
RFTN1-212ENST00000607320 CAMKK2Q96RR4 588 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 CDCA7Q9BWT1 371 aaPredicted RBP15.08■□□□□ 0
RFTN1-212ENST00000607320 AXIN2Q9Y2T1 843 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 USP31Q70CQ4 1352 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 SBF2Q86WG5 1849 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 OVOS2A0A0G2JMS6 1433 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 OVOS2A0A0J9YW53 1432 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 OVOS2Q6IE36 1432 aa15.08■□□□□ 0
RFTN1-212ENST00000607320 RREB1Q92766 1687 aa15.07■□□□□ 0
RFTN1-212ENST00000607320 LTN1O94822 1766 aa15.07■□□□□ 0
RFTN1-212ENST00000607320 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
RFTN1-212ENST00000607320 DDB1Q16531 1140 aa15.07■□□□□ 0
RFTN1-212ENST00000607320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.07■□□□□ 0
RFTN1-212ENST00000607320 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
RFTN1-212ENST00000607320 CD163L1Q9NR16 1453 aa15.07■□□□□ 0
RFTN1-212ENST00000607320 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
RFTN1-212ENST00000607320 PEAK1Q9H792 1746 aa15.06■□□□□ 0
RFTN1-212ENST00000607320 CARD10Q9BWT7 1032 aa15.05■□□□□ -0
RFTN1-212ENST00000607320 SLC12A5Q9H2X9 1139 aa15.05■□□□□ -0
RFTN1-212ENST00000607320 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
RFTN1-212ENST00000607320 NUP188Q5SRE5 1749 aa15.04■□□□□ -0
RFTN1-212ENST00000607320 CCDC7Q96M83 1385 aa15.04■□□□□ -0
RFTN1-212ENST00000607320 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
RFTN1-212ENST00000607320 RGPD3A6NKT7 1758 aaPredicted RBP15.03■□□□□ -0
RFTN1-212ENST00000607320 RGPD4Q7Z3J3 1758 aa15.03■□□□□ -0
RFTN1-212ENST00000607320 A0A1W2PP64 1363 aa15.03■□□□□ -0
RFTN1-212ENST00000607320 NME9Q86XW9 330 aa15.03■□□□□ -0
RFTN1-212ENST00000607320 IFNLR1Q8IU57 520 aaPredicted RBP15.03■□□□□ -0
RFTN1-212ENST00000607320 ST20-MTHFSA0A0A6YYL1 179 aa15.02■□□□□ -0
RFTN1-212ENST00000607320 NBPF14Q5TI25 921 aa15.02■□□□□ -0
RFTN1-212ENST00000607320 TESK2Q96S53 571 aa15.02■□□□□ -0
RFTN1-212ENST00000607320 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
RFTN1-212ENST00000607320 EXOC5O00471 708 aa15□□□□□ -0.01
RFTN1-212ENST00000607320 POLA2Q14181 598 aa15□□□□□ -0.01
RFTN1-212ENST00000607320 BCL9O00512 1426 aa15□□□□□ -0.01
RFTN1-212ENST00000607320 ERBB3P21860 1342 aa14.99□□□□□ -0.01
RFTN1-212ENST00000607320 PLSCR1O15162 318 aa14.99□□□□□ -0.01
RFTN1-212ENST00000607320 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
RFTN1-212ENST00000607320 MARCH10Q8NA82 808 aaPredicted RBP14.98□□□□□ -0.01
RFTN1-212ENST00000607320 TNS2Q63HR2 1409 aa14.98□□□□□ -0.01
RFTN1-212ENST00000607320 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
RFTN1-212ENST00000607320 TMF1P82094 1093 aa14.97□□□□□ -0.01
RFTN1-212ENST00000607320 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
RFTN1-212ENST00000607320 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
RFTN1-212ENST00000607320 USP47Q96K76 1375 aa14.97□□□□□ -0.01
RFTN1-212ENST00000607320 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
RFTN1-212ENST00000607320 COG3Q96JB2 828 aa14.96□□□□□ -0.01
RFTN1-212ENST00000607320 ANKRD36BQ8N2N9 1353 aa14.96□□□□□ -0.02
RFTN1-212ENST00000607320 IL2RBP14784 551 aa14.95□□□□□ -0.02
RFTN1-212ENST00000607320 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
RFTN1-212ENST00000607320 IP6K1Q92551 441 aa14.94□□□□□ -0.02
RFTN1-212ENST00000607320 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
RFTN1-212ENST00000607320 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
RFTN1-212ENST00000607320 NHSQ6T4R5 1651 aa14.93□□□□□ -0.02
RFTN1-212ENST00000607320 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
RFTN1-212ENST00000607320 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
RFTN1-212ENST00000607320 KIF20BQ96Q89 1820 aa14.91□□□□□ -0.02
RFTN1-212ENST00000607320 AMPHP49418 695 aa14.9□□□□□ -0.02
RFTN1-212ENST00000607320 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
RFTN1-212ENST00000607320 CAPN15O75808 1086 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms