RNA–Protein interactions for RNA: ENST00000606170.1

PRDM16-209, Transcript of PR/SET domain 16, humanhuman

TSL 4

Gene PRDM16, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-209ENST00000606170 NINLQ9Y2I6 1382 aa23.55■■□□□ 1.36
PRDM16-209ENST00000606170 TOM1L2Q6ZVM7 507 aa23.55■■□□□ 1.36
PRDM16-209ENST00000606170 THRAP3Q9Y2W1 955 aaKnown RBP23.55■■□□□ 1.36
PRDM16-209ENST00000606170 CRB1P82279 1406 aa23.54■■□□□ 1.36
PRDM16-209ENST00000606170 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
PRDM16-209ENST00000606170 COL18A1P39060 1754 aa23.51■■□□□ 1.35
PRDM16-209ENST00000606170 NFAT5O94916 1531 aa23.51■■□□□ 1.35
PRDM16-209ENST00000606170 CSB-PGBD3P0DP91 1061 aa23.51■■□□□ 1.35
PRDM16-209ENST00000606170 WDR17Q8IZU2 1322 aa23.5■■□□□ 1.35
PRDM16-209ENST00000606170 CDCA8Q53HL2 280 aa23.49■■□□□ 1.35
PRDM16-209ENST00000606170 BAG6P46379 1132 aa23.48■■□□□ 1.35
PRDM16-209ENST00000606170 FAM196AQ6ZSG2 479 aa23.48■■□□□ 1.35
PRDM16-209ENST00000606170 ANKRD36BQ8N2N9 1353 aa23.47■■□□□ 1.35
PRDM16-209ENST00000606170 USP54Q70EL1 1684 aa23.45■■□□□ 1.34
PRDM16-209ENST00000606170 OVOS2A0A0J9YW53 1432 aa23.45■■□□□ 1.34
PRDM16-209ENST00000606170 OVOS2Q6IE36 1432 aa23.45■■□□□ 1.34
PRDM16-209ENST00000606170 TRIM37O94972 964 aa23.45■■□□□ 1.34
PRDM16-209ENST00000606170 COG3Q96JB2 828 aa23.45■■□□□ 1.34
PRDM16-209ENST00000606170 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
PRDM16-209ENST00000606170 EN1Q05925 392 aaPredicted RBP23.43■■□□□ 1.34
PRDM16-209ENST00000606170 CARD10Q9BWT7 1032 aa23.43■■□□□ 1.34
PRDM16-209ENST00000606170 DDB1Q16531 1140 aa23.42■■□□□ 1.34
PRDM16-209ENST00000606170 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
PRDM16-209ENST00000606170 PARP4Q9UKK3 1724 aaKnown RBP23.41■■□□□ 1.34
PRDM16-209ENST00000606170 ABCC6O95255 1503 aa23.4■■□□□ 1.34
PRDM16-209ENST00000606170 ERBB3P21860 1342 aa23.39■■□□□ 1.34
PRDM16-209ENST00000606170 POLR3GLQ9BT43 218 aa23.39■■□□□ 1.33
PRDM16-209ENST00000606170 CDCA7Q9BWT1 371 aaPredicted RBP23.39■■□□□ 1.33
PRDM16-209ENST00000606170 LTN1O94822 1766 aa23.39■■□□□ 1.33
PRDM16-209ENST00000606170 APBA3O96018 575 aa23.38■■□□□ 1.33
PRDM16-209ENST00000606170 ANKRD24Q8TF21 1146 aa23.38■■□□□ 1.33
PRDM16-209ENST00000606170 GGNBP2Q9H3C7 697 aa23.38■■□□□ 1.33
PRDM16-209ENST00000606170 NLRP2Q9NX02 1062 aa23.38■■□□□ 1.33
PRDM16-209ENST00000606170 FYB1O15117 783 aa23.37■■□□□ 1.33
PRDM16-209ENST00000606170 FBLN1P23142 703 aa23.37■■□□□ 1.33
PRDM16-209ENST00000606170 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
PRDM16-209ENST00000606170 CCDC7Q96M83 1385 aa23.37■■□□□ 1.33
PRDM16-209ENST00000606170 LRRC37A3O60309 1634 aa23.36■■□□□ 1.33
PRDM16-209ENST00000606170 TNS1Q9HBL0 1735 aaKnown RBP23.36■■□□□ 1.33
PRDM16-209ENST00000606170 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
PRDM16-209ENST00000606170 EZH2Q15910 746 aaKnown RBP23.35■■□□□ 1.33
PRDM16-209ENST00000606170 IP6K1Q92551 441 aa23.35■■□□□ 1.33
PRDM16-209ENST00000606170 OVOS2A0A0G2JMS6 1433 aa23.34■■□□□ 1.33
PRDM16-209ENST00000606170 AMPHP49418 695 aa23.34■■□□□ 1.33
PRDM16-209ENST00000606170 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
PRDM16-209ENST00000606170 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
PRDM16-209ENST00000606170 DISP2A7MBM2 1401 aa23.33■■□□□ 1.33
PRDM16-209ENST00000606170 C11orf95C9JLR9 678 aaPredicted RBP23.33■■□□□ 1.33
PRDM16-209ENST00000606170 EXOC5O00471 708 aa23.33■■□□□ 1.33
PRDM16-209ENST00000606170 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.32
PRDM16-209ENST00000606170 CARD14Q9BXL6 1004 aa23.32■■□□□ 1.32
PRDM16-209ENST00000606170 HOXC9P31274 260 aa23.31■■□□□ 1.32
PRDM16-209ENST00000606170 RRS1Q15050 365 aaKnown RBP23.31■■□□□ 1.32
PRDM16-209ENST00000606170 MARCH10Q8NA82 808 aaPredicted RBP23.31■■□□□ 1.32
PRDM16-209ENST00000606170 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
PRDM16-209ENST00000606170 MYOM1P52179 1685 aa23.3■■□□□ 1.32
PRDM16-209ENST00000606170 CAMKK2Q96RR4 588 aa23.3■■□□□ 1.32
PRDM16-209ENST00000606170 NSD3Q9BZ95 1437 aa23.3■■□□□ 1.32
PRDM16-209ENST00000606170 PSDA5PKW4 1024 aaPredicted RBP23.29■■□□□ 1.32
PRDM16-209ENST00000606170 IL2RBP14784 551 aa23.29■■□□□ 1.32
PRDM16-209ENST00000606170 PEAK1Q9H792 1746 aa23.27■■□□□ 1.32
PRDM16-209ENST00000606170 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
PRDM16-209ENST00000606170 KIF20BQ96Q89 1820 aa23.25■■□□□ 1.31
PRDM16-209ENST00000606170 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
PRDM16-209ENST00000606170 R3HDM1Q15032 1099 aaKnown RBP23.23■■□□□ 1.31
PRDM16-209ENST00000606170 PTF1AQ7RTS3 328 aa23.23■■□□□ 1.31
PRDM16-209ENST00000606170 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
PRDM16-209ENST00000606170 RTL1A6NKG5 1358 aa23.23■■□□□ 1.31
PRDM16-209ENST00000606170 CGNL1Q0VF96 1302 aa23.21■■□□□ 1.31
PRDM16-209ENST00000606170 BCL9O00512 1426 aa23.2■■□□□ 1.3
PRDM16-209ENST00000606170 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
PRDM16-209ENST00000606170 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
PRDM16-209ENST00000606170 FAM208AQ9UK61 1670 aaKnown RBP23.19■■□□□ 1.3
PRDM16-209ENST00000606170 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
PRDM16-209ENST00000606170 PANK3Q9H999 370 aa23.18■■□□□ 1.3
PRDM16-209ENST00000606170 SMG6Q86US8 1419 aaKnown RBP23.17■■□□□ 1.3
PRDM16-209ENST00000606170 PLSCR1O15162 318 aa23.17■■□□□ 1.3
PRDM16-209ENST00000606170 PPM1GO15355 546 aaPredicted RBP23.17■■□□□ 1.3
PRDM16-209ENST00000606170 NBPF14Q5TI25 921 aa23.17■■□□□ 1.3
PRDM16-209ENST00000606170 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
PRDM16-209ENST00000606170 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
PRDM16-209ENST00000606170 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
PRDM16-209ENST00000606170 EMILIN1Q9Y6C2 1016 aa23.17■■□□□ 1.3
PRDM16-209ENST00000606170 FLT4P35916 1363 aa23.16■■□□□ 1.3
PRDM16-209ENST00000606170 KCNQ2O43526 872 aa23.16■■□□□ 1.3
PRDM16-209ENST00000606170 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
PRDM16-209ENST00000606170 RREB1Q92766 1687 aa23.16■■□□□ 1.3
PRDM16-209ENST00000606170 INSRP06213 1382 aa23.14■■□□□ 1.3
PRDM16-209ENST00000606170 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.29
PRDM16-209ENST00000606170 KIF24Q5T7B8 1368 aa23.14■■□□□ 1.29
PRDM16-209ENST00000606170 NUP188Q5SRE5 1749 aa23.13■■□□□ 1.29
PRDM16-209ENST00000606170 TNNT2P45379 298 aaPredicted RBP23.12■■□□□ 1.29
PRDM16-209ENST00000606170 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
PRDM16-209ENST00000606170 MEGF6O75095 1541 aa23.11■■□□□ 1.29
PRDM16-209ENST00000606170 ZCRB1Q8TBF4 217 aaKnown RBP23.1■■□□□ 1.29
PRDM16-209ENST00000606170 PROM2Q8N271 834 aa23.09■■□□□ 1.29
PRDM16-209ENST00000606170 TXNRD1Q16881 649 aa23.08■■□□□ 1.29
PRDM16-209ENST00000606170 NHSQ6T4R5 1651 aa23.08■■□□□ 1.29
PRDM16-209ENST00000606170 RGPD3A6NKT7 1758 aaPredicted RBP23.08■■□□□ 1.29
PRDM16-209ENST00000606170 RGPD4Q7Z3J3 1758 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms