RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CCDC85AQ96PX6 553 aaPredicted RBP7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 FAM13BQ9NYF5 915 aa7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 GAS2L2Q8NHY3 880 aa7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 CEP126Q9P2H0 1117 aa7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 SETD1AO15047 1707 aaKnown RBP7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 SETD1BQ9UPS6 1966 aaKnown RBP7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 CFAP69A5D8W1 941 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 PAK3O75914 559 aaPredicted RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 UVSSAQ2YD98 709 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 MRRFQ96E11 262 aaKnown RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 MYCBPQ99417 103 aaPredicted RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 SMAPO00193 183 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 MLECQ14165 292 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 RRAGDQ9NQL2 400 aaPredicted RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 FANCAO15360 1455 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 RAD54L2Q9Y4B4 1467 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 RBM46Q8TBY0 533 aaKnown RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 RBM28Q9NW13 759 aaKnown RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 CIZ1Q9ULV3 898 aaPredicted RBP7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 MYO3AQ8NEV4 1616 aa7.23□□□□□ -1.25
COL4A3BP-207ENST00000604926 AMOTL1Q8IY63 956 aa7.22□□□□□ -1.25
COL4A3BP-207ENST00000604926 PAIP2Q9BPZ3 127 aaKnown RBP7.22□□□□□ -1.25
COL4A3BP-207ENST00000604926 CCDC189A1A4V9 331 aa7.22□□□□□ -1.25
COL4A3BP-207ENST00000604926 ARPC5LQ9BPX5 153 aa7.22□□□□□ -1.25
COL4A3BP-207ENST00000604926 RIMS1Q86UR5 1692 aaKnown RBP7.22□□□□□ -1.25
COL4A3BP-207ENST00000604926 IRX5P78411 483 aaPredicted RBP7.22□□□□□ -1.25
COL4A3BP-207ENST00000604926 PES1O00541 588 aaKnown RBP7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 ONECUT3O60422 494 aaPredicted RBP7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 COQ9O75208 318 aa7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 IGHDP01880 384 aa7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 MS4A1P11836 297 aa7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 MICALL1Q8N3F8 863 aa7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 FBXO9Q9UK97 447 aaPredicted RBP7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 COMMD10Q9Y6G5 202 aa7.21□□□□□ -1.25
COL4A3BP-207ENST00000604926 PRAG1Q86YV5 1406 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 TNIKQ9UKE5 1360 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 NHSL1Q5SYE7 1610 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 PPP4CP60510 307 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 ANAPC4Q9UJX5 808 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 MED14O60244 1454 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 NCOA2Q15596 1464 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 PRXQ9BXM0 1461 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 CROCC2H7BZ55 1655 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 ALKQ9UM73 1620 aa7.21□□□□□ -1.26
COL4A3BP-207ENST00000604926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 FAM200BP0CF97 657 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 FAN1Q9Y2M0 1017 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 ERICH4A6NGS2 130 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 NAP1L1P55209 391 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 KLF15Q9UIH9 416 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 WWC3Q9ULE0 1092 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 ABCA6Q8N139 1617 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 C4orf46Q504U0 113 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 TTC30AQ86WT1 665 aa7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 MAP3K20Q9NYL2 800 aaKnown RBP7.2□□□□□ -1.26
COL4A3BP-207ENST00000604926 NEURL4Q96JN8 1562 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 UACAQ9BZF9 1416 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 LRRC27Q9C0I9 530 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 SYNPO2Q9UMS6 1093 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 TCOF1Q13428 1488 aaKnown RBP7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 HMGB1P1B2RPK0 211 aaPredicted RBP7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 LETM1O95202 739 aaPredicted RBP7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 TPM2P07951 284 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 CCDC172P0C7W6 258 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 NAT2P11245 290 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 PAX7P23759 505 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 TERF1P54274 439 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 COPB2P35606 906 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 EVA1CP58658 441 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 C1orf131Q8NDD1 294 aaKnown RBP7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 MAP7D2Q96T17 732 aa7.19□□□□□ -1.26
COL4A3BP-207ENST00000604926 CDC42BPBQ9Y5S2 1711 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 CAPN15O75808 1086 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 CAPN2P17655 700 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 LMNB1P20700 586 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 PSME1Q06323 249 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 GSE1Q14687 1217 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 SBNO2Q9Y2G9 1366 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 DIP2CQ9Y2E4 1556 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 SHPRHQ149N8 1683 aa7.18□□□□□ -1.26
COL4A3BP-207ENST00000604926 ZSCAN20P17040 1043 aaPredicted RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 RANBP17Q9H2T7 1088 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 ISY1Q9ULR0 285 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 DIS3Q9Y2L1 958 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 EEA1Q15075 1411 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 ASXL2Q76L83 1435 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 CNTLNQ9NXG0 1405 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 ICE2Q659A1 982 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 HSCBQ8IWL3 235 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 ENOX1Q8TC92 643 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 RSPH1Q8WYR4 309 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 FAM210AQ96ND0 272 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 CXorf56Q9H5V9 222 aa7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 PRG4Q92954 1404 aaPredicted RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 U2AF1L5P0DN76 240 aaPredicted RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 HMGN5P82970 282 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-207ENST00000604926 U2AF1Q01081 240 aaKnown RBP eCLIP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms