RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 TANGO6Q9C0B7 1094 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 WASHC2CQ9Y4E1 1318 aa8.82□□□□□ -1
TUBE1-207ENST00000604689 GTF2F1P35269 517 aaKnown RBP eCLIP8.81□□□□□ -1
TUBE1-207ENST00000604689 HMGN5P82970 282 aaKnown RBP8.81□□□□□ -1
TUBE1-207ENST00000604689 VAC14Q08AM6 782 aa8.81□□□□□ -1
TUBE1-207ENST00000604689 HDAC1Q13547 482 aaPredicted RBP8.81□□□□□ -1
TUBE1-207ENST00000604689 NFKBIBQ15653 356 aa8.81□□□□□ -1
TUBE1-207ENST00000604689 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.81□□□□□ -1
TUBE1-207ENST00000604689 FBXO22Q8NEZ5 403 aa8.81□□□□□ -1
TUBE1-207ENST00000604689 ZFYVE27Q5T4F4 411 aa8.81□□□□□ -1
TUBE1-207ENST00000604689 TFIP11Q9UBB9 837 aaKnown RBP8.81□□□□□ -1
TUBE1-207ENST00000604689 TRIM6-TRIM34B2RNG4 842 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 SCP2P22307 547 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 MYSM1Q5VVJ2 828 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 TRIM34Q9BYJ4 488 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 CRISPLD2Q9H0B8 497 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 LMNB1P20700 586 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 RHBDL3P58872 404 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 HSCBQ8IWL3 235 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 POLA1P09884 1462 aaPredicted RBP8.8□□□□□ -1
TUBE1-207ENST00000604689 TDO2P48775 406 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 WDR78Q5VTH9 848 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 ZCRB1Q8TBF4 217 aaKnown RBP8.8□□□□□ -1
TUBE1-207ENST00000604689 FRMD4BQ9Y2L6 1034 aa8.8□□□□□ -1
TUBE1-207ENST00000604689 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
TUBE1-207ENST00000604689 TMC1Q8TDI8 760 aa8.79□□□□□ -1
TUBE1-207ENST00000604689 CFAP43Q8NDM7 1665 aa8.79□□□□□ -1
TUBE1-207ENST00000604689 EPB41L2O43491 1005 aaKnown RBP8.79□□□□□ -1
TUBE1-207ENST00000604689 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
TUBE1-207ENST00000604689 ZRSR2Q15696 482 aaKnown RBP8.79□□□□□ -1
TUBE1-207ENST00000604689 TONSLQ96HA7 1378 aa8.79□□□□□ -1
TUBE1-207ENST00000604689 NRDCO43847 1150 aa8.79□□□□□ -1
TUBE1-207ENST00000604689 MLECQ14165 292 aa8.79□□□□□ -1
TUBE1-207ENST00000604689 EXOC6Q8TAG9 804 aa8.79□□□□□ -1
TUBE1-207ENST00000604689 FRAT2O75474 233 aaPredicted RBP8.78□□□□□ -1
TUBE1-207ENST00000604689 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
TUBE1-207ENST00000604689 SATB1Q01826 763 aa8.78□□□□□ -1
TUBE1-207ENST00000604689 ZKSCAN2Q63HK3 967 aa8.78□□□□□ -1
TUBE1-207ENST00000604689 DDX12PQ92771 950 aa8.78□□□□□ -1
TUBE1-207ENST00000604689 MYBPC2Q14324 1141 aa8.78□□□□□ -1
TUBE1-207ENST00000604689 PHLDB3Q6NSJ2 640 aa8.78□□□□□ -1
TUBE1-207ENST00000604689 PIF1Q9H611 641 aa8.78□□□□□ -1
TUBE1-207ENST00000604689 RRAGDQ9NQL2 400 aaPredicted RBP8.78□□□□□ -1
TUBE1-207ENST00000604689 hCG_2014768A0A024R1R8 64 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 MTA3Q9BTC8 594 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 TSPYL2Q9H2G4 693 aaPredicted RBP8.77□□□□□ -1.01
TUBE1-207ENST00000604689 RIMBP3CA6NJZ7 1639 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 RIMBP3BA6NNM3 1639 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 RIMBP3Q9UFD9 1639 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 TPM2P07951 284 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 CAMK2BQ13554 666 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 UCN2Q96RP3 112 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 EEA1Q15075 1411 aa8.77□□□□□ -1.01
TUBE1-207ENST00000604689 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
TUBE1-207ENST00000604689 NLGN1Q8N2Q7 840 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 FAM161BQ96MY7 647 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 MAP7D2Q96T17 732 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 BACH2Q9BYV9 841 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 ZNF771Q7L3S4 317 aaPredicted RBP8.76□□□□□ -1.01
TUBE1-207ENST00000604689 SETD5Q9C0A6 1442 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 STK10O94804 968 aaKnown RBP8.76□□□□□ -1.01
TUBE1-207ENST00000604689 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 KRBA2Q6ZNG9 492 aa8.76□□□□□ -1.01
TUBE1-207ENST00000604689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.01
TUBE1-207ENST00000604689 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
TUBE1-207ENST00000604689 MFSD10Q14728 455 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 SF3A1Q15459 793 aaKnown RBP8.75□□□□□ -1.01
TUBE1-207ENST00000604689 CXorf38Q8TB03 319 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 PMM1Q92871 262 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 IQGAP2Q13576 1575 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 BIRC2Q13490 618 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 SPOCK3Q9BQ16 436 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 RRBP1Q9P2E9 1410 aaKnown RBP8.75□□□□□ -1.01
TUBE1-207ENST00000604689 PLIN1O60240 522 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 TERF1P54274 439 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 PDAP1Q13442 181 aaKnown RBP8.75□□□□□ -1.01
TUBE1-207ENST00000604689 SPACA7Q96KW9 195 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 PRKRIP1Q9H875 184 aaPredicted RBP8.75□□□□□ -1.01
TUBE1-207ENST00000604689 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
TUBE1-207ENST00000604689 TMEM164Q5U3C3 297 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 ABCA8O94911 1581 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 WDHD1O75717 1129 aaPredicted RBP8.74□□□□□ -1.01
TUBE1-207ENST00000604689 KIF20AO95235 890 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 MECOMQ03112 1051 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 MEX3CQ5U5Q3 659 aaKnown RBP8.74□□□□□ -1.01
TUBE1-207ENST00000604689 RPAINQ86UA6 219 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 LARGE2Q8N3Y3 721 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 SUDS3Q9H7L9 328 aaPredicted RBP8.74□□□□□ -1.01
TUBE1-207ENST00000604689 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
TUBE1-207ENST00000604689 ZBED9Q6R2W3 1325 aa8.74□□□□□ -1.01
TUBE1-207ENST00000604689 FAM135AQ9P2D6 1515 aa8.73□□□□□ -1.01
TUBE1-207ENST00000604689 TNNI2P48788 182 aa8.73□□□□□ -1.01
TUBE1-207ENST00000604689 TMA7Q9Y2S6 64 aaKnown RBP8.73□□□□□ -1.01
TUBE1-207ENST00000604689 AP1G2O75843 785 aa8.73□□□□□ -1.01
TUBE1-207ENST00000604689 DMTNQ08495 405 aa8.73□□□□□ -1.01
TUBE1-207ENST00000604689 NPAS4Q8IUM7 802 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms