RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 NLRP6P59044 892 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 COL18A1P39060 1754 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 CAMTA1Q9Y6Y1 1673 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 CPDO75976 1380 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
DDX55P1-201ENST00000603334 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
DDX55P1-201ENST00000603334 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
DDX55P1-201ENST00000603334 CARD14Q9BXL6 1004 aa13.9□□□□□ -0.18
DDX55P1-201ENST00000603334 BTG4Q9NY30 223 aa13.9□□□□□ -0.18
DDX55P1-201ENST00000603334 CCDC184Q52MB2 194 aa13.9□□□□□ -0.19
DDX55P1-201ENST00000603334 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.19
DDX55P1-201ENST00000603334 GCP02774 474 aa13.89□□□□□ -0.19
DDX55P1-201ENST00000603334 NSD3Q9BZ95 1437 aa13.88□□□□□ -0.19
DDX55P1-201ENST00000603334 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
DDX55P1-201ENST00000603334 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
DDX55P1-201ENST00000603334 RGPD5Q99666 1765 aa13.88□□□□□ -0.19
DDX55P1-201ENST00000603334 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
DDX55P1-201ENST00000603334 PRDM11Q9NQV5 511 aa13.87□□□□□ -0.19
DDX55P1-201ENST00000603334 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 SPATA31A5Q5VU36 1347 aa13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 SPATA31A7Q8IWB4 1347 aa13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 SEPT12Q8IYM1 358 aa13.86□□□□□ -0.19
DDX55P1-201ENST00000603334 NFAT5O94916 1531 aa13.85□□□□□ -0.19
DDX55P1-201ENST00000603334 COL5A2P05997 1499 aaPredicted RBP13.84□□□□□ -0.19
DDX55P1-201ENST00000603334 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
DDX55P1-201ENST00000603334 AATKQ6ZMQ8 1374 aa13.84□□□□□ -0.19
DDX55P1-201ENST00000603334 NPC1L1Q9UHC9 1359 aa13.84□□□□□ -0.19
DDX55P1-201ENST00000603334 SPATA31A1Q5TZJ5 1347 aa13.84□□□□□ -0.19
DDX55P1-201ENST00000603334 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.19
DDX55P1-201ENST00000603334 NME9Q86XW9 330 aa13.83□□□□□ -0.2
DDX55P1-201ENST00000603334 COG3Q96JB2 828 aa13.83□□□□□ -0.2
DDX55P1-201ENST00000603334 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 TNNT2P45379 298 aaPredicted RBP13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 ARHGEF25Q86VW2 580 aa13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 OVOS2A0A0J9YW53 1432 aa13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 OVOS2Q6IE36 1432 aa13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 TNS1Q9HBL0 1735 aaKnown RBP13.82□□□□□ -0.2
DDX55P1-201ENST00000603334 FYB1O15117 783 aa13.81□□□□□ -0.2
DDX55P1-201ENST00000603334 LTN1O94822 1766 aa13.81□□□□□ -0.2
DDX55P1-201ENST00000603334 ABCC6O95255 1503 aa13.81□□□□□ -0.2
DDX55P1-201ENST00000603334 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
DDX55P1-201ENST00000603334 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
DDX55P1-201ENST00000603334 GGNBP2Q9H3C7 697 aa13.8□□□□□ -0.2
DDX55P1-201ENST00000603334 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
DDX55P1-201ENST00000603334 BLMP54132 1417 aaPredicted RBP13.79□□□□□ -0.2
DDX55P1-201ENST00000603334 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
DDX55P1-201ENST00000603334 NSD2O96028 1365 aa13.79□□□□□ -0.2
DDX55P1-201ENST00000603334 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX55P1-201ENST00000603334 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
DDX55P1-201ENST00000603334 STRN4Q9NRL3 753 aa13.79□□□□□ -0.2
DDX55P1-201ENST00000603334 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
DDX55P1-201ENST00000603334 LRRC37A3O60309 1634 aa13.78□□□□□ -0.2
DDX55P1-201ENST00000603334 EVA1CP58658 441 aa13.78□□□□□ -0.2
DDX55P1-201ENST00000603334 AXIN2Q9Y2T1 843 aa13.78□□□□□ -0.2
DDX55P1-201ENST00000603334 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
DDX55P1-201ENST00000603334 PEAK1Q9H792 1746 aa13.77□□□□□ -0.21
DDX55P1-201ENST00000603334 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
DDX55P1-201ENST00000603334 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
DDX55P1-201ENST00000603334 BARGINQ6ZT62 677 aa13.76□□□□□ -0.21
DDX55P1-201ENST00000603334 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
DDX55P1-201ENST00000603334 CRB1P82279 1406 aa13.75□□□□□ -0.21
DDX55P1-201ENST00000603334 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX55P1-201ENST00000603334 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
DDX55P1-201ENST00000603334 ANKRD26Q9UPS8 1709 aa13.75□□□□□ -0.21
DDX55P1-201ENST00000603334 USP35Q9P2H5 1018 aa13.74□□□□□ -0.21
DDX55P1-201ENST00000603334 SBF2Q86WG5 1849 aa13.74□□□□□ -0.21
DDX55P1-201ENST00000603334 RTL1A6NKG5 1358 aa13.74□□□□□ -0.21
DDX55P1-201ENST00000603334 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 IP6K1Q92551 441 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 MAP2P11137 1827 aaKnown RBP13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 A0A0G2JS52 829 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 SOX12O15370 315 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 MYT1Q01538 1121 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 TCP11L2Q8N4U5 519 aa13.73□□□□□ -0.21
DDX55P1-201ENST00000603334 MTHFSP49914 203 aa13.72□□□□□ -0.21
DDX55P1-201ENST00000603334 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
DDX55P1-201ENST00000603334 DISP2A7MBM2 1401 aa13.71□□□□□ -0.21
DDX55P1-201ENST00000603334 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.22
DDX55P1-201ENST00000603334 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.22
DDX55P1-201ENST00000603334 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.22
DDX55P1-201ENST00000603334 AMPHP49418 695 aa13.7□□□□□ -0.22
DDX55P1-201ENST00000603334 ERBB3P21860 1342 aa13.7□□□□□ -0.22
DDX55P1-201ENST00000603334 RREB1Q92766 1687 aa13.7□□□□□ -0.22
DDX55P1-201ENST00000603334 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
DDX55P1-201ENST00000603334 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
DDX55P1-201ENST00000603334 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
DDX55P1-201ENST00000603334 HOXC9P31274 260 aa13.69□□□□□ -0.22
DDX55P1-201ENST00000603334 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
DDX55P1-201ENST00000603334 FLT4P35916 1363 aa13.68□□□□□ -0.22
DDX55P1-201ENST00000603334 CSB-PGBD3P0DP91 1061 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms