RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
CCDC61-208ENST00000601763 BRWD3Q6RI45 1802 aa22.28■■□□□ 1.16
CCDC61-208ENST00000601763 KIF20BQ96Q89 1820 aa22.28■■□□□ 1.16
CCDC61-208ENST00000601763 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
CCDC61-208ENST00000601763 LTN1O94822 1766 aa22.27■■□□□ 1.16
CCDC61-208ENST00000601763 PANK3Q9H999 370 aa22.27■■□□□ 1.16
CCDC61-208ENST00000601763 USP35Q9P2H5 1018 aa22.27■■□□□ 1.16
CCDC61-208ENST00000601763 EVA1CP58658 441 aa22.26■■□□□ 1.15
CCDC61-208ENST00000601763 SEPT12Q8IYM1 358 aa22.26■■□□□ 1.15
CCDC61-208ENST00000601763 COG3Q96JB2 828 aa22.26■■□□□ 1.15
CCDC61-208ENST00000601763 ONECUT3O60422 494 aaPredicted RBP22.24■■□□□ 1.15
CCDC61-208ENST00000601763 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
CCDC61-208ENST00000601763 THSD7AQ9UPZ6 1657 aa22.21■■□□□ 1.15
CCDC61-208ENST00000601763 RRS1Q15050 365 aaKnown RBP22.21■■□□□ 1.15
CCDC61-208ENST00000601763 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
CCDC61-208ENST00000601763 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
CCDC61-208ENST00000601763 A0A0G2JS52 829 aa22.2■■□□□ 1.14
CCDC61-208ENST00000601763 MYT1Q01538 1121 aa22.2■■□□□ 1.14
CCDC61-208ENST00000601763 FAM182BQ5T319 152 aa22.19■■□□□ 1.14
CCDC61-208ENST00000601763 UPF1Q92900 1129 aaKnown RBP eCLIP22.19■■□□□ 1.14
CCDC61-208ENST00000601763 CRB1P82279 1406 aa22.18■■□□□ 1.14
CCDC61-208ENST00000601763 WDR17Q8IZU2 1322 aa22.18■■□□□ 1.14
CCDC61-208ENST00000601763 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
CCDC61-208ENST00000601763 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
CCDC61-208ENST00000601763 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
CCDC61-208ENST00000601763 ABCC6O95255 1503 aa22.16■■□□□ 1.14
CCDC61-208ENST00000601763 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
CCDC61-208ENST00000601763 HOXC9P31274 260 aa22.15■■□□□ 1.14
CCDC61-208ENST00000601763 IP6K1Q92551 441 aa22.15■■□□□ 1.14
CCDC61-208ENST00000601763 EP400Q96L91 3159 aa22.15■■□□□ 1.14
CCDC61-208ENST00000601763 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
CCDC61-208ENST00000601763 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
CCDC61-208ENST00000601763 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
CCDC61-208ENST00000601763 ERBB3P21860 1342 aa22.13■■□□□ 1.13
CCDC61-208ENST00000601763 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
CCDC61-208ENST00000601763 BARGINQ6ZT62 677 aa22.13■■□□□ 1.13
CCDC61-208ENST00000601763 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
CCDC61-208ENST00000601763 ANKRD26Q9UPS8 1709 aa22.12■■□□□ 1.13
CCDC61-208ENST00000601763 KRT27Q7Z3Y8 459 aa22.12■■□□□ 1.13
CCDC61-208ENST00000601763 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
CCDC61-208ENST00000601763 AMPHP49418 695 aa22.11■■□□□ 1.13
CCDC61-208ENST00000601763 RGPD2P0DJD1 1756 aa22.11■■□□□ 1.13
CCDC61-208ENST00000601763 WNK3Q9BYP7 1800 aa22.1■■□□□ 1.13
CCDC61-208ENST00000601763 CARD10Q9BWT7 1032 aa22.1■■□□□ 1.13
CCDC61-208ENST00000601763 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
CCDC61-208ENST00000601763 HSP90AB2PQ58FF8 381 aa22.09■■□□□ 1.13
CCDC61-208ENST00000601763 AMER1Q5JTC6 1135 aaPredicted RBP22.09■■□□□ 1.13
CCDC61-208ENST00000601763 NLRP2Q9NX02 1062 aa22.09■■□□□ 1.13
CCDC61-208ENST00000601763 THRAP3Q9Y2W1 955 aaKnown RBP22.08■■□□□ 1.13
CCDC61-208ENST00000601763 DISP2A7MBM2 1401 aa22.07■■□□□ 1.12
CCDC61-208ENST00000601763 LRRC37A3O60309 1634 aa22.07■■□□□ 1.12
CCDC61-208ENST00000601763 PARP4Q9UKK3 1724 aaKnown RBP22.07■■□□□ 1.12
CCDC61-208ENST00000601763 MAP2P11137 1827 aaKnown RBP22.06■■□□□ 1.12
CCDC61-208ENST00000601763 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
CCDC61-208ENST00000601763 KNSTRNQ9Y448 316 aa22.06■■□□□ 1.12
CCDC61-208ENST00000601763 RTL1A6NKG5 1358 aa22.05■■□□□ 1.12
CCDC61-208ENST00000601763 PPM1GO15355 546 aaPredicted RBP22.05■■□□□ 1.12
CCDC61-208ENST00000601763 CNGB1Q14028 1251 aaPredicted RBP22.05■■□□□ 1.12
CCDC61-208ENST00000601763 USHBP1Q8N6Y0 703 aa22.04■■□□□ 1.12
CCDC61-208ENST00000601763 NBPF6Q5VWK0 638 aa22.03■■□□□ 1.12
CCDC61-208ENST00000601763 NBPF4Q96M43 638 aa22.03■■□□□ 1.12
CCDC61-208ENST00000601763 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
CCDC61-208ENST00000601763 INSRP06213 1382 aa22.02■■□□□ 1.12
CCDC61-208ENST00000601763 FLT4P35916 1363 aa22.02■■□□□ 1.12
CCDC61-208ENST00000601763 CC2D1BQ5T0F9 858 aaKnown RBP22.02■■□□□ 1.12
CCDC61-208ENST00000601763 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
CCDC61-208ENST00000601763 NSD2O96028 1365 aa22.01■■□□□ 1.11
CCDC61-208ENST00000601763 PDE3BQ13370 1112 aa21.99■■□□□ 1.11
CCDC61-208ENST00000601763 DDB1Q16531 1140 aa21.99■■□□□ 1.11
CCDC61-208ENST00000601763 MARCH10Q8NA82 808 aaPredicted RBP21.99■■□□□ 1.11
CCDC61-208ENST00000601763 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
CCDC61-208ENST00000601763 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
CCDC61-208ENST00000601763 MEGF6O75095 1541 aa21.96■■□□□ 1.11
CCDC61-208ENST00000601763 IL2RBP14784 551 aa21.96■■□□□ 1.11
CCDC61-208ENST00000601763 PTF1AQ7RTS3 328 aa21.96■■□□□ 1.11
CCDC61-208ENST00000601763 SMG6Q86US8 1419 aaKnown RBP21.95■■□□□ 1.1
CCDC61-208ENST00000601763 TRIM37O94972 964 aa21.94■■□□□ 1.1
CCDC61-208ENST00000601763 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
CCDC61-208ENST00000601763 TNS2Q63HR2 1409 aa21.94■■□□□ 1.1
CCDC61-208ENST00000601763 TNS1Q9HBL0 1735 aaKnown RBP21.94■■□□□ 1.1
CCDC61-208ENST00000601763 EXOC5O00471 708 aa21.93■■□□□ 1.1
CCDC61-208ENST00000601763 CDCA7Q9BWT1 371 aaPredicted RBP21.93■■□□□ 1.1
CCDC61-208ENST00000601763 FAM196AQ6ZSG2 479 aa21.92■■□□□ 1.1
CCDC61-208ENST00000601763 EYA1Q99502 592 aa21.92■■□□□ 1.1
CCDC61-208ENST00000601763 SHANK3Q9BYB0 1731 aa21.9■■□□□ 1.1
CCDC61-208ENST00000601763 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
CCDC61-208ENST00000601763 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.1
CCDC61-208ENST00000601763 NPC1L1Q9UHC9 1359 aa21.89■■□□□ 1.1
CCDC61-208ENST00000601763 CCDC125Q86Z20 511 aa21.89■■□□□ 1.09
CCDC61-208ENST00000601763 SBF2Q86WG5 1849 aa21.89■■□□□ 1.09
CCDC61-208ENST00000601763 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.09
CCDC61-208ENST00000601763 NCAPD2Q15021 1401 aa21.89■■□□□ 1.09
CCDC61-208ENST00000601763 MTHFSP49914 203 aa21.88■■□□□ 1.09
CCDC61-208ENST00000601763 EN1Q05925 392 aaPredicted RBP21.87■■□□□ 1.09
CCDC61-208ENST00000601763 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
CCDC61-208ENST00000601763 DDX54Q8TDD1 881 aaKnown RBP21.86■■□□□ 1.09
CCDC61-208ENST00000601763 KCNQ2O43526 872 aa21.85■■□□□ 1.09
CCDC61-208ENST00000601763 SF3B2Q13435 895 aaKnown RBP21.84■■□□□ 1.09
CCDC61-208ENST00000601763 ZCRB1Q8TBF4 217 aaKnown RBP21.84■■□□□ 1.09
CCDC61-208ENST00000601763 ACSBG1Q96GR2 724 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms