RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.28
LINC00649-212ENST00000601471 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
LINC00649-212ENST00000601471 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
LINC00649-212ENST00000601471 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
LINC00649-212ENST00000601471 FYB1O15117 783 aa13.32□□□□□ -0.28
LINC00649-212ENST00000601471 LARP1Q6PKG0 1096 aaKnown RBP13.32□□□□□ -0.28
LINC00649-212ENST00000601471 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
LINC00649-212ENST00000601471 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00649-212ENST00000601471 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
LINC00649-212ENST00000601471 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
LINC00649-212ENST00000601471 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
LINC00649-212ENST00000601471 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
LINC00649-212ENST00000601471 FAM98CQ17RN3 349 aaKnown RBP13.3□□□□□ -0.28
LINC00649-212ENST00000601471 COG3Q96JB2 828 aa13.3□□□□□ -0.28
LINC00649-212ENST00000601471 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
LINC00649-212ENST00000601471 THRAP3Q9Y2W1 955 aaKnown RBP13.3□□□□□ -0.28
LINC00649-212ENST00000601471 CCDC9Q9Y3X0 531 aaKnown RBP13.3□□□□□ -0.28
LINC00649-212ENST00000601471 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
LINC00649-212ENST00000601471 PEAK1Q9H792 1746 aa13.29□□□□□ -0.28
LINC00649-212ENST00000601471 ERBB3P21860 1342 aa13.29□□□□□ -0.28
LINC00649-212ENST00000601471 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
LINC00649-212ENST00000601471 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
LINC00649-212ENST00000601471 SOX12O15370 315 aa13.28□□□□□ -0.28
LINC00649-212ENST00000601471 TCP11L2Q8N4U5 519 aa13.28□□□□□ -0.28
LINC00649-212ENST00000601471 KIF24Q5T7B8 1368 aa13.28□□□□□ -0.28
LINC00649-212ENST00000601471 EVA1CP58658 441 aa13.27□□□□□ -0.29
LINC00649-212ENST00000601471 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.29
LINC00649-212ENST00000601471 GGNBP2Q9H3C7 697 aa13.27□□□□□ -0.29
LINC00649-212ENST00000601471 NSD2O96028 1365 aa13.26□□□□□ -0.29
LINC00649-212ENST00000601471 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
LINC00649-212ENST00000601471 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
LINC00649-212ENST00000601471 CARD10Q9BWT7 1032 aa13.26□□□□□ -0.29
LINC00649-212ENST00000601471 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
LINC00649-212ENST00000601471 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
LINC00649-212ENST00000601471 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
LINC00649-212ENST00000601471 IP6K1Q92551 441 aa13.25□□□□□ -0.29
LINC00649-212ENST00000601471 ZBTB7CA1YPR0 619 aa13.24□□□□□ -0.29
LINC00649-212ENST00000601471 PANK3Q9H999 370 aa13.24□□□□□ -0.29
LINC00649-212ENST00000601471 USP35Q9P2H5 1018 aa13.24□□□□□ -0.29
LINC00649-212ENST00000601471 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
LINC00649-212ENST00000601471 HOXC9P31274 260 aa13.23□□□□□ -0.29
LINC00649-212ENST00000601471 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
LINC00649-212ENST00000601471 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
LINC00649-212ENST00000601471 BCL9O00512 1426 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 FLT4P35916 1363 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 FBLN1P23142 703 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-212ENST00000601471 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
LINC00649-212ENST00000601471 INSRP06213 1382 aa13.21□□□□□ -0.29
LINC00649-212ENST00000601471 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.29
LINC00649-212ENST00000601471 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
LINC00649-212ENST00000601471 NCAPD2Q15021 1401 aa13.21□□□□□ -0.3
LINC00649-212ENST00000601471 A0A0G2JS52 829 aa13.2□□□□□ -0.3
LINC00649-212ENST00000601471 MYT1Q01538 1121 aa13.2□□□□□ -0.3
LINC00649-212ENST00000601471 RRS1Q15050 365 aaKnown RBP13.2□□□□□ -0.3
LINC00649-212ENST00000601471 SBF2Q86WG5 1849 aa13.2□□□□□ -0.3
LINC00649-212ENST00000601471 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
LINC00649-212ENST00000601471 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
LINC00649-212ENST00000601471 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
LINC00649-212ENST00000601471 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
LINC00649-212ENST00000601471 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
LINC00649-212ENST00000601471 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
LINC00649-212ENST00000601471 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
LINC00649-212ENST00000601471 AMPHP49418 695 aa13.17□□□□□ -0.3
LINC00649-212ENST00000601471 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
LINC00649-212ENST00000601471 PDE3BQ13370 1112 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 DDB1Q16531 1140 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 FAM182BQ5T319 152 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 FAM196AQ6ZSG2 479 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 POLKQ9UBT6 870 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 MEGF6O75095 1541 aa13.16□□□□□ -0.3
LINC00649-212ENST00000601471 NHSQ6T4R5 1651 aa13.15□□□□□ -0.3
LINC00649-212ENST00000601471 IL2RBP14784 551 aa13.15□□□□□ -0.3
LINC00649-212ENST00000601471 PKD1L3Q7Z443 1732 aa13.15□□□□□ -0.3
LINC00649-212ENST00000601471 RREB1Q92766 1687 aa13.15□□□□□ -0.31
LINC00649-212ENST00000601471 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-212ENST00000601471 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
LINC00649-212ENST00000601471 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
LINC00649-212ENST00000601471 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
LINC00649-212ENST00000601471 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
LINC00649-212ENST00000601471 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
LINC00649-212ENST00000601471 LTV1Q96GA3 475 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-212ENST00000601471 EXOC5O00471 708 aa13.11□□□□□ -0.31
LINC00649-212ENST00000601471 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
LINC00649-212ENST00000601471 TRIM37O94972 964 aa13.1□□□□□ -0.31
LINC00649-212ENST00000601471 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
LINC00649-212ENST00000601471 MORC1Q86VD1 984 aa13.1□□□□□ -0.31
LINC00649-212ENST00000601471 BAG6P46379 1132 aa13.09□□□□□ -0.31
LINC00649-212ENST00000601471 SF3B2Q13435 895 aaKnown RBP13.09□□□□□ -0.31
LINC00649-212ENST00000601471 IGSF1Q8N6C5 1336 aa13.09□□□□□ -0.31
LINC00649-212ENST00000601471 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
LINC00649-212ENST00000601471 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
LINC00649-212ENST00000601471 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
LINC00649-212ENST00000601471 COL3A1P02461 1466 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms