RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 KCNH5Q8NCM2 988 aa15.7■□□□□ 0.1
ZNF548-211ENST00000600927 UPF1Q92900 1129 aaKnown RBP eCLIP15.7■□□□□ 0.1
ZNF548-211ENST00000600927 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
ZNF548-211ENST00000600927 BRWD3Q6RI45 1802 aa15.7■□□□□ 0.1
ZNF548-211ENST00000600927 SPATA31A1Q5TZJ5 1347 aa15.69■□□□□ 0.1
ZNF548-211ENST00000600927 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
ZNF548-211ENST00000600927 RALBP1Q15311 655 aa15.68■□□□□ 0.1
ZNF548-211ENST00000600927 SEPT12Q8IYM1 358 aa15.67■□□□□ 0.1
ZNF548-211ENST00000600927 POLR3GLQ9BT43 218 aa15.67■□□□□ 0.1
ZNF548-211ENST00000600927 LTN1O94822 1766 aa15.66■□□□□ 0.1
ZNF548-211ENST00000600927 CRB1P82279 1406 aa15.66■□□□□ 0.1
ZNF548-211ENST00000600927 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
ZNF548-211ENST00000600927 AXIN2Q9Y2T1 843 aa15.65■□□□□ 0.1
ZNF548-211ENST00000600927 CCDC9Q9Y3X0 531 aaKnown RBP15.65■□□□□ 0.1
ZNF548-211ENST00000600927 KIF20BQ96Q89 1820 aa15.65■□□□□ 0.1
ZNF548-211ENST00000600927 NPC1L1Q9UHC9 1359 aa15.64■□□□□ 0.09
ZNF548-211ENST00000600927 WNK3Q9BYP7 1800 aa15.64■□□□□ 0.09
ZNF548-211ENST00000600927 FAM98CQ17RN3 349 aaKnown RBP15.64■□□□□ 0.09
ZNF548-211ENST00000600927 BARGINQ6ZT62 677 aa15.64■□□□□ 0.09
ZNF548-211ENST00000600927 CARD14Q9BXL6 1004 aa15.64■□□□□ 0.09
ZNF548-211ENST00000600927 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
ZNF548-211ENST00000600927 PARP4Q9UKK3 1724 aaKnown RBP15.64■□□□□ 0.09
ZNF548-211ENST00000600927 NSD3Q9BZ95 1437 aa15.63■□□□□ 0.09
ZNF548-211ENST00000600927 RGPD5Q99666 1765 aa15.63■□□□□ 0.09
ZNF548-211ENST00000600927 PANK3Q9H999 370 aa15.63■□□□□ 0.09
ZNF548-211ENST00000600927 WDR17Q8IZU2 1322 aa15.63■□□□□ 0.09
ZNF548-211ENST00000600927 FYB1O15117 783 aa15.62■□□□□ 0.09
ZNF548-211ENST00000600927 THRAP3Q9Y2W1 955 aaKnown RBP15.62■□□□□ 0.09
ZNF548-211ENST00000600927 SOX12O15370 315 aa15.61■□□□□ 0.09
ZNF548-211ENST00000600927 BLMP54132 1417 aaPredicted RBP15.6■□□□□ 0.09
ZNF548-211ENST00000600927 EVA1CP58658 441 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 KRT27Q7Z3Y8 459 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 TCP11L2Q8N4U5 519 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 COG3Q96JB2 828 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 ERBB3P21860 1342 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 LRRC37A3O60309 1634 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 DISP2A7MBM2 1401 aa15.6■□□□□ 0.09
ZNF548-211ENST00000600927 ANKRD26Q9UPS8 1709 aa15.58■□□□□ 0.08
ZNF548-211ENST00000600927 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
ZNF548-211ENST00000600927 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
ZNF548-211ENST00000600927 PARD3Q8TEW0 1356 aa15.58■□□□□ 0.08
ZNF548-211ENST00000600927 FAM208AQ9UK61 1670 aaKnown RBP15.57■□□□□ 0.08
ZNF548-211ENST00000600927 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
ZNF548-211ENST00000600927 MAP3K19Q56UN5 1328 aa15.57■□□□□ 0.08
ZNF548-211ENST00000600927 MYBBP1AQ9BQG0 1328 aaKnown RBP15.57■□□□□ 0.08
ZNF548-211ENST00000600927 CCDC125Q86Z20 511 aa15.56■□□□□ 0.08
ZNF548-211ENST00000600927 CARD10Q9BWT7 1032 aa15.56■□□□□ 0.08
ZNF548-211ENST00000600927 USP35Q9P2H5 1018 aa15.56■□□□□ 0.08
ZNF548-211ENST00000600927 PEAK1Q9H792 1746 aa15.56■□□□□ 0.08
ZNF548-211ENST00000600927 TOM1L2Q6ZVM7 507 aa15.55■□□□□ 0.08
ZNF548-211ENST00000600927 IP6K1Q92551 441 aa15.55■□□□□ 0.08
ZNF548-211ENST00000600927 TNS1Q9HBL0 1735 aaKnown RBP15.54■□□□□ 0.08
ZNF548-211ENST00000600927 KIF24Q5T7B8 1368 aa15.54■□□□□ 0.08
ZNF548-211ENST00000600927 CGNL1Q0VF96 1302 aa15.54■□□□□ 0.08
ZNF548-211ENST00000600927 A0A0G2JS52 829 aa15.54■□□□□ 0.08
ZNF548-211ENST00000600927 MYT1Q01538 1121 aa15.54■□□□□ 0.08
ZNF548-211ENST00000600927 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
ZNF548-211ENST00000600927 FBLN1P23142 703 aa15.53■□□□□ 0.08
ZNF548-211ENST00000600927 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
ZNF548-211ENST00000600927 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
ZNF548-211ENST00000600927 HOXC9P31274 260 aa15.52■□□□□ 0.08
ZNF548-211ENST00000600927 ANKRD24Q8TF21 1146 aa15.52■□□□□ 0.08
ZNF548-211ENST00000600927 NSD2O96028 1365 aa15.51■□□□□ 0.07
ZNF548-211ENST00000600927 YTHDC1Q96MU7 727 aaKnown RBP15.51■□□□□ 0.07
ZNF548-211ENST00000600927 CDCA7Q9BWT1 371 aaPredicted RBP15.51■□□□□ 0.07
ZNF548-211ENST00000600927 BCL9O00512 1426 aa15.51■□□□□ 0.07
ZNF548-211ENST00000600927 TNS2Q63HR2 1409 aa15.51■□□□□ 0.07
ZNF548-211ENST00000600927 INSRP06213 1382 aa15.5■□□□□ 0.07
ZNF548-211ENST00000600927 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
ZNF548-211ENST00000600927 RRS1Q15050 365 aaKnown RBP15.5■□□□□ 0.07
ZNF548-211ENST00000600927 FLT4P35916 1363 aa15.49■□□□□ 0.07
ZNF548-211ENST00000600927 FAM182BQ5T319 152 aa15.49■□□□□ 0.07
ZNF548-211ENST00000600927 OVOS2A0A0G2JMS6 1433 aa15.49■□□□□ 0.07
ZNF548-211ENST00000600927 SMG6Q86US8 1419 aaKnown RBP15.49■□□□□ 0.07
ZNF548-211ENST00000600927 FAM196AQ6ZSG2 479 aa15.48■□□□□ 0.07
ZNF548-211ENST00000600927 NCAPD2Q15021 1401 aa15.48■□□□□ 0.07
ZNF548-211ENST00000600927 AMPHP49418 695 aa15.47■□□□□ 0.07
ZNF548-211ENST00000600927 PDE3BQ13370 1112 aa15.47■□□□□ 0.07
ZNF548-211ENST00000600927 DDB1Q16531 1140 aa15.47■□□□□ 0.07
ZNF548-211ENST00000600927 PNISRQ8TF01 805 aaKnown RBP15.47■□□□□ 0.07
ZNF548-211ENST00000600927 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
ZNF548-211ENST00000600927 NLRP2Q9NX02 1062 aa15.46■□□□□ 0.07
ZNF548-211ENST00000600927 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
ZNF548-211ENST00000600927 CCDC184Q52MB2 194 aa15.45■□□□□ 0.06
ZNF548-211ENST00000600927 SBF2Q86WG5 1849 aa15.45■□□□□ 0.06
ZNF548-211ENST00000600927 SHANK3Q9BYB0 1731 aa15.44■□□□□ 0.06
ZNF548-211ENST00000600927 IL2RBP14784 551 aa15.44■□□□□ 0.06
ZNF548-211ENST00000600927 HSP90AB2PQ58FF8 381 aa15.44■□□□□ 0.06
ZNF548-211ENST00000600927 CC2D1BQ5T0F9 858 aaKnown RBP15.44■□□□□ 0.06
ZNF548-211ENST00000600927 DEFB132Q7Z7B7 95 aa15.44■□□□□ 0.06
ZNF548-211ENST00000600927 MARCH10Q8NA82 808 aaPredicted RBP15.44■□□□□ 0.06
ZNF548-211ENST00000600927 MEGF6O75095 1541 aa15.43■□□□□ 0.06
ZNF548-211ENST00000600927 MAP2P11137 1827 aaKnown RBP15.43■□□□□ 0.06
ZNF548-211ENST00000600927 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
ZNF548-211ENST00000600927 RGPD3A6NKT7 1758 aaPredicted RBP15.43■□□□□ 0.06
ZNF548-211ENST00000600927 RGPD4Q7Z3J3 1758 aa15.43■□□□□ 0.06
ZNF548-211ENST00000600927 RREB1Q92766 1687 aa15.42■□□□□ 0.06
ZNF548-211ENST00000600927 LTV1Q96GA3 475 aaPredicted RBP15.42■□□□□ 0.06
ZNF548-211ENST00000600927 PPP2R1AP30153 589 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms