RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 LARP1Q6PKG0 1096 aaKnown RBP21.93■■□□□ 1.1
RPS28-203ENST00000600659 STRN4Q9NRL3 753 aa21.93■■□□□ 1.1
RPS28-203ENST00000600659 CCDC9Q9Y3X0 531 aaKnown RBP21.93■■□□□ 1.1
RPS28-203ENST00000600659 FYB1O15117 783 aa21.92■■□□□ 1.1
RPS28-203ENST00000600659 SEPT12Q8IYM1 358 aa21.91■■□□□ 1.1
RPS28-203ENST00000600659 ANKRD26Q9UPS8 1709 aa21.91■■□□□ 1.1
RPS28-203ENST00000600659 FAM98CQ17RN3 349 aaKnown RBP21.9■■□□□ 1.1
RPS28-203ENST00000600659 UPF1Q92900 1129 aaKnown RBP eCLIP21.9■■□□□ 1.1
RPS28-203ENST00000600659 CRB1P82279 1406 aa21.89■■□□□ 1.1
RPS28-203ENST00000600659 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.1
RPS28-203ENST00000600659 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.1
RPS28-203ENST00000600659 GGNBP2Q9H3C7 697 aa21.88■■□□□ 1.09
RPS28-203ENST00000600659 KIF7Q2M1P5 1343 aa21.87■■□□□ 1.09
RPS28-203ENST00000600659 PEAK1Q9H792 1746 aa21.87■■□□□ 1.09
RPS28-203ENST00000600659 FBLN1P23142 703 aa21.86■■□□□ 1.09
RPS28-203ENST00000600659 COG3Q96JB2 828 aa21.86■■□□□ 1.09
RPS28-203ENST00000600659 POLR3GLQ9BT43 218 aa21.86■■□□□ 1.09
RPS28-203ENST00000600659 WDR17Q8IZU2 1322 aa21.86■■□□□ 1.09
RPS28-203ENST00000600659 EVA1CP58658 441 aa21.85■■□□□ 1.09
RPS28-203ENST00000600659 LRRC37A3O60309 1634 aa21.85■■□□□ 1.09
RPS28-203ENST00000600659 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
RPS28-203ENST00000600659 MAP3K19Q56UN5 1328 aa21.83■■□□□ 1.09
RPS28-203ENST00000600659 FAM208AQ9UK61 1670 aaKnown RBP21.83■■□□□ 1.08
RPS28-203ENST00000600659 BLMP54132 1417 aaPredicted RBP21.83■■□□□ 1.08
RPS28-203ENST00000600659 ERBB3P21860 1342 aa21.82■■□□□ 1.08
RPS28-203ENST00000600659 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
RPS28-203ENST00000600659 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
RPS28-203ENST00000600659 RGPD2P0DJD1 1756 aa21.82■■□□□ 1.08
RPS28-203ENST00000600659 DISP2A7MBM2 1401 aa21.82■■□□□ 1.08
RPS28-203ENST00000600659 KRT27Q7Z3Y8 459 aa21.8■■□□□ 1.08
RPS28-203ENST00000600659 PANK3Q9H999 370 aa21.8■■□□□ 1.08
RPS28-203ENST00000600659 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
RPS28-203ENST00000600659 THRAP3Q9Y2W1 955 aaKnown RBP21.8■■□□□ 1.08
RPS28-203ENST00000600659 CCDC7Q96M83 1385 aa21.79■■□□□ 1.08
RPS28-203ENST00000600659 IP6K1Q92551 441 aa21.79■■□□□ 1.08
RPS28-203ENST00000600659 RTL1A6NKG5 1358 aa21.78■■□□□ 1.08
RPS28-203ENST00000600659 CGNL1Q0VF96 1302 aa21.78■■□□□ 1.08
RPS28-203ENST00000600659 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
RPS28-203ENST00000600659 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
RPS28-203ENST00000600659 TOM1L2Q6ZVM7 507 aa21.78■■□□□ 1.08
RPS28-203ENST00000600659 HOXC9P31274 260 aa21.77■■□□□ 1.07
RPS28-203ENST00000600659 CARD10Q9BWT7 1032 aa21.77■■□□□ 1.07
RPS28-203ENST00000600659 TNS1Q9HBL0 1735 aaKnown RBP21.76■■□□□ 1.07
RPS28-203ENST00000600659 A0A0G2JS52 829 aa21.76■■□□□ 1.07
RPS28-203ENST00000600659 MYT1Q01538 1121 aa21.76■■□□□ 1.07
RPS28-203ENST00000600659 ANKRD24Q8TF21 1146 aa21.75■■□□□ 1.07
RPS28-203ENST00000600659 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
RPS28-203ENST00000600659 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
RPS28-203ENST00000600659 CSB-PGBD3P0DP91 1061 aa21.73■■□□□ 1.07
RPS28-203ENST00000600659 KIF24Q5T7B8 1368 aa21.73■■□□□ 1.07
RPS28-203ENST00000600659 SBF2Q86WG5 1849 aa21.72■■□□□ 1.07
RPS28-203ENST00000600659 NSD2O96028 1365 aa21.72■■□□□ 1.07
RPS28-203ENST00000600659 FLT4P35916 1363 aa21.71■■□□□ 1.07
RPS28-203ENST00000600659 PER1O15534 1290 aaPredicted RBP21.71■■□□□ 1.07
RPS28-203ENST00000600659 EMILIN1Q9Y6C2 1016 aa21.71■■□□□ 1.07
RPS28-203ENST00000600659 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
RPS28-203ENST00000600659 SHANK3Q9BYB0 1731 aa21.69■■□□□ 1.06
RPS28-203ENST00000600659 INSRP06213 1382 aa21.69■■□□□ 1.06
RPS28-203ENST00000600659 AMPHP49418 695 aa21.69■■□□□ 1.06
RPS28-203ENST00000600659 TNS2Q63HR2 1409 aa21.69■■□□□ 1.06
RPS28-203ENST00000600659 SMG6Q86US8 1419 aaKnown RBP21.69■■□□□ 1.06
RPS28-203ENST00000600659 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
RPS28-203ENST00000600659 LTV1Q96GA3 475 aaPredicted RBP21.67■■□□□ 1.06
RPS28-203ENST00000600659 NLRP2Q9NX02 1062 aa21.67■■□□□ 1.06
RPS28-203ENST00000600659 CCDC125Q86Z20 511 aa21.66■■□□□ 1.06
RPS28-203ENST00000600659 CDCA7Q9BWT1 371 aaPredicted RBP21.66■■□□□ 1.06
RPS28-203ENST00000600659 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
RPS28-203ENST00000600659 NCAPD2Q15021 1401 aa21.65■■□□□ 1.06
RPS28-203ENST00000600659 MEGF6O75095 1541 aa21.64■■□□□ 1.05
RPS28-203ENST00000600659 DDB1Q16531 1140 aa21.64■■□□□ 1.05
RPS28-203ENST00000600659 OVOS2A0A0G2JMS6 1433 aa21.64■■□□□ 1.05
RPS28-203ENST00000600659 PDE3BQ13370 1112 aa21.63■■□□□ 1.05
RPS28-203ENST00000600659 KNSTRNQ9Y448 316 aa21.63■■□□□ 1.05
RPS28-203ENST00000600659 BCL9O00512 1426 aa21.63■■□□□ 1.05
RPS28-203ENST00000600659 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
RPS28-203ENST00000600659 MARCH10Q8NA82 808 aaPredicted RBP21.62■■□□□ 1.05
RPS28-203ENST00000600659 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
RPS28-203ENST00000600659 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
RPS28-203ENST00000600659 IL2RBP14784 551 aa21.6■■□□□ 1.05
RPS28-203ENST00000600659 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
RPS28-203ENST00000600659 DEFB132Q7Z7B7 95 aa21.6■■□□□ 1.05
RPS28-203ENST00000600659 NPC1L1Q9UHC9 1359 aa21.59■■□□□ 1.05
RPS28-203ENST00000600659 MORC1Q86VD1 984 aa21.57■■□□□ 1.04
RPS28-203ENST00000600659 USHBP1Q8N6Y0 703 aa21.57■■□□□ 1.04
RPS28-203ENST00000600659 PKD1L3Q7Z443 1732 aa21.57■■□□□ 1.04
RPS28-203ENST00000600659 NHSQ6T4R5 1651 aa21.57■■□□□ 1.04
RPS28-203ENST00000600659 RREB1Q92766 1687 aa21.57■■□□□ 1.04
RPS28-203ENST00000600659 TRIM37O94972 964 aa21.56■■□□□ 1.04
RPS28-203ENST00000600659 EXOC5O00471 708 aa21.55■■□□□ 1.04
RPS28-203ENST00000600659 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
RPS28-203ENST00000600659 RGPD3A6NKT7 1758 aaPredicted RBP21.55■■□□□ 1.04
RPS28-203ENST00000600659 RGPD4Q7Z3J3 1758 aa21.55■■□□□ 1.04
RPS28-203ENST00000600659 EIF4A2Q14240 407 aaKnown RBP21.54■■□□□ 1.04
RPS28-203ENST00000600659 PTF1AQ7RTS3 328 aa21.54■■□□□ 1.04
RPS28-203ENST00000600659 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.04
RPS28-203ENST00000600659 DOT1LQ8TEK3 1739 aa21.52■■□□□ 1.04
RPS28-203ENST00000600659 SF3B2Q13435 895 aaKnown RBP21.52■■□□□ 1.03
RPS28-203ENST00000600659 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.03
RPS28-203ENST00000600659 EYA1Q99502 592 aa21.52■■□□□ 1.03
RPS28-203ENST00000600659 BTAF1O14981 1849 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms