RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 CARD14Q9BXL6 1004 aa10.53□□□□□ -0.72
FKRP-220ENST00000600646 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
FKRP-220ENST00000600646 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
FKRP-220ENST00000600646 ABCC6O95255 1503 aa10.53□□□□□ -0.72
FKRP-220ENST00000600646 NSD2O96028 1365 aa10.52□□□□□ -0.72
FKRP-220ENST00000600646 NRAPQ86VF7 1730 aa10.52□□□□□ -0.73
FKRP-220ENST00000600646 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
FKRP-220ENST00000600646 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
FKRP-220ENST00000600646 CCDC7Q96M83 1385 aa10.52□□□□□ -0.73
FKRP-220ENST00000600646 USP35Q9P2H5 1018 aa10.51□□□□□ -0.73
FKRP-220ENST00000600646 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 CAMTA1Q9Y6Y1 1673 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 BLMP54132 1417 aaPredicted RBP10.5□□□□□ -0.73
FKRP-220ENST00000600646 CRB1P82279 1406 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 SMG6Q86US8 1419 aaKnown RBP10.5□□□□□ -0.73
FKRP-220ENST00000600646 COL5A2P05997 1499 aaPredicted RBP10.5□□□□□ -0.73
FKRP-220ENST00000600646 LTN1O94822 1766 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 NFAT5O94916 1531 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 FAM98CQ17RN3 349 aaKnown RBP10.5□□□□□ -0.73
FKRP-220ENST00000600646 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
FKRP-220ENST00000600646 MORC1Q86VD1 984 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 TCP11L2Q8N4U5 519 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 IP6K1Q92551 441 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 CDCA7Q9BWT1 371 aaPredicted RBP10.5□□□□□ -0.73
FKRP-220ENST00000600646 SPATA31A1Q5TZJ5 1347 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 WASHC2AQ641Q2 1341 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 WDR17Q8IZU2 1322 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 KIF24Q5T7B8 1368 aa10.5□□□□□ -0.73
FKRP-220ENST00000600646 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
FKRP-220ENST00000600646 BARGINQ6ZT62 677 aa10.49□□□□□ -0.73
FKRP-220ENST00000600646 SEPT12Q8IYM1 358 aa10.49□□□□□ -0.73
FKRP-220ENST00000600646 RTL1A6NKG5 1358 aa10.49□□□□□ -0.73
FKRP-220ENST00000600646 RGS12O14924 1447 aa10.49□□□□□ -0.73
FKRP-220ENST00000600646 GLI3P10071 1580 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
FKRP-220ENST00000600646 PDE3BQ13370 1112 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 ANKRD24Q8TF21 1146 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 CARD10Q9BWT7 1032 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 MAP3K19Q56UN5 1328 aa10.48□□□□□ -0.73
FKRP-220ENST00000600646 HOXC9P31274 260 aa10.47□□□□□ -0.73
FKRP-220ENST00000600646 RRS1Q15050 365 aaKnown RBP10.47□□□□□ -0.73
FKRP-220ENST00000600646 KRT27Q7Z3Y8 459 aa10.47□□□□□ -0.73
FKRP-220ENST00000600646 ERBB3P21860 1342 aa10.47□□□□□ -0.73
FKRP-220ENST00000600646 FLT4P35916 1363 aa10.47□□□□□ -0.73
FKRP-220ENST00000600646 ANKRD26Q9UPS8 1709 aa10.47□□□□□ -0.73
FKRP-220ENST00000600646 COL18A1P39060 1754 aa10.47□□□□□ -0.73
FKRP-220ENST00000600646 TNNT2P45379 298 aaPredicted RBP10.46□□□□□ -0.73
FKRP-220ENST00000600646 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.73
FKRP-220ENST00000600646 LTV1Q96GA3 475 aaPredicted RBP10.46□□□□□ -0.73
FKRP-220ENST00000600646 RGPD5Q99666 1765 aa10.45□□□□□ -0.74
FKRP-220ENST00000600646 FAM208AQ9UK61 1670 aaKnown RBP10.45□□□□□ -0.74
FKRP-220ENST00000600646 DDB1Q16531 1140 aa10.45□□□□□ -0.74
FKRP-220ENST00000600646 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
FKRP-220ENST00000600646 INSRP06213 1382 aa10.44□□□□□ -0.74
FKRP-220ENST00000600646 EXOC5O00471 708 aa10.44□□□□□ -0.74
FKRP-220ENST00000600646 PER1O15534 1290 aaPredicted RBP10.44□□□□□ -0.74
FKRP-220ENST00000600646 FBLN1P23142 703 aa10.44□□□□□ -0.74
FKRP-220ENST00000600646 CC2D1BQ5T0F9 858 aaKnown RBP10.44□□□□□ -0.74
FKRP-220ENST00000600646 NPC1L1Q9UHC9 1359 aa10.43□□□□□ -0.74
FKRP-220ENST00000600646 IL2RBP14784 551 aa10.43□□□□□ -0.74
FKRP-220ENST00000600646 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
FKRP-220ENST00000600646 FAM196AQ6ZSG2 479 aa10.42□□□□□ -0.74
FKRP-220ENST00000600646 POLKQ9UBT6 870 aa10.42□□□□□ -0.74
FKRP-220ENST00000600646 EMILIN1Q9Y6C2 1016 aa10.42□□□□□ -0.74
FKRP-220ENST00000600646 MAP2P11137 1827 aaKnown RBP10.42□□□□□ -0.74
FKRP-220ENST00000600646 THSD7AQ9UPZ6 1657 aa10.41□□□□□ -0.74
FKRP-220ENST00000600646 CNGB1Q14028 1251 aaPredicted RBP10.41□□□□□ -0.74
FKRP-220ENST00000600646 HSP90AB2PQ58FF8 381 aa10.41□□□□□ -0.74
FKRP-220ENST00000600646 RAPGEF4Q8WZA2 1011 aa10.41□□□□□ -0.74
FKRP-220ENST00000600646 TATP17735 454 aaPredicted RBP10.4□□□□□ -0.74
FKRP-220ENST00000600646 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.742e-7■■■■■ 31.4
FKRP-220ENST00000600646 CFAP53Q96M91 514 aa10.4□□□□□ -0.74
FKRP-220ENST00000600646 PARP4Q9UKK3 1724 aaKnown RBP10.4□□□□□ -0.74
FKRP-220ENST00000600646 BRWD3Q6RI45 1802 aa10.4□□□□□ -0.75
FKRP-220ENST00000600646 MTHFSP49914 203 aa10.38□□□□□ -0.75
FKRP-220ENST00000600646 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
FKRP-220ENST00000600646 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
FKRP-220ENST00000600646 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
FKRP-220ENST00000600646 OVOS2A0A0G2JMS6 1433 aa10.38□□□□□ -0.75
FKRP-220ENST00000600646 WNK3Q9BYP7 1800 aa10.37□□□□□ -0.75
FKRP-220ENST00000600646 ZNF316A6NFI3 1004 aaPredicted RBP10.37□□□□□ -0.75
FKRP-220ENST00000600646 BAG6P46379 1132 aa10.37□□□□□ -0.75
FKRP-220ENST00000600646 ZCRB1Q8TBF4 217 aaKnown RBP10.37□□□□□ -0.75
FKRP-220ENST00000600646 PEAK1Q9H792 1746 aa10.37□□□□□ -0.75
FKRP-220ENST00000600646 DISP2A7MBM2 1401 aa10.36□□□□□ -0.75
FKRP-220ENST00000600646 TNS2Q63HR2 1409 aa10.36□□□□□ -0.75
FKRP-220ENST00000600646 DIAPH1O60610 1272 aaKnown RBP10.36□□□□□ -0.75
FKRP-220ENST00000600646 EIF4A2Q14240 407 aaKnown RBP10.36□□□□□ -0.75
FKRP-220ENST00000600646 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
FKRP-220ENST00000600646 LRRC37A3O60309 1634 aa10.36□□□□□ -0.75
FKRP-220ENST00000600646 RALBP1Q15311 655 aa10.35□□□□□ -0.75
FKRP-220ENST00000600646 FAM182BQ5T319 152 aa10.35□□□□□ -0.75
FKRP-220ENST00000600646 USHBP1Q8N6Y0 703 aa10.35□□□□□ -0.75
FKRP-220ENST00000600646 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
FKRP-220ENST00000600646 NUDCQ9Y266 331 aa10.35□□□□□ -0.75
FKRP-220ENST00000600646 RGPD1P0DJD0 1748 aa10.34□□□□□ -0.75
FKRP-220ENST00000600646 TRIM37O94972 964 aa10.34□□□□□ -0.75
FKRP-220ENST00000600646 EYA1Q99502 592 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms