RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 CHRNA2Q15822 529 aa28.25■■■□□ 2.11
GTPBP3-221ENST00000600610 RGS12O14924 1447 aa28.25■■■□□ 2.11
GTPBP3-221ENST00000600610 KIF24Q5T7B8 1368 aa28.24■■■□□ 2.11
GTPBP3-221ENST00000600610 COL18A1P39060 1754 aa28.24■■■□□ 2.11
GTPBP3-221ENST00000600610 GLI3P10071 1580 aa28.24■■■□□ 2.11
GTPBP3-221ENST00000600610 LMO7Q8WWI1 1683 aa28.23■■■□□ 2.11
GTPBP3-221ENST00000600610 DDX10Q13206 875 aaKnown RBP28.21■■■□□ 2.11
GTPBP3-221ENST00000600610 CCDC9Q9Y3X0 531 aaKnown RBP28.21■■■□□ 2.11
GTPBP3-221ENST00000600610 MORC1Q86VD1 984 aa28.2■■■□□ 2.1
GTPBP3-221ENST00000600610 ONECUT3O60422 494 aaPredicted RBP28.19■■■□□ 2.1
GTPBP3-221ENST00000600610 CAMTA1Q9Y6Y1 1673 aa28.19■■■□□ 2.1
GTPBP3-221ENST00000600610 RTL1A6NKG5 1358 aa28.18■■■□□ 2.1
GTPBP3-221ENST00000600610 EVA1CP58658 441 aa28.17■■■□□ 2.1
GTPBP3-221ENST00000600610 SPATA31A5Q5VU36 1347 aa28.17■■■□□ 2.1
GTPBP3-221ENST00000600610 SPATA31A7Q8IWB4 1347 aa28.17■■■□□ 2.1
GTPBP3-221ENST00000600610 RGPD5Q99666 1765 aa28.16■■■□□ 2.1
GTPBP3-221ENST00000600610 SOX12O15370 315 aa28.15■■■□□ 2.1
GTPBP3-221ENST00000600610 BLMP54132 1417 aaPredicted RBP28.15■■■□□ 2.1
GTPBP3-221ENST00000600610 IP6K1Q92551 441 aa28.14■■■□□ 2.1
GTPBP3-221ENST00000600610 STRN4Q9NRL3 753 aa28.14■■■□□ 2.1
GTPBP3-221ENST00000600610 MAP3K19Q56UN5 1328 aa28.13■■■□□ 2.09
GTPBP3-221ENST00000600610 SPATA31A1Q5TZJ5 1347 aa28.12■■■□□ 2.09
GTPBP3-221ENST00000600610 COL5A2P05997 1499 aaPredicted RBP28.11■■■□□ 2.09
GTPBP3-221ENST00000600610 ZBTB7CA1YPR0 619 aa28.11■■■□□ 2.09
GTPBP3-221ENST00000600610 AMPHP49418 695 aa28.11■■■□□ 2.09
GTPBP3-221ENST00000600610 CC2D1BQ5T0F9 858 aaKnown RBP28.11■■■□□ 2.09
GTPBP3-221ENST00000600610 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
GTPBP3-221ENST00000600610 SEPT12Q8IYM1 358 aa28.1■■■□□ 2.09
GTPBP3-221ENST00000600610 FLT4P35916 1363 aa28.1■■■□□ 2.09
GTPBP3-221ENST00000600610 SMG6Q86US8 1419 aaKnown RBP28.09■■■□□ 2.09
GTPBP3-221ENST00000600610 HOXC9P31274 260 aa28.08■■■□□ 2.09
GTPBP3-221ENST00000600610 POLKQ9UBT6 870 aa28.08■■■□□ 2.09
GTPBP3-221ENST00000600610 BRWD3Q6RI45 1802 aa28.07■■■□□ 2.08
GTPBP3-221ENST00000600610 FAM98CQ17RN3 349 aaKnown RBP28.07■■■□□ 2.08
GTPBP3-221ENST00000600610 LARP1Q6PKG0 1096 aaKnown RBP28.07■■■□□ 2.08
GTPBP3-221ENST00000600610 AXIN2Q9Y2T1 843 aa28.07■■■□□ 2.08
GTPBP3-221ENST00000600610 RRS1Q15050 365 aaKnown RBP28.06■■■□□ 2.08
GTPBP3-221ENST00000600610 THRAP3Q9Y2W1 955 aaKnown RBP28.06■■■□□ 2.08
GTPBP3-221ENST00000600610 INSRP06213 1382 aa28.06■■■□□ 2.08
GTPBP3-221ENST00000600610 RALBP1Q15311 655 aa28.05■■■□□ 2.08
GTPBP3-221ENST00000600610 BARGINQ6ZT62 677 aa28.05■■■□□ 2.08
GTPBP3-221ENST00000600610 UPF1Q92900 1129 aaKnown RBP eCLIP28.05■■■□□ 2.08
GTPBP3-221ENST00000600610 PEAK1Q9H792 1746 aa28.04■■■□□ 2.08
GTPBP3-221ENST00000600610 CRB1P82279 1406 aa28.04■■■□□ 2.08
GTPBP3-221ENST00000600610 WDR17Q8IZU2 1322 aa28.04■■■□□ 2.08
GTPBP3-221ENST00000600610 FBLN1P23142 703 aa28.04■■■□□ 2.08
GTPBP3-221ENST00000600610 PARD3Q8TEW0 1356 aa28.03■■■□□ 2.08
GTPBP3-221ENST00000600610 TCP11L2Q8N4U5 519 aa28.03■■■□□ 2.08
GTPBP3-221ENST00000600610 ERBB3P21860 1342 aa28.02■■■□□ 2.08
GTPBP3-221ENST00000600610 TNNT2P45379 298 aaPredicted RBP28.02■■■□□ 2.08
GTPBP3-221ENST00000600610 THSD7AQ9UPZ6 1657 aa28.02■■■□□ 2.08
GTPBP3-221ENST00000600610 EMILIN1Q9Y6C2 1016 aa28.01■■■□□ 2.07
GTPBP3-221ENST00000600610 A0A0G2JS52 829 aa28■■■□□ 2.07
GTPBP3-221ENST00000600610 MYT1Q01538 1121 aa28■■■□□ 2.07
GTPBP3-221ENST00000600610 KRT27Q7Z3Y8 459 aa28■■■□□ 2.07
GTPBP3-221ENST00000600610 USP35Q9P2H5 1018 aa28■■■□□ 2.07
GTPBP3-221ENST00000600610 TOM1L2Q6ZVM7 507 aa27.99■■■□□ 2.07
GTPBP3-221ENST00000600610 ANKRD24Q8TF21 1146 aa27.99■■■□□ 2.07
GTPBP3-221ENST00000600610 CARD10Q9BWT7 1032 aa27.97■■■□□ 2.07
GTPBP3-221ENST00000600610 PPM1GO15355 546 aaPredicted RBP27.96■■■□□ 2.07
GTPBP3-221ENST00000600610 CSB-PGBD3P0DP91 1061 aa27.96■■■□□ 2.07
GTPBP3-221ENST00000600610 HSP90AB2PQ58FF8 381 aa27.96■■■□□ 2.07
GTPBP3-221ENST00000600610 MTHFSP49914 203 aa27.95■■■□□ 2.06
GTPBP3-221ENST00000600610 CCDC125Q86Z20 511 aa27.95■■■□□ 2.06
GTPBP3-221ENST00000600610 PPP2R1AP30153 589 aa27.94■■■□□ 2.06
GTPBP3-221ENST00000600610 CDCA7Q9BWT1 371 aaPredicted RBP27.93■■■□□ 2.06
GTPBP3-221ENST00000600610 RGPD2P0DJD1 1756 aa27.91■■■□□ 2.06
GTPBP3-221ENST00000600610 WNK3Q9BYP7 1800 aa27.9■■■□□ 2.06
GTPBP3-221ENST00000600610 PARP4Q9UKK3 1724 aaKnown RBP27.9■■■□□ 2.06
GTPBP3-221ENST00000600610 CFAP53Q96M91 514 aa27.9■■■□□ 2.06
GTPBP3-221ENST00000600610 PRKRIP1Q9H875 184 aaPredicted RBP27.9■■■□□ 2.06
GTPBP3-221ENST00000600610 NLRP2Q9NX02 1062 aa27.89■■■□□ 2.06
GTPBP3-221ENST00000600610 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
GTPBP3-221ENST00000600610 MYBBP1AQ9BQG0 1328 aaKnown RBP27.88■■■□□ 2.05
GTPBP3-221ENST00000600610 PDE3BQ13370 1112 aa27.87■■■□□ 2.05
GTPBP3-221ENST00000600610 LTV1Q96GA3 475 aaPredicted RBP27.87■■■□□ 2.05
GTPBP3-221ENST00000600610 EP400Q96L91 3159 aa27.85■■■□□ 2.05
GTPBP3-221ENST00000600610 EIF4A2Q14240 407 aaKnown RBP27.85■■■□□ 2.05
GTPBP3-221ENST00000600610 PLEKHG2Q9H7P9 1386 aa27.85■■■□□ 2.05
GTPBP3-221ENST00000600610 NCAPD2Q15021 1401 aa27.84■■■□□ 2.05
GTPBP3-221ENST00000600610 ANP32CO43423 234 aa27.84■■■□□ 2.05
GTPBP3-221ENST00000600610 DIAPH1O60610 1272 aaKnown RBP27.83■■■□□ 2.05
GTPBP3-221ENST00000600610 NBPF6Q5VWK0 638 aa27.83■■■□□ 2.05
GTPBP3-221ENST00000600610 NBPF4Q96M43 638 aa27.83■■■□□ 2.05
GTPBP3-221ENST00000600610 RGPD1P0DJD0 1748 aa27.82■■■□□ 2.04
GTPBP3-221ENST00000600610 IL13P35225 146 aa27.82■■■□□ 2.04
GTPBP3-221ENST00000600610 FAM196AQ6ZSG2 479 aa27.82■■■□□ 2.04
GTPBP3-221ENST00000600610 DDB1Q16531 1140 aa27.81■■■□□ 2.04
GTPBP3-221ENST00000600610 DISP2A7MBM2 1401 aa27.81■■■□□ 2.04
GTPBP3-221ENST00000600610 COL3A1P02461 1466 aaPredicted RBP27.81■■■□□ 2.04
GTPBP3-221ENST00000600610 IGSF1Q8N6C5 1336 aa27.8■■■□□ 2.04
GTPBP3-221ENST00000600610 LRRC37A3O60309 1634 aa27.79■■■□□ 2.04
GTPBP3-221ENST00000600610 IL2RBP14784 551 aa27.79■■■□□ 2.04
GTPBP3-221ENST00000600610 EYA1Q99502 592 aa27.79■■■□□ 2.04
GTPBP3-221ENST00000600610 NUDCQ9Y266 331 aa27.79■■■□□ 2.04
GTPBP3-221ENST00000600610 SF3B2Q13435 895 aaKnown RBP27.78■■■□□ 2.04
GTPBP3-221ENST00000600610 FAM182BQ5T319 152 aa27.77■■■□□ 2.04
GTPBP3-221ENST00000600610 EXOC5O00471 708 aa27.76■■■□□ 2.03
GTPBP3-221ENST00000600610 RAPGEF4Q8WZA2 1011 aa27.75■■■□□ 2.03
GTPBP3-221ENST00000600610 KDRP35968 1356 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms