RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 USP54Q70EL1 1684 aa18.71■□□□□ 0.59
ARHGEF1-222ENST00000600517 FYB1O15117 783 aa18.71■□□□□ 0.59
ARHGEF1-222ENST00000600517 COG3Q96JB2 828 aa18.71■□□□□ 0.59
ARHGEF1-222ENST00000600517 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
ARHGEF1-222ENST00000600517 THRAP3Q9Y2W1 955 aaKnown RBP18.71■□□□□ 0.59
ARHGEF1-222ENST00000600517 CCDC125Q86Z20 511 aa18.7■□□□□ 0.58
ARHGEF1-222ENST00000600517 COL18A1P39060 1754 aa18.7■□□□□ 0.58
ARHGEF1-222ENST00000600517 CRB1P82279 1406 aa18.69■□□□□ 0.58
ARHGEF1-222ENST00000600517 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
ARHGEF1-222ENST00000600517 TOM1L2Q6ZVM7 507 aa18.68■□□□□ 0.58
ARHGEF1-222ENST00000600517 C11orf95C9JLR9 678 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF1-222ENST00000600517 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
ARHGEF1-222ENST00000600517 ABCC6O95255 1503 aa18.66■□□□□ 0.58
ARHGEF1-222ENST00000600517 BRWD3Q6RI45 1802 aa18.66■□□□□ 0.58
ARHGEF1-222ENST00000600517 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
ARHGEF1-222ENST00000600517 THSD7AQ9UPZ6 1657 aa18.66■□□□□ 0.58
ARHGEF1-222ENST00000600517 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
ARHGEF1-222ENST00000600517 CSB-PGBD3P0DP91 1061 aa18.64■□□□□ 0.57
ARHGEF1-222ENST00000600517 IP6K1Q92551 441 aa18.64■□□□□ 0.57
ARHGEF1-222ENST00000600517 MYOM1P52179 1685 aa18.63■□□□□ 0.57
ARHGEF1-222ENST00000600517 FBLN1P23142 703 aa18.63■□□□□ 0.57
ARHGEF1-222ENST00000600517 MAP3K19Q56UN5 1328 aa18.63■□□□□ 0.57
ARHGEF1-222ENST00000600517 EP400Q96L91 3159 aa18.63■□□□□ 0.57
ARHGEF1-222ENST00000600517 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
ARHGEF1-222ENST00000600517 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
ARHGEF1-222ENST00000600517 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
ARHGEF1-222ENST00000600517 ERBB3P21860 1342 aa18.62■□□□□ 0.57
ARHGEF1-222ENST00000600517 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF1-222ENST00000600517 ANKRD24Q8TF21 1146 aa18.61■□□□□ 0.57
ARHGEF1-222ENST00000600517 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF1-222ENST00000600517 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
ARHGEF1-222ENST00000600517 PANK3Q9H999 370 aa18.6■□□□□ 0.57
ARHGEF1-222ENST00000600517 CCDC7Q96M83 1385 aa18.59■□□□□ 0.57
ARHGEF1-222ENST00000600517 AMPHP49418 695 aa18.59■□□□□ 0.57
ARHGEF1-222ENST00000600517 FAM196AQ6ZSG2 479 aa18.59■□□□□ 0.57
ARHGEF1-222ENST00000600517 HOXC9P31274 260 aa18.58■□□□□ 0.56
ARHGEF1-222ENST00000600517 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.56
ARHGEF1-222ENST00000600517 NLRP2Q9NX02 1062 aa18.58■□□□□ 0.56
ARHGEF1-222ENST00000600517 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
ARHGEF1-222ENST00000600517 DDB1Q16531 1140 aa18.57■□□□□ 0.56
ARHGEF1-222ENST00000600517 RGPD5Q99666 1765 aa18.57■□□□□ 0.56
ARHGEF1-222ENST00000600517 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
ARHGEF1-222ENST00000600517 LTN1O94822 1766 aa18.56■□□□□ 0.56
ARHGEF1-222ENST00000600517 DISP2A7MBM2 1401 aa18.55■□□□□ 0.56
ARHGEF1-222ENST00000600517 RTL1A6NKG5 1358 aa18.55■□□□□ 0.56
ARHGEF1-222ENST00000600517 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
ARHGEF1-222ENST00000600517 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF1-222ENST00000600517 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
ARHGEF1-222ENST00000600517 EXOC5O00471 708 aa18.53■□□□□ 0.56
ARHGEF1-222ENST00000600517 PARP4Q9UKK3 1724 aaKnown RBP18.53■□□□□ 0.56
ARHGEF1-222ENST00000600517 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF1-222ENST00000600517 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
ARHGEF1-222ENST00000600517 TRIM37O94972 964 aa18.51■□□□□ 0.55
ARHGEF1-222ENST00000600517 IL2RBP14784 551 aa18.51■□□□□ 0.55
ARHGEF1-222ENST00000600517 BAG6P46379 1132 aa18.51■□□□□ 0.55
ARHGEF1-222ENST00000600517 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
ARHGEF1-222ENST00000600517 INSRP06213 1382 aa18.51■□□□□ 0.55
ARHGEF1-222ENST00000600517 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
ARHGEF1-222ENST00000600517 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
ARHGEF1-222ENST00000600517 POLKQ9UBT6 870 aa18.49■□□□□ 0.55
ARHGEF1-222ENST00000600517 FLT4P35916 1363 aa18.49■□□□□ 0.55
ARHGEF1-222ENST00000600517 NSD2O96028 1365 aa18.48■□□□□ 0.55
ARHGEF1-222ENST00000600517 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
ARHGEF1-222ENST00000600517 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
ARHGEF1-222ENST00000600517 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
ARHGEF1-222ENST00000600517 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
ARHGEF1-222ENST00000600517 BCL9O00512 1426 aa18.47■□□□□ 0.55
ARHGEF1-222ENST00000600517 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
ARHGEF1-222ENST00000600517 PPM1GO15355 546 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-222ENST00000600517 PER1O15534 1290 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-222ENST00000600517 APBA3O96018 575 aa18.46■□□□□ 0.55
ARHGEF1-222ENST00000600517 EN1Q05925 392 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-222ENST00000600517 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-222ENST00000600517 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-222ENST00000600517 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
ARHGEF1-222ENST00000600517 SMG6Q86US8 1419 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-222ENST00000600517 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
ARHGEF1-222ENST00000600517 RGPD1P0DJD0 1748 aa18.44■□□□□ 0.54
ARHGEF1-222ENST00000600517 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
ARHGEF1-222ENST00000600517 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
ARHGEF1-222ENST00000600517 CAMKK2Q96RR4 588 aa18.44■□□□□ 0.54
ARHGEF1-222ENST00000600517 BCL11BQ9C0K0 894 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF1-222ENST00000600517 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
ARHGEF1-222ENST00000600517 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
ARHGEF1-222ENST00000600517 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
ARHGEF1-222ENST00000600517 PTF1AQ7RTS3 328 aa18.4■□□□□ 0.54
ARHGEF1-222ENST00000600517 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
ARHGEF1-222ENST00000600517 PARD3Q8TEW0 1356 aa18.4■□□□□ 0.54
ARHGEF1-222ENST00000600517 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
ARHGEF1-222ENST00000600517 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
ARHGEF1-222ENST00000600517 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
ARHGEF1-222ENST00000600517 ANKRD26Q9UPS8 1709 aa18.39■□□□□ 0.53
ARHGEF1-222ENST00000600517 PLSCR1O15162 318 aa18.38■□□□□ 0.53
ARHGEF1-222ENST00000600517 EYA1Q99502 592 aa18.38■□□□□ 0.53
ARHGEF1-222ENST00000600517 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF1-222ENST00000600517 MEGF6O75095 1541 aa18.37■□□□□ 0.53
ARHGEF1-222ENST00000600517 KCNQ2O43526 872 aa18.36■□□□□ 0.53
ARHGEF1-222ENST00000600517 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-222ENST00000600517 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-222ENST00000600517 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms