RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SLIT2O94813 1529 aa16.5■□□□□ 0.23
TGFB1-204ENST00000600196 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
TGFB1-204ENST00000600196 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
TGFB1-204ENST00000600196 COL18A1P39060 1754 aa16.49■□□□□ 0.23
TGFB1-204ENST00000600196 SOX12O15370 315 aa16.49■□□□□ 0.23
TGFB1-204ENST00000600196 DIAPH1O60610 1272 aaKnown RBP16.49■□□□□ 0.23
TGFB1-204ENST00000600196 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
TGFB1-204ENST00000600196 HSP90AB2PQ58FF8 381 aa16.48■□□□□ 0.23
TGFB1-204ENST00000600196 AXIN2Q9Y2T1 843 aa16.48■□□□□ 0.23
TGFB1-204ENST00000600196 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
TGFB1-204ENST00000600196 LRP6O75581 1613 aa16.48■□□□□ 0.23
TGFB1-204ENST00000600196 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
TGFB1-204ENST00000600196 ERBB3P21860 1342 aa16.47■□□□□ 0.23
TGFB1-204ENST00000600196 WDR17Q8IZU2 1322 aa16.47■□□□□ 0.23
TGFB1-204ENST00000600196 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-204ENST00000600196 FBLN1P23142 703 aa16.47■□□□□ 0.23
TGFB1-204ENST00000600196 EVA1CP58658 441 aa16.47■□□□□ 0.23
TGFB1-204ENST00000600196 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-204ENST00000600196 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
TGFB1-204ENST00000600196 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
TGFB1-204ENST00000600196 LTN1O94822 1766 aa16.46■□□□□ 0.23
TGFB1-204ENST00000600196 IL13P35225 146 aa16.46■□□□□ 0.23
TGFB1-204ENST00000600196 CHRNA2Q15822 529 aa16.46■□□□□ 0.23
TGFB1-204ENST00000600196 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
TGFB1-204ENST00000600196 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
TGFB1-204ENST00000600196 CAMTA1Q9Y6Y1 1673 aa16.46■□□□□ 0.23
TGFB1-204ENST00000600196 VPS72Q15906 364 aa16.45■□□□□ 0.22
TGFB1-204ENST00000600196 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
TGFB1-204ENST00000600196 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
TGFB1-204ENST00000600196 CARD10Q9BWT7 1032 aa16.45■□□□□ 0.22
TGFB1-204ENST00000600196 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
TGFB1-204ENST00000600196 BCL9LQ86UU0 1499 aa16.44■□□□□ 0.22
TGFB1-204ENST00000600196 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
TGFB1-204ENST00000600196 USP21Q9UK80 565 aa16.44■□□□□ 0.22
TGFB1-204ENST00000600196 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
TGFB1-204ENST00000600196 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
TGFB1-204ENST00000600196 CNGB1Q14028 1251 aaPredicted RBP16.43■□□□□ 0.22
TGFB1-204ENST00000600196 CRB1P82279 1406 aa16.43■□□□□ 0.22
TGFB1-204ENST00000600196 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
TGFB1-204ENST00000600196 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
TGFB1-204ENST00000600196 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
TGFB1-204ENST00000600196 FCHSD2O94868 740 aa16.42■□□□□ 0.22
TGFB1-204ENST00000600196 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
TGFB1-204ENST00000600196 AFF2P51816 1311 aa16.42■□□□□ 0.22
TGFB1-204ENST00000600196 IGSF1Q8N6C5 1336 aa16.42■□□□□ 0.22
TGFB1-204ENST00000600196 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
TGFB1-204ENST00000600196 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
TGFB1-204ENST00000600196 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
TGFB1-204ENST00000600196 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
TGFB1-204ENST00000600196 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
TGFB1-204ENST00000600196 EYA1Q99502 592 aa16.4■□□□□ 0.22
TGFB1-204ENST00000600196 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
TGFB1-204ENST00000600196 SPATA31A5Q5VU36 1347 aa16.4■□□□□ 0.22
TGFB1-204ENST00000600196 SPATA31A7Q8IWB4 1347 aa16.4■□□□□ 0.22
TGFB1-204ENST00000600196 KDRP35968 1356 aa16.39■□□□□ 0.21
TGFB1-204ENST00000600196 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
TGFB1-204ENST00000600196 MIER1Q8N108 512 aa16.39■□□□□ 0.21
TGFB1-204ENST00000600196 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
TGFB1-204ENST00000600196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
TGFB1-204ENST00000600196 SPATA31A1Q5TZJ5 1347 aa16.39■□□□□ 0.21
TGFB1-204ENST00000600196 ATRNO75882 1429 aa16.38■□□□□ 0.21
TGFB1-204ENST00000600196 PLCH1Q4KWH8 1693 aa16.38■□□□□ 0.21
TGFB1-204ENST00000600196 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
TGFB1-204ENST00000600196 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
TGFB1-204ENST00000600196 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
TGFB1-204ENST00000600196 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
TGFB1-204ENST00000600196 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
TGFB1-204ENST00000600196 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
TGFB1-204ENST00000600196 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
TGFB1-204ENST00000600196 GJD4Q96KN9 370 aaPredicted RBP16.37■□□□□ 0.21
TGFB1-204ENST00000600196 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
TGFB1-204ENST00000600196 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
TGFB1-204ENST00000600196 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
TGFB1-204ENST00000600196 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
TGFB1-204ENST00000600196 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
TGFB1-204ENST00000600196 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
TGFB1-204ENST00000600196 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
TGFB1-204ENST00000600196 AMOTQ4VCS5 1084 aa16.35■□□□□ 0.21
TGFB1-204ENST00000600196 NGEFQ8N5V2 710 aa16.35■□□□□ 0.21
TGFB1-204ENST00000600196 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
TGFB1-204ENST00000600196 NEFMP07197 916 aa16.34■□□□□ 0.21
TGFB1-204ENST00000600196 IL2RBP14784 551 aa16.34■□□□□ 0.21
TGFB1-204ENST00000600196 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
TGFB1-204ENST00000600196 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
TGFB1-204ENST00000600196 RGPD1P0DJD0 1748 aa16.33■□□□□ 0.21
TGFB1-204ENST00000600196 RGPD5Q99666 1765 aa16.33■□□□□ 0.21
TGFB1-204ENST00000600196 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.2
TGFB1-204ENST00000600196 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
TGFB1-204ENST00000600196 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
TGFB1-204ENST00000600196 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
TGFB1-204ENST00000600196 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
TGFB1-204ENST00000600196 RXRBP28702 533 aa16.3■□□□□ 0.2
TGFB1-204ENST00000600196 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
TGFB1-204ENST00000600196 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
TGFB1-204ENST00000600196 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
TGFB1-204ENST00000600196 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
TGFB1-204ENST00000600196 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
TGFB1-204ENST00000600196 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
TGFB1-204ENST00000600196 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
TGFB1-204ENST00000600196 EXOC5O00471 708 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms