RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
TMEM38A-203ENST00000599479 SOX12O15370 315 aa16.84■□□□□ 0.29
TMEM38A-203ENST00000599479 THRAP3Q9Y2W1 955 aaKnown RBP16.84■□□□□ 0.29
TMEM38A-203ENST00000599479 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
TMEM38A-203ENST00000599479 ABCC6O95255 1503 aa16.84■□□□□ 0.29
TMEM38A-203ENST00000599479 FAM98CQ17RN3 349 aaKnown RBP16.83■□□□□ 0.28
TMEM38A-203ENST00000599479 IP6K1Q92551 441 aa16.83■□□□□ 0.28
TMEM38A-203ENST00000599479 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
TMEM38A-203ENST00000599479 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
TMEM38A-203ENST00000599479 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
TMEM38A-203ENST00000599479 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
TMEM38A-203ENST00000599479 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM38A-203ENST00000599479 CRB1P82279 1406 aa16.81■□□□□ 0.28
TMEM38A-203ENST00000599479 MAP3K19Q56UN5 1328 aa16.81■□□□□ 0.28
TMEM38A-203ENST00000599479 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
TMEM38A-203ENST00000599479 FBLN1P23142 703 aa16.81■□□□□ 0.28
TMEM38A-203ENST00000599479 EP400Q96L91 3159 aa16.8■□□□□ 0.28
TMEM38A-203ENST00000599479 ZBTB7CA1YPR0 619 aa16.8■□□□□ 0.28
TMEM38A-203ENST00000599479 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
TMEM38A-203ENST00000599479 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
TMEM38A-203ENST00000599479 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
TMEM38A-203ENST00000599479 ERBB3P21860 1342 aa16.79■□□□□ 0.28
TMEM38A-203ENST00000599479 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
TMEM38A-203ENST00000599479 BLMP54132 1417 aaPredicted RBP16.78■□□□□ 0.28
TMEM38A-203ENST00000599479 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.28
TMEM38A-203ENST00000599479 HOXC9P31274 260 aa16.77■□□□□ 0.28
TMEM38A-203ENST00000599479 TOM1L2Q6ZVM7 507 aa16.77■□□□□ 0.28
TMEM38A-203ENST00000599479 USP35Q9P2H5 1018 aa16.77■□□□□ 0.28
TMEM38A-203ENST00000599479 THSD7AQ9UPZ6 1657 aa16.76■□□□□ 0.27
TMEM38A-203ENST00000599479 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
TMEM38A-203ENST00000599479 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
TMEM38A-203ENST00000599479 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
TMEM38A-203ENST00000599479 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
TMEM38A-203ENST00000599479 NSD2O96028 1365 aa16.75■□□□□ 0.27
TMEM38A-203ENST00000599479 AMPHP49418 695 aa16.74■□□□□ 0.27
TMEM38A-203ENST00000599479 CCDC125Q86Z20 511 aa16.74■□□□□ 0.27
TMEM38A-203ENST00000599479 CDCA7Q9BWT1 371 aaPredicted RBP16.74■□□□□ 0.27
TMEM38A-203ENST00000599479 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
TMEM38A-203ENST00000599479 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
TMEM38A-203ENST00000599479 POLKQ9UBT6 870 aa16.73■□□□□ 0.27
TMEM38A-203ENST00000599479 DISP2A7MBM2 1401 aa16.72■□□□□ 0.27
TMEM38A-203ENST00000599479 INSRP06213 1382 aa16.72■□□□□ 0.27
TMEM38A-203ENST00000599479 KIF20BQ96Q89 1820 aa16.71■□□□□ 0.27
TMEM38A-203ENST00000599479 HSP90AB2PQ58FF8 381 aa16.71■□□□□ 0.27
TMEM38A-203ENST00000599479 LTN1O94822 1766 aa16.71■□□□□ 0.27
TMEM38A-203ENST00000599479 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
TMEM38A-203ENST00000599479 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 FLT4P35916 1363 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 A0A0G2JS52 829 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 MYT1Q01538 1121 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
TMEM38A-203ENST00000599479 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
TMEM38A-203ENST00000599479 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
TMEM38A-203ENST00000599479 FAM196AQ6ZSG2 479 aa16.68■□□□□ 0.26
TMEM38A-203ENST00000599479 DDB1Q16531 1140 aa16.67■□□□□ 0.26
TMEM38A-203ENST00000599479 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
TMEM38A-203ENST00000599479 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
TMEM38A-203ENST00000599479 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
TMEM38A-203ENST00000599479 IL2RBP14784 551 aa16.66■□□□□ 0.26
TMEM38A-203ENST00000599479 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
TMEM38A-203ENST00000599479 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
TMEM38A-203ENST00000599479 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
TMEM38A-203ENST00000599479 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
TMEM38A-203ENST00000599479 BCL9O00512 1426 aa16.65■□□□□ 0.26
TMEM38A-203ENST00000599479 EXOC5O00471 708 aa16.65■□□□□ 0.26
TMEM38A-203ENST00000599479 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
TMEM38A-203ENST00000599479 MARCH10Q8NA82 808 aaPredicted RBP16.64■□□□□ 0.25
TMEM38A-203ENST00000599479 ANKRD26Q9UPS8 1709 aa16.63■□□□□ 0.25
TMEM38A-203ENST00000599479 TNNT2P45379 298 aaPredicted RBP16.63■□□□□ 0.25
TMEM38A-203ENST00000599479 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
TMEM38A-203ENST00000599479 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
TMEM38A-203ENST00000599479 FAM208AQ9UK61 1670 aaKnown RBP16.6■□□□□ 0.25
TMEM38A-203ENST00000599479 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
TMEM38A-203ENST00000599479 TNS2Q63HR2 1409 aa16.6■□□□□ 0.25
TMEM38A-203ENST00000599479 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
TMEM38A-203ENST00000599479 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
TMEM38A-203ENST00000599479 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
TMEM38A-203ENST00000599479 EYA1Q99502 592 aa16.59■□□□□ 0.25
TMEM38A-203ENST00000599479 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
TMEM38A-203ENST00000599479 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
TMEM38A-203ENST00000599479 TRIM37O94972 964 aa16.57■□□□□ 0.24
TMEM38A-203ENST00000599479 DEFB132Q7Z7B7 95 aa16.57■□□□□ 0.24
TMEM38A-203ENST00000599479 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
TMEM38A-203ENST00000599479 MTHFSP49914 203 aa16.56■□□□□ 0.24
TMEM38A-203ENST00000599479 SF3B2Q13435 895 aaKnown RBP16.56■□□□□ 0.24
TMEM38A-203ENST00000599479 ZCRB1Q8TBF4 217 aaKnown RBP16.56■□□□□ 0.24
TMEM38A-203ENST00000599479 MEGF6O75095 1541 aa16.55■□□□□ 0.24
TMEM38A-203ENST00000599479 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
TMEM38A-203ENST00000599479 IL13P35225 146 aa16.55■□□□□ 0.24
TMEM38A-203ENST00000599479 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
TMEM38A-203ENST00000599479 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
TMEM38A-203ENST00000599479 BAG6P46379 1132 aa16.54■□□□□ 0.24
TMEM38A-203ENST00000599479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.54■□□□□ 0.24
TMEM38A-203ENST00000599479 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
TMEM38A-203ENST00000599479 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
TMEM38A-203ENST00000599479 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
TMEM38A-203ENST00000599479 CAMKK2Q96RR4 588 aa16.53■□□□□ 0.24
TMEM38A-203ENST00000599479 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms