RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
LINC00343-208ENST00000599264 ITPKCQ96DU7 683 aa13.13□□□□□ -0.31
LINC00343-208ENST00000599264 UPP2O95045 317 aa13.12□□□□□ -0.31
LINC00343-208ENST00000599264 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
LINC00343-208ENST00000599264 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
LINC00343-208ENST00000599264 KCTD15Q96SI1 283 aaPredicted RBP13.12□□□□□ -0.31
LINC00343-208ENST00000599264 TRIM34Q9BYJ4 488 aa13.12□□□□□ -0.31
LINC00343-208ENST00000599264 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
LINC00343-208ENST00000599264 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
LINC00343-208ENST00000599264 PGPEP1Q9NXJ5 209 aa13.11□□□□□ -0.31
LINC00343-208ENST00000599264 ZFP42Q96MM3 310 aa13.1□□□□□ -0.31
LINC00343-208ENST00000599264 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
LINC00343-208ENST00000599264 SOCS7O14512 581 aa13.08□□□□□ -0.32
LINC00343-208ENST00000599264 OCSTAMPQ9BR26 566 aa13.08□□□□□ -0.32
LINC00343-208ENST00000599264 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
LINC00343-208ENST00000599264 PPP1R26Q5T8A7 1209 aaPredicted RBP13.06□□□□□ -0.32
LINC00343-208ENST00000599264 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
LINC00343-208ENST00000599264 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
LINC00343-208ENST00000599264 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
LINC00343-208ENST00000599264 MEIOBQ8N635 442 aa13.04□□□□□ -0.32
LINC00343-208ENST00000599264 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
LINC00343-208ENST00000599264 BMP2P12643 396 aa13.03□□□□□ -0.32
LINC00343-208ENST00000599264 INTS6LQ5JSJ4 861 aaKnown RBP13.03□□□□□ -0.32
LINC00343-208ENST00000599264 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
LINC00343-208ENST00000599264 NDUFB9Q9Y6M9 179 aa13.03□□□□□ -0.32
LINC00343-208ENST00000599264 WFS1O76024 890 aa13.02□□□□□ -0.33
LINC00343-208ENST00000599264 C6orf118Q5T5N4 469 aa13.02□□□□□ -0.33
LINC00343-208ENST00000599264 LINC00528Q8N1L1 170 aa13.02□□□□□ -0.33
LINC00343-208ENST00000599264 ZNF592Q92610 1267 aa13.02□□□□□ -0.33
LINC00343-208ENST00000599264 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
LINC00343-208ENST00000599264 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
LINC00343-208ENST00000599264 TERTO14746 1132 aaKnown RBP13□□□□□ -0.33
LINC00343-208ENST00000599264 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
LINC00343-208ENST00000599264 MCCD1P59942 119 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-208ENST00000599264 SLC16A10Q8TF71 515 aa12.99□□□□□ -0.33
LINC00343-208ENST00000599264 FBXO45P0C2W1 286 aa12.98□□□□□ -0.33
LINC00343-208ENST00000599264 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
LINC00343-208ENST00000599264 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
LINC00343-208ENST00000599264 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
LINC00343-208ENST00000599264 PCDHB9Q9Y5E1 797 aa12.98□□□□□ -0.33
LINC00343-208ENST00000599264 RAB15P59190 212 aa12.97□□□□□ -0.33
LINC00343-208ENST00000599264 MAN1A2O60476 641 aa12.96□□□□□ -0.33
LINC00343-208ENST00000599264 NR1H3Q13133 447 aa12.96□□□□□ -0.33
LINC00343-208ENST00000599264 Q6ZVU0 165 aa12.96□□□□□ -0.33
LINC00343-208ENST00000599264 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
LINC00343-208ENST00000599264 NPAS3Q8IXF0 933 aa12.96□□□□□ -0.33
LINC00343-208ENST00000599264 NFX1Q12986 1120 aaKnown RBP12.95□□□□□ -0.34
LINC00343-208ENST00000599264 ESPNB1AK53 854 aa12.94□□□□□ -0.34
LINC00343-208ENST00000599264 CBLBQ13191 982 aa12.94□□□□□ -0.34
LINC00343-208ENST00000599264 ERVH48-1M5A8F1 160 aa12.92□□□□□ -0.34
LINC00343-208ENST00000599264 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
LINC00343-208ENST00000599264 LCE2AQ5TA79 106 aaPredicted RBP12.91□□□□□ -0.34
LINC00343-208ENST00000599264 TMPRSS4Q9NRS4 437 aa12.9□□□□□ -0.34
LINC00343-208ENST00000599264 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-208ENST00000599264 TTLL8A6PVC2 850 aa12.89□□□□□ -0.35
LINC00343-208ENST00000599264 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-208ENST00000599264 SOBPA7XYQ1 873 aa12.88□□□□□ -0.35
LINC00343-208ENST00000599264 SPINT1O43278 529 aa12.88□□□□□ -0.35
LINC00343-208ENST00000599264 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-208ENST00000599264 RELBQ01201 579 aa12.87□□□□□ -0.35
LINC00343-208ENST00000599264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.87□□□□□ -0.35
LINC00343-208ENST00000599264 IRF7Q92985 503 aa12.86□□□□□ -0.35
LINC00343-208ENST00000599264 ADH1AP07327 375 aa12.85□□□□□ -0.35
LINC00343-208ENST00000599264 AGBL1Q96MI9 1066 aa12.85□□□□□ -0.35
LINC00343-208ENST00000599264 H3BM21 787 aa12.84□□□□□ -0.35
LINC00343-208ENST00000599264 DNMT3LQ9UJW3 386 aa12.84□□□□□ -0.35
LINC00343-208ENST00000599264 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
LINC00343-208ENST00000599264 GPR37L1O60883 481 aa12.83□□□□□ -0.36
LINC00343-208ENST00000599264 LILRA1O75019 489 aa12.83□□□□□ -0.36
LINC00343-208ENST00000599264 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
LINC00343-208ENST00000599264 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
LINC00343-208ENST00000599264 WIPF1O43516 503 aa12.82□□□□□ -0.36
LINC00343-208ENST00000599264 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00343-208ENST00000599264 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
LINC00343-208ENST00000599264 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
LINC00343-208ENST00000599264 VEGFBP49765 207 aa12.81□□□□□ -0.36
LINC00343-208ENST00000599264 FIGNL2A6NMB9 653 aa12.8□□□□□ -0.36
LINC00343-208ENST00000599264 PTGIRP43119 386 aa12.8□□□□□ -0.36
LINC00343-208ENST00000599264 INSM1Q01101 510 aaPredicted RBP12.8□□□□□ -0.36
LINC00343-208ENST00000599264 ZNF395Q9H8N7 513 aaPredicted RBP12.8□□□□□ -0.36
LINC00343-208ENST00000599264 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
LINC00343-208ENST00000599264 INSM2Q96T92 566 aaPredicted RBP12.79□□□□□ -0.36
LINC00343-208ENST00000599264 PCDHB11Q9Y5F2 797 aa12.78□□□□□ -0.36
LINC00343-208ENST00000599264 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
LINC00343-208ENST00000599264 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
LINC00343-208ENST00000599264 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
LINC00343-208ENST00000599264 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
LINC00343-208ENST00000599264 MCM6Q14566 821 aa12.76□□□□□ -0.37
LINC00343-208ENST00000599264 WASHC4Q2M389 1173 aa12.76□□□□□ -0.37
LINC00343-208ENST00000599264 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
LINC00343-208ENST00000599264 PPFIA3O75145 1194 aa12.75□□□□□ -0.37
LINC00343-208ENST00000599264 ABL2P42684 1182 aa12.75□□□□□ -0.37
LINC00343-208ENST00000599264 PTSQ03393 145 aa12.74□□□□□ -0.37
LINC00343-208ENST00000599264 IRF5Q13568 498 aa12.74□□□□□ -0.37
LINC00343-208ENST00000599264 CYP2U1Q7Z449 544 aa12.73□□□□□ -0.37
LINC00343-208ENST00000599264 GMPRP36959 345 aa12.72□□□□□ -0.37
LINC00343-208ENST00000599264 LCE2CQ5TA81 110 aa12.72□□□□□ -0.37
LINC00343-208ENST00000599264 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
LINC00343-208ENST00000599264 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
LINC00343-208ENST00000599264 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms