RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	SLC19A1	P41440	591 aa		12.24	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	SLFNL1	Q499Z3	407 aa		12.24	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	RC3H1	Q5TC82	1133 aa	Known RBP	12.23	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	SKI	P12755	728 aa		12.22	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	ZNF787	Q6DD87	383 aa		12.22	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	RNF135	Q8IUD6	432 aa		12.22	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	GIGYF1	O75420	1035 aa	Predicted RBP	12.21	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	SRPK2	P78362	688 aa	Known RBP	12.21	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	EHBP1	Q8NDI1	1231 aa		12.21	□□□□□ -0.45
SOX2-OT-231	ENST00000599082	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.2	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	PPP1R15A	O75807	674 aa	Predicted RBP	12.2	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	PBXIP1	Q96AQ6	731 aa		12.2	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	CHIC2	Q9UKJ5	165 aa		12.2	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	CDV3	Q9UKY7	258 aa	Known RBP	12.2	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	NBPF20	Q3BBV1	942 aa		12.19	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	USP17L5	A8MUK1	530 aa		12.18	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	ESPN	B1AK53	854 aa		12.18	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	SPRYD7	Q5W111	196 aa		12.18	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	PLPP7	Q8NBV4	271 aa		12.18	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	USP17L3	A6NCW0	530 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	USP17L4	A6NCW7	530 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	TSGA10IP	Q3SY00	556 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	USP17L2	Q6R6M4	530 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	USP17L1	Q7RTZ2	530 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	PLEKHM2	Q8IWE5	1019 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	PDZRN3	Q9UPQ7	1066 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	MAP4K5	Q9Y4K4	846 aa		12.17	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	WNT7A	O00755	349 aa		12.16	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	DEPDC4	Q8N2C3	294 aa		12.16	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.16	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	KCTD15	Q96SI1	283 aa	Predicted RBP	12.16	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	SIAH2	O43255	324 aa		12.15	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	RNF20	Q5VTR2	975 aa		12.15	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	VASH1	Q7L8A9	365 aa	Predicted RBP	12.15	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	ZNF775	Q96BV0	537 aa	Predicted RBP	12.15	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	CDK15	Q96Q40	435 aa		12.15	□□□□□ -0.46
SOX2-OT-231	ENST00000599082	MAP7D1	Q3KQU3	841 aa		12.14	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	KANK4	Q5T7N3	995 aa	Predicted RBP	12.14	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	SEPT12	Q8IYM1	358 aa		12.14	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	TLL2	Q9Y6L7	1015 aa		12.14	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	NCOA4	Q13772	614 aa		12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	ARID5B	Q14865	1188 aa		12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	CDCA8	Q53HL2	280 aa		12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	ZNF697	Q5TEC3	545 aa		12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	ZNF598	Q86UK7	904 aa	Known RBP	12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	MPND	Q8N594	471 aa		12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	MRGPRX2	Q96LB1	330 aa		12.13	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	LZTS3	O60299	673 aa	Predicted RBP	12.12	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	VRTN	Q9H8Y1	702 aa		12.12	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	DOLK	Q9UPQ8	538 aa		12.12	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	ACIN1	Q9UKV3	1341 aa	Known RBP	12.11	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	INTS6L	Q5JSJ4	861 aa	Known RBP	12.11	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	GRM5	P41594	1212 aa		12.1	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	RAB15	P59190	212 aa		12.1	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	CCDC125	Q86Z20	511 aa		12.1	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	EML3	Q32P44	896 aa		12.09	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	RETREG2	Q8NC44	543 aa		12.09	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.09	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	PKD2L1	Q9P0L9	805 aa		12.09	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	MKRN1	Q9UHC7	482 aa	Known RBP	12.09	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	PCDHB11	Q9Y5F2	797 aa		12.09	□□□□□ -0.47
SOX2-OT-231	ENST00000599082	ATG7	O95352	703 aa		12.08	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	FSHR	P23945	695 aa		12.08	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	ADH1C	P00326	375 aa		12.07	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	FOXC1	Q12948	553 aa		12.07	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	OXLD1	Q5BKU9	147 aa		12.07	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	ERVH48-1	M5A8F1	160 aa		12.06	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	ATP5J2-PTCD1	G3V325	749 aa		12.05	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	NOD1	Q9Y239	953 aa		12.04	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	FAM196B	A6NMK8	535 aa		12.03	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	GDF9	O60383	454 aa		12.03	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	NR5A1	Q13285	461 aa		12.03	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	CRTC2	Q53ET0	693 aa	Predicted RBP	12.03	□□□□□ -0.48
SOX2-OT-231	ENST00000599082	ALDH1A1	P00352	501 aa		12.02	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	NR3C2	P08235	984 aa		12.02	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	RASA1	P20936	1047 aa		12.02	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP4	Q13107	963 aa		12.02	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	ELOA	Q14241	798 aa	Known RBP	12.02	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TMPRSS4	Q9NRS4	437 aa		12.02	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L15	C9J2P7	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L10	C9JJH3	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L13	C9JLJ4	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L12	C9JPN9	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L11	C9JVI0	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L21	D6R901	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L18	D6R9N7	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L22	D6RA61	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L17	D6RBQ6	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L19	D6RCP7	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L20	D6RJB6	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	CSB-PGBD3	P0DP91	1061 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	SCTR	P47872	440 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	CLDN10	P78369	228 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	DHX9	Q08211	1270 aa	Known RBP	12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	USP17L24	Q0WX57	530 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	PTK7	Q13308	1070 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	TRIM50	Q86XT4	487 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	CCDC116	Q8IYX3	515 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	OGFOD1	Q8N543	542 aa		12.01	□□□□□ -0.49
SOX2-OT-231	ENST00000599082	SNIP1	Q8TAD8	396 aa	Known RBP	12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms