RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
SYMPK-210ENST00000598329 KIF7Q2M1P5 1343 aa17.36■□□□□ 0.37
SYMPK-210ENST00000598329 CRB1P82279 1406 aa17.36■□□□□ 0.37
SYMPK-210ENST00000598329 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
SYMPK-210ENST00000598329 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
SYMPK-210ENST00000598329 WDR17Q8IZU2 1322 aa17.35■□□□□ 0.37
SYMPK-210ENST00000598329 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
SYMPK-210ENST00000598329 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
SYMPK-210ENST00000598329 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
SYMPK-210ENST00000598329 IP6K1Q92551 441 aa17.34■□□□□ 0.37
SYMPK-210ENST00000598329 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
SYMPK-210ENST00000598329 PANK3Q9H999 370 aa17.34■□□□□ 0.37
SYMPK-210ENST00000598329 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
SYMPK-210ENST00000598329 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
SYMPK-210ENST00000598329 ERBB3P21860 1342 aa17.32■□□□□ 0.36
SYMPK-210ENST00000598329 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
SYMPK-210ENST00000598329 SOX12O15370 315 aa17.32■□□□□ 0.36
SYMPK-210ENST00000598329 CARD10Q9BWT7 1032 aa17.32■□□□□ 0.36
SYMPK-210ENST00000598329 KIF24Q5T7B8 1368 aa17.31■□□□□ 0.36
SYMPK-210ENST00000598329 KRT27Q7Z3Y8 459 aa17.3■□□□□ 0.36
SYMPK-210ENST00000598329 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
SYMPK-210ENST00000598329 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
SYMPK-210ENST00000598329 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
SYMPK-210ENST00000598329 FBLN1P23142 703 aa17.29■□□□□ 0.36
SYMPK-210ENST00000598329 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
SYMPK-210ENST00000598329 NSD2O96028 1365 aa17.28■□□□□ 0.36
SYMPK-210ENST00000598329 CCDC7Q96M83 1385 aa17.28■□□□□ 0.36
SYMPK-210ENST00000598329 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
SYMPK-210ENST00000598329 HOXC9P31274 260 aa17.28■□□□□ 0.36
SYMPK-210ENST00000598329 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
SYMPK-210ENST00000598329 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
SYMPK-210ENST00000598329 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
SYMPK-210ENST00000598329 DISP2A7MBM2 1401 aa17.27■□□□□ 0.35
SYMPK-210ENST00000598329 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
SYMPK-210ENST00000598329 KIF20BQ96Q89 1820 aa17.26■□□□□ 0.35
SYMPK-210ENST00000598329 LTN1O94822 1766 aa17.26■□□□□ 0.35
SYMPK-210ENST00000598329 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
SYMPK-210ENST00000598329 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
SYMPK-210ENST00000598329 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
SYMPK-210ENST00000598329 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
SYMPK-210ENST00000598329 AMPHP49418 695 aa17.24■□□□□ 0.35
SYMPK-210ENST00000598329 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
SYMPK-210ENST00000598329 INSRP06213 1382 aa17.24■□□□□ 0.35
SYMPK-210ENST00000598329 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
SYMPK-210ENST00000598329 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
SYMPK-210ENST00000598329 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
SYMPK-210ENST00000598329 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
SYMPK-210ENST00000598329 FLT4P35916 1363 aa17.22■□□□□ 0.35
SYMPK-210ENST00000598329 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
SYMPK-210ENST00000598329 BCL9O00512 1426 aa17.21■□□□□ 0.35
SYMPK-210ENST00000598329 A0A0G2JS52 829 aa17.2■□□□□ 0.34
SYMPK-210ENST00000598329 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SYMPK-210ENST00000598329 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
SYMPK-210ENST00000598329 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
SYMPK-210ENST00000598329 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
SYMPK-210ENST00000598329 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
SYMPK-210ENST00000598329 ANKRD26Q9UPS8 1709 aa17.19■□□□□ 0.34
SYMPK-210ENST00000598329 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
SYMPK-210ENST00000598329 SMG6Q86US8 1419 aaKnown RBP17.19■□□□□ 0.34
SYMPK-210ENST00000598329 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
SYMPK-210ENST00000598329 DDB1Q16531 1140 aa17.18■□□□□ 0.34
SYMPK-210ENST00000598329 FAM208AQ9UK61 1670 aaKnown RBP17.17■□□□□ 0.34
SYMPK-210ENST00000598329 IL2RBP14784 551 aa17.17■□□□□ 0.34
SYMPK-210ENST00000598329 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
SYMPK-210ENST00000598329 EXOC5O00471 708 aa17.16■□□□□ 0.34
SYMPK-210ENST00000598329 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
SYMPK-210ENST00000598329 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
SYMPK-210ENST00000598329 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
SYMPK-210ENST00000598329 LRRC37A3O60309 1634 aa17.16■□□□□ 0.34
SYMPK-210ENST00000598329 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
SYMPK-210ENST00000598329 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
SYMPK-210ENST00000598329 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
SYMPK-210ENST00000598329 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
SYMPK-210ENST00000598329 TNS2Q63HR2 1409 aa17.14■□□□□ 0.33
SYMPK-210ENST00000598329 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
SYMPK-210ENST00000598329 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
SYMPK-210ENST00000598329 MAP2P11137 1827 aaKnown RBP17.12■□□□□ 0.33
SYMPK-210ENST00000598329 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
SYMPK-210ENST00000598329 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-210ENST00000598329 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
SYMPK-210ENST00000598329 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
SYMPK-210ENST00000598329 EYA1Q99502 592 aa17.09■□□□□ 0.33
SYMPK-210ENST00000598329 MEGF6O75095 1541 aa17.08■□□□□ 0.32
SYMPK-210ENST00000598329 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
SYMPK-210ENST00000598329 TRIM37O94972 964 aa17.08■□□□□ 0.32
SYMPK-210ENST00000598329 IGSF1Q8N6C5 1336 aa17.07■□□□□ 0.32
SYMPK-210ENST00000598329 BAG6P46379 1132 aa17.07■□□□□ 0.32
SYMPK-210ENST00000598329 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
SYMPK-210ENST00000598329 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
SYMPK-210ENST00000598329 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-210ENST00000598329 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
SYMPK-210ENST00000598329 PARD3Q8TEW0 1356 aa17.06■□□□□ 0.32
SYMPK-210ENST00000598329 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
SYMPK-210ENST00000598329 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
SYMPK-210ENST00000598329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
SYMPK-210ENST00000598329 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
SYMPK-210ENST00000598329 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
SYMPK-210ENST00000598329 PLSCR1O15162 318 aa17.05■□□□□ 0.32
SYMPK-210ENST00000598329 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
SYMPK-210ENST00000598329 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms