RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 BTG4Q9NY30 223 aa14.02□□□□□ -0.17
LINC00343-205ENST00000598229 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
LINC00343-205ENST00000598229 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
LINC00343-205ENST00000598229 PDAP1Q13442 181 aaKnown RBP14□□□□□ -0.17
LINC00343-205ENST00000598229 TMEM132EQ6IEE7 984 aa14□□□□□ -0.17
LINC00343-205ENST00000598229 FAM196AQ6ZSG2 479 aa14□□□□□ -0.17
LINC00343-205ENST00000598229 FMN2Q9NZ56 1722 aa14□□□□□ -0.17
LINC00343-205ENST00000598229 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
LINC00343-205ENST00000598229 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
LINC00343-205ENST00000598229 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
LINC00343-205ENST00000598229 PPLO60437 1756 aa13.99□□□□□ -0.17
LINC00343-205ENST00000598229 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
LINC00343-205ENST00000598229 FAM182BQ5T319 152 aa13.99□□□□□ -0.17
LINC00343-205ENST00000598229 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
LINC00343-205ENST00000598229 TRIM37O94972 964 aa13.96□□□□□ -0.17
LINC00343-205ENST00000598229 APBA3O96018 575 aa13.96□□□□□ -0.17
LINC00343-205ENST00000598229 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
LINC00343-205ENST00000598229 NBPF14Q5TI25 921 aa13.96□□□□□ -0.17
LINC00343-205ENST00000598229 RGL3Q3MIN7 710 aa13.95□□□□□ -0.18
LINC00343-205ENST00000598229 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
LINC00343-205ENST00000598229 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
LINC00343-205ENST00000598229 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
LINC00343-205ENST00000598229 PIK3C2GO75747 1445 aa13.94□□□□□ -0.18
LINC00343-205ENST00000598229 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
LINC00343-205ENST00000598229 KNDC1Q76NI1 1749 aa13.94□□□□□ -0.18
LINC00343-205ENST00000598229 ANKARQ7Z5J8 1434 aa13.94□□□□□ -0.18
LINC00343-205ENST00000598229 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
LINC00343-205ENST00000598229 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
LINC00343-205ENST00000598229 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
LINC00343-205ENST00000598229 SPATA31A1Q5TZJ5 1347 aa13.93□□□□□ -0.18
LINC00343-205ENST00000598229 ADGRB2O60241 1585 aa13.93□□□□□ -0.18
LINC00343-205ENST00000598229 KCNQ2O43526 872 aa13.93□□□□□ -0.18
LINC00343-205ENST00000598229 PMFBP1Q8TBY8 1022 aa13.93□□□□□ -0.18
LINC00343-205ENST00000598229 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
LINC00343-205ENST00000598229 THSD7AQ9UPZ6 1657 aa13.93□□□□□ -0.18
LINC00343-205ENST00000598229 COL14A1Q05707 1796 aaKnown RBP13.93□□□□□ -0.18
LINC00343-205ENST00000598229 ABCA3Q99758 1704 aa13.93□□□□□ -0.18
LINC00343-205ENST00000598229 L3MBTL3Q96JM7 780 aaPredicted RBP13.92□□□□□ -0.18
LINC00343-205ENST00000598229 GPRASP1Q5JY77 1395 aa13.92□□□□□ -0.18
LINC00343-205ENST00000598229 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
LINC00343-205ENST00000598229 TNS1Q9HBL0 1735 aaKnown RBP13.92□□□□□ -0.18
LINC00343-205ENST00000598229 PRDM11Q9NQV5 511 aa13.91□□□□□ -0.18
LINC00343-205ENST00000598229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC00343-205ENST00000598229 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
LINC00343-205ENST00000598229 PRAM1Q96QH2 718 aa13.9□□□□□ -0.18
LINC00343-205ENST00000598229 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.19
LINC00343-205ENST00000598229 C11orf95C9JLR9 678 aaPredicted RBP13.89□□□□□ -0.19
LINC00343-205ENST00000598229 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
LINC00343-205ENST00000598229 SNPHO15079 494 aa13.88□□□□□ -0.19
LINC00343-205ENST00000598229 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
LINC00343-205ENST00000598229 RGPD8O14715 1765 aaPredicted RBP13.87□□□□□ -0.19
LINC00343-205ENST00000598229 POGKQ9P215 609 aa13.87□□□□□ -0.19
LINC00343-205ENST00000598229 IFT172Q9UG01 1749 aa13.87□□□□□ -0.19
LINC00343-205ENST00000598229 EIF3AQ14152 1382 aaKnown RBP13.86□□□□□ -0.19
LINC00343-205ENST00000598229 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC00343-205ENST00000598229 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
LINC00343-205ENST00000598229 TRPM3Q9HCF6 1732 aaPredicted RBP13.86□□□□□ -0.19
LINC00343-205ENST00000598229 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
LINC00343-205ENST00000598229 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
LINC00343-205ENST00000598229 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
LINC00343-205ENST00000598229 KIAA0232Q92628 1395 aa13.84□□□□□ -0.19
LINC00343-205ENST00000598229 ST18O60284 1047 aa13.84□□□□□ -0.19
LINC00343-205ENST00000598229 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
LINC00343-205ENST00000598229 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
LINC00343-205ENST00000598229 DLC1Q96QB1 1528 aa13.84□□□□□ -0.19
LINC00343-205ENST00000598229 RREB1Q92766 1687 aa13.83□□□□□ -0.2
LINC00343-205ENST00000598229 PLSCR1O15162 318 aa13.83□□□□□ -0.2
LINC00343-205ENST00000598229 EVA1CP58658 441 aa13.83□□□□□ -0.2
LINC00343-205ENST00000598229 CHRNA2Q15822 529 aa13.83□□□□□ -0.2
LINC00343-205ENST00000598229 THRAP3Q9Y2W1 955 aaKnown RBP13.83□□□□□ -0.2
LINC00343-205ENST00000598229 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
LINC00343-205ENST00000598229 WASLO00401 505 aaPredicted RBP13.82□□□□□ -0.2
LINC00343-205ENST00000598229 IFFO2Q5TF58 517 aa13.82□□□□□ -0.2
LINC00343-205ENST00000598229 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
LINC00343-205ENST00000598229 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
LINC00343-205ENST00000598229 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
LINC00343-205ENST00000598229 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
LINC00343-205ENST00000598229 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
LINC00343-205ENST00000598229 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
LINC00343-205ENST00000598229 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
LINC00343-205ENST00000598229 SSH2Q76I76 1423 aa13.8□□□□□ -0.2
LINC00343-205ENST00000598229 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
LINC00343-205ENST00000598229 HIRIP3Q9BW71 556 aaPredicted RBP13.79□□□□□ -0.2
LINC00343-205ENST00000598229 TULP4Q9NRJ4 1543 aa13.79□□□□□ -0.2
LINC00343-205ENST00000598229 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
LINC00343-205ENST00000598229 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
LINC00343-205ENST00000598229 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
LINC00343-205ENST00000598229 G3V3G9 751 aa13.77□□□□□ -0.21
LINC00343-205ENST00000598229 CPDO75976 1380 aa13.77□□□□□ -0.21
LINC00343-205ENST00000598229 PTGER2P43116 358 aa13.77□□□□□ -0.21
LINC00343-205ENST00000598229 MINK1Q8N4C8 1332 aaPredicted RBP13.77□□□□□ -0.21
LINC00343-205ENST00000598229 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
LINC00343-205ENST00000598229 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
LINC00343-205ENST00000598229 ATP7BP35670 1465 aa13.75□□□□□ -0.21
LINC00343-205ENST00000598229 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
LINC00343-205ENST00000598229 CDAN1Q8IWY9 1227 aa13.74□□□□□ -0.21
LINC00343-205ENST00000598229 SYT17Q9BSW7 474 aa13.74□□□□□ -0.21
LINC00343-205ENST00000598229 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
LINC00343-205ENST00000598229 CAMTA1Q9Y6Y1 1673 aa13.74□□□□□ -0.21
LINC00343-205ENST00000598229 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms