RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
PRKD2-208ENST00000597390 EVA1CP58658 441 aa18.73■□□□□ 0.59
PRKD2-208ENST00000597390 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
PRKD2-208ENST00000597390 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
PRKD2-208ENST00000597390 AATKQ6ZMQ8 1374 aa18.7■□□□□ 0.58
PRKD2-208ENST00000597390 COL5A2P05997 1499 aaPredicted RBP18.7■□□□□ 0.58
PRKD2-208ENST00000597390 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
PRKD2-208ENST00000597390 COL18A1P39060 1754 aa18.7■□□□□ 0.58
PRKD2-208ENST00000597390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.69■□□□□ 0.58
PRKD2-208ENST00000597390 KCNH5Q8NCM2 988 aa18.69■□□□□ 0.58
PRKD2-208ENST00000597390 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
PRKD2-208ENST00000597390 ZBTB7CA1YPR0 619 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 FYB1O15117 783 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
PRKD2-208ENST00000597390 ANKRD26Q9UPS8 1709 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 BARGINQ6ZT62 677 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 NME9Q86XW9 330 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 USP35Q9P2H5 1018 aa18.68■□□□□ 0.58
PRKD2-208ENST00000597390 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
PRKD2-208ENST00000597390 NFAT5O94916 1531 aa18.66■□□□□ 0.58
PRKD2-208ENST00000597390 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
PRKD2-208ENST00000597390 ARHGEF25Q86VW2 580 aa18.66■□□□□ 0.58
PRKD2-208ENST00000597390 TCP11L2Q8N4U5 519 aa18.66■□□□□ 0.58
PRKD2-208ENST00000597390 THRAP3Q9Y2W1 955 aaKnown RBP18.66■□□□□ 0.58
PRKD2-208ENST00000597390 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
PRKD2-208ENST00000597390 CRB1P82279 1406 aa18.65■□□□□ 0.58
PRKD2-208ENST00000597390 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
PRKD2-208ENST00000597390 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
PRKD2-208ENST00000597390 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
PRKD2-208ENST00000597390 NSD2O96028 1365 aa18.64■□□□□ 0.57
PRKD2-208ENST00000597390 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
PRKD2-208ENST00000597390 SOX12O15370 315 aa18.63■□□□□ 0.57
PRKD2-208ENST00000597390 FAM182BQ5T319 152 aa18.63■□□□□ 0.57
PRKD2-208ENST00000597390 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
PRKD2-208ENST00000597390 ABCC6O95255 1503 aa18.62■□□□□ 0.57
PRKD2-208ENST00000597390 DEFB132Q7Z7B7 95 aa18.62■□□□□ 0.57
PRKD2-208ENST00000597390 AXIN2Q9Y2T1 843 aa18.62■□□□□ 0.57
PRKD2-208ENST00000597390 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
PRKD2-208ENST00000597390 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
PRKD2-208ENST00000597390 LTN1O94822 1766 aa18.6■□□□□ 0.57
PRKD2-208ENST00000597390 WNK3Q9BYP7 1800 aa18.6■□□□□ 0.57
PRKD2-208ENST00000597390 TNS1Q9HBL0 1735 aaKnown RBP18.59■□□□□ 0.57
PRKD2-208ENST00000597390 BAG6P46379 1132 aa18.59■□□□□ 0.57
PRKD2-208ENST00000597390 PDE3BQ13370 1112 aa18.59■□□□□ 0.57
PRKD2-208ENST00000597390 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
PRKD2-208ENST00000597390 FAM196AQ6ZSG2 479 aa18.59■□□□□ 0.57
PRKD2-208ENST00000597390 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
PRKD2-208ENST00000597390 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
PRKD2-208ENST00000597390 COG3Q96JB2 828 aa18.58■□□□□ 0.57
PRKD2-208ENST00000597390 LRP5O75197 1615 aa18.57■□□□□ 0.56
PRKD2-208ENST00000597390 CNGB1Q14028 1251 aaPredicted RBP18.56■□□□□ 0.56
PRKD2-208ENST00000597390 LRRC37A3O60309 1634 aa18.56■□□□□ 0.56
PRKD2-208ENST00000597390 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
PRKD2-208ENST00000597390 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
PRKD2-208ENST00000597390 CSB-PGBD3P0DP91 1061 aa18.55■□□□□ 0.56
PRKD2-208ENST00000597390 CARD10Q9BWT7 1032 aa18.55■□□□□ 0.56
PRKD2-208ENST00000597390 DISP2A7MBM2 1401 aa18.54■□□□□ 0.56
PRKD2-208ENST00000597390 TRIM37O94972 964 aa18.53■□□□□ 0.56
PRKD2-208ENST00000597390 FBLN1P23142 703 aa18.53■□□□□ 0.56
PRKD2-208ENST00000597390 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
PRKD2-208ENST00000597390 EN1Q05925 392 aaPredicted RBP18.52■□□□□ 0.55
PRKD2-208ENST00000597390 RALBP1Q15311 655 aa18.52■□□□□ 0.55
PRKD2-208ENST00000597390 DDB1Q16531 1140 aa18.52■□□□□ 0.55
PRKD2-208ENST00000597390 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
PRKD2-208ENST00000597390 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
PRKD2-208ENST00000597390 TNNT2P45379 298 aaPredicted RBP18.51■□□□□ 0.55
PRKD2-208ENST00000597390 ERBB3P21860 1342 aa18.51■□□□□ 0.55
PRKD2-208ENST00000597390 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
PRKD2-208ENST00000597390 ANP32CO43423 234 aa18.5■□□□□ 0.55
PRKD2-208ENST00000597390 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
PRKD2-208ENST00000597390 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
PRKD2-208ENST00000597390 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
PRKD2-208ENST00000597390 POLKQ9UBT6 870 aa18.48■□□□□ 0.55
PRKD2-208ENST00000597390 FAM208AQ9UK61 1670 aaKnown RBP18.47■□□□□ 0.55
PRKD2-208ENST00000597390 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
PRKD2-208ENST00000597390 APBA3O96018 575 aa18.47■□□□□ 0.55
PRKD2-208ENST00000597390 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
PRKD2-208ENST00000597390 RRS1Q15050 365 aaKnown RBP18.46■□□□□ 0.55
PRKD2-208ENST00000597390 EZH2Q15910 746 aaKnown RBP18.46■□□□□ 0.55
PRKD2-208ENST00000597390 IP6K1Q92551 441 aa18.46■□□□□ 0.55
PRKD2-208ENST00000597390 CAMKK2Q96RR4 588 aa18.46■□□□□ 0.55
PRKD2-208ENST00000597390 MAP3K19Q56UN5 1328 aa18.46■□□□□ 0.55
PRKD2-208ENST00000597390 MYBBP1AQ9BQG0 1328 aaKnown RBP18.46■□□□□ 0.55
PRKD2-208ENST00000597390 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
PRKD2-208ENST00000597390 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
PRKD2-208ENST00000597390 RREB1Q92766 1687 aa18.45■□□□□ 0.54
PRKD2-208ENST00000597390 EXOC5O00471 708 aa18.44■□□□□ 0.54
PRKD2-208ENST00000597390 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
PRKD2-208ENST00000597390 BCL9O00512 1426 aa18.44■□□□□ 0.54
PRKD2-208ENST00000597390 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
PRKD2-208ENST00000597390 KIF24Q5T7B8 1368 aa18.43■□□□□ 0.54
PRKD2-208ENST00000597390 MTHFSP49914 203 aa18.43■□□□□ 0.54
PRKD2-208ENST00000597390 MIER1Q8N108 512 aa18.43■□□□□ 0.54
PRKD2-208ENST00000597390 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
PRKD2-208ENST00000597390 RGPD3A6NKT7 1758 aaPredicted RBP18.42■□□□□ 0.54
PRKD2-208ENST00000597390 RGPD4Q7Z3J3 1758 aa18.42■□□□□ 0.54
PRKD2-208ENST00000597390 IL2RBP14784 551 aa18.42■□□□□ 0.54
PRKD2-208ENST00000597390 HOXC9P31274 260 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms