RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 MYT1Q01538 1121 aa15.45■□□□□ 0.06
SH2D3A-206ENST00000597254 PRDM11Q9NQV5 511 aa15.45■□□□□ 0.06
SH2D3A-206ENST00000597254 COL14A1Q05707 1796 aaKnown RBP15.44■□□□□ 0.06
SH2D3A-206ENST00000597254 FBLN1P23142 703 aa15.43■□□□□ 0.06
SH2D3A-206ENST00000597254 MTHFSP49914 203 aa15.43■□□□□ 0.06
SH2D3A-206ENST00000597254 NUTM2GQ5VZR2 741 aa15.43■□□□□ 0.06
SH2D3A-206ENST00000597254 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
SH2D3A-206ENST00000597254 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
SH2D3A-206ENST00000597254 PIK3C2AO00443 1686 aa15.42■□□□□ 0.06
SH2D3A-206ENST00000597254 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
SH2D3A-206ENST00000597254 KRT27Q7Z3Y8 459 aa15.41■□□□□ 0.06
SH2D3A-206ENST00000597254 BRWD3Q6RI45 1802 aa15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 AATKQ6ZMQ8 1374 aa15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 KIAA0232Q92628 1395 aa15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 ZC3H6P61129 1189 aaKnown RBP15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 SF3B2Q13435 895 aaKnown RBP15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
SH2D3A-206ENST00000597254 CHRNA2Q15822 529 aa15.39■□□□□ 0.05
SH2D3A-206ENST00000597254 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
SH2D3A-206ENST00000597254 NRAPQ86VF7 1730 aa15.39■□□□□ 0.05
SH2D3A-206ENST00000597254 CRYBG1Q9Y4K1 1723 aa15.39■□□□□ 0.05
SH2D3A-206ENST00000597254 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
SH2D3A-206ENST00000597254 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
SH2D3A-206ENST00000597254 STRN4Q9NRL3 753 aa15.38■□□□□ 0.05
SH2D3A-206ENST00000597254 SPATA31A5Q5VU36 1347 aa15.38■□□□□ 0.05
SH2D3A-206ENST00000597254 SPATA31A7Q8IWB4 1347 aa15.38■□□□□ 0.05
SH2D3A-206ENST00000597254 USP54Q70EL1 1684 aa15.38■□□□□ 0.05
SH2D3A-206ENST00000597254 EP400Q96L91 3159 aa15.37■□□□□ 0.05
SH2D3A-206ENST00000597254 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
SH2D3A-206ENST00000597254 CFAP53Q96M91 514 aa15.37■□□□□ 0.05
SH2D3A-206ENST00000597254 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
SH2D3A-206ENST00000597254 SOX12O15370 315 aa15.36■□□□□ 0.05
SH2D3A-206ENST00000597254 EVA1CP58658 441 aa15.36■□□□□ 0.05
SH2D3A-206ENST00000597254 KCNH5Q8NCM2 988 aa15.36■□□□□ 0.05
SH2D3A-206ENST00000597254 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
SH2D3A-206ENST00000597254 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
SH2D3A-206ENST00000597254 USP19O94966 1318 aa15.35■□□□□ 0.05
SH2D3A-206ENST00000597254 GCP02774 474 aa15.34■□□□□ 0.05
SH2D3A-206ENST00000597254 INSRP06213 1382 aa15.34■□□□□ 0.05
SH2D3A-206ENST00000597254 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
SH2D3A-206ENST00000597254 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.04
SH2D3A-206ENST00000597254 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.04
SH2D3A-206ENST00000597254 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
SH2D3A-206ENST00000597254 CPDO75976 1380 aa15.32■□□□□ 0.04
SH2D3A-206ENST00000597254 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
SH2D3A-206ENST00000597254 SLIT3O75094 1523 aa15.32■□□□□ 0.04
SH2D3A-206ENST00000597254 ZBTB7CA1YPR0 619 aa15.31■□□□□ 0.04
SH2D3A-206ENST00000597254 DIAPH1O60610 1272 aaKnown RBP15.31■□□□□ 0.04
SH2D3A-206ENST00000597254 AMPHP49418 695 aa15.31■□□□□ 0.04
SH2D3A-206ENST00000597254 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
SH2D3A-206ENST00000597254 YTHDC1Q96MU7 727 aaKnown RBP15.31■□□□□ 0.04
SH2D3A-206ENST00000597254 ADAMTS8Q9UP79 889 aa15.31■□□□□ 0.04
SH2D3A-206ENST00000597254 BAG6P46379 1132 aa15.3■□□□□ 0.04
SH2D3A-206ENST00000597254 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
SH2D3A-206ENST00000597254 NUDCQ9Y266 331 aa15.3■□□□□ 0.04
SH2D3A-206ENST00000597254 NFAT5O94916 1531 aa15.29■□□□□ 0.04
SH2D3A-206ENST00000597254 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
SH2D3A-206ENST00000597254 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
SH2D3A-206ENST00000597254 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
SH2D3A-206ENST00000597254 CAMTA1Q9Y6Y1 1673 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 KIF24Q5T7B8 1368 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 HOXC9P31274 260 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 IL13P35225 146 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 HSP90AB2PQ58FF8 381 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 IP6K1Q92551 441 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 PEAK1Q9H792 1746 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 THSD7AQ9UPZ6 1657 aa15.28■□□□□ 0.04
SH2D3A-206ENST00000597254 FLT4P35916 1363 aa15.27■□□□□ 0.04
SH2D3A-206ENST00000597254 BARGINQ6ZT62 677 aa15.27■□□□□ 0.04
SH2D3A-206ENST00000597254 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
SH2D3A-206ENST00000597254 U2SURPO15042 1029 aaKnown RBP15.26■□□□□ 0.03
SH2D3A-206ENST00000597254 PDE3BQ13370 1112 aa15.26■□□□□ 0.03
SH2D3A-206ENST00000597254 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
SH2D3A-206ENST00000597254 FAM196AQ6ZSG2 479 aa15.26■□□□□ 0.03
SH2D3A-206ENST00000597254 LMO7Q8WWI1 1683 aa15.25■□□□□ 0.03
SH2D3A-206ENST00000597254 U2AF1L5P0DN76 240 aaPredicted RBP15.25■□□□□ 0.03
SH2D3A-206ENST00000597254 U2AF1Q01081 240 aaKnown RBP eCLIP15.25■□□□□ 0.03
SH2D3A-206ENST00000597254 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
SH2D3A-206ENST00000597254 LTN1O94822 1766 aa15.25■□□□□ 0.03
SH2D3A-206ENST00000597254 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
SH2D3A-206ENST00000597254 COL5A2P05997 1499 aaPredicted RBP15.23■□□□□ 0.03
SH2D3A-206ENST00000597254 HNRNPUQ00839 825 aaKnown RBP eCLIP15.23■□□□□ 0.03
SH2D3A-206ENST00000597254 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
SH2D3A-206ENST00000597254 TRIM37O94972 964 aa15.22■□□□□ 0.03
SH2D3A-206ENST00000597254 EN1Q05925 392 aaPredicted RBP15.22■□□□□ 0.03
SH2D3A-206ENST00000597254 CRB1P82279 1406 aa15.22■□□□□ 0.03
SH2D3A-206ENST00000597254 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
SH2D3A-206ENST00000597254 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
SH2D3A-206ENST00000597254 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
SH2D3A-206ENST00000597254 AXIN2Q9Y2T1 843 aa15.21■□□□□ 0.03
SH2D3A-206ENST00000597254 FCHSD2O94868 740 aa15.2■□□□□ 0.02
SH2D3A-206ENST00000597254 RUNDC1Q96C34 613 aa15.2■□□□□ 0.02
SH2D3A-206ENST00000597254 PNNQ9H307 717 aaKnown RBP15.2■□□□□ 0.02
SH2D3A-206ENST00000597254 APBA3O96018 575 aa15.19■□□□□ 0.02
SH2D3A-206ENST00000597254 HMOX1P09601 288 aa15.19■□□□□ 0.02
SH2D3A-206ENST00000597254 EYA1Q99502 592 aa15.19■□□□□ 0.02
SH2D3A-206ENST00000597254 COL18A1P39060 1754 aa15.19■□□□□ 0.02
SH2D3A-206ENST00000597254 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms