RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 CGNL1Q0VF96 1302 aa24.98■■□□□ 1.59
IRF3-216ENST00000597180 ZBTB7CA1YPR0 619 aa24.97■■□□□ 1.59
IRF3-216ENST00000597180 SPATA31A5Q5VU36 1347 aa24.95■■□□□ 1.58
IRF3-216ENST00000597180 SPATA31A7Q8IWB4 1347 aa24.95■■□□□ 1.58
IRF3-216ENST00000597180 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
IRF3-216ENST00000597180 AXIN2Q9Y2T1 843 aa24.94■■□□□ 1.58
IRF3-216ENST00000597180 CCDC9Q9Y3X0 531 aaKnown RBP24.94■■□□□ 1.58
IRF3-216ENST00000597180 BRWD3Q6RI45 1802 aa24.93■■□□□ 1.58
IRF3-216ENST00000597180 EVA1CP58658 441 aa24.93■■□□□ 1.58
IRF3-216ENST00000597180 THSD7AQ9UPZ6 1657 aa24.91■■□□□ 1.58
IRF3-216ENST00000597180 SPATA31A1Q5TZJ5 1347 aa24.91■■□□□ 1.58
IRF3-216ENST00000597180 ONECUT3O60422 494 aaPredicted RBP24.91■■□□□ 1.58
IRF3-216ENST00000597180 LARP1Q6PKG0 1096 aaKnown RBP24.91■■□□□ 1.58
IRF3-216ENST00000597180 NSD2O96028 1365 aa24.91■■□□□ 1.58
IRF3-216ENST00000597180 MAP2P11137 1827 aaKnown RBP24.91■■□□□ 1.58
IRF3-216ENST00000597180 SOCS7O14512 581 aa24.9■■□□□ 1.58
IRF3-216ENST00000597180 WNK3Q9BYP7 1800 aa24.89■■□□□ 1.58
IRF3-216ENST00000597180 CRB1P82279 1406 aa24.89■■□□□ 1.58
IRF3-216ENST00000597180 MAP3K19Q56UN5 1328 aa24.88■■□□□ 1.57
IRF3-216ENST00000597180 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
IRF3-216ENST00000597180 FAM208AQ9UK61 1670 aaKnown RBP24.88■■□□□ 1.57
IRF3-216ENST00000597180 WDR17Q8IZU2 1322 aa24.87■■□□□ 1.57
IRF3-216ENST00000597180 PEAK1Q9H792 1746 aa24.87■■□□□ 1.57
IRF3-216ENST00000597180 FBLN1P23142 703 aa24.87■■□□□ 1.57
IRF3-216ENST00000597180 KNSTRNQ9Y448 316 aa24.87■■□□□ 1.57
IRF3-216ENST00000597180 RTL1A6NKG5 1358 aa24.87■■□□□ 1.57
IRF3-216ENST00000597180 IP6K1Q92551 441 aa24.86■■□□□ 1.57
IRF3-216ENST00000597180 PER1O15534 1290 aaPredicted RBP24.85■■□□□ 1.57
IRF3-216ENST00000597180 KIF24Q5T7B8 1368 aa24.84■■□□□ 1.57
IRF3-216ENST00000597180 FAM98CQ17RN3 349 aaKnown RBP24.84■■□□□ 1.57
IRF3-216ENST00000597180 BARGINQ6ZT62 677 aa24.84■■□□□ 1.57
IRF3-216ENST00000597180 SEPT12Q8IYM1 358 aa24.84■■□□□ 1.57
IRF3-216ENST00000597180 ERBB3P21860 1342 aa24.84■■□□□ 1.57
IRF3-216ENST00000597180 RRS1Q15050 365 aaKnown RBP24.83■■□□□ 1.57
IRF3-216ENST00000597180 AMER1Q5JTC6 1135 aaPredicted RBP24.83■■□□□ 1.57
IRF3-216ENST00000597180 TCP11L2Q8N4U5 519 aa24.83■■□□□ 1.57
IRF3-216ENST00000597180 THRAP3Q9Y2W1 955 aaKnown RBP24.83■■□□□ 1.57
IRF3-216ENST00000597180 PARP4Q9UKK3 1724 aaKnown RBP24.83■■□□□ 1.57
IRF3-216ENST00000597180 HOXC9P31274 260 aa24.82■■□□□ 1.56
IRF3-216ENST00000597180 TOM1L2Q6ZVM7 507 aa24.82■■□□□ 1.56
IRF3-216ENST00000597180 RGPD2P0DJD1 1756 aa24.81■■□□□ 1.56
IRF3-216ENST00000597180 AMPHP49418 695 aa24.81■■□□□ 1.56
IRF3-216ENST00000597180 USP35Q9P2H5 1018 aa24.81■■□□□ 1.56
IRF3-216ENST00000597180 CSB-PGBD3P0DP91 1061 aa24.8■■□□□ 1.56
IRF3-216ENST00000597180 CARD10Q9BWT7 1032 aa24.8■■□□□ 1.56
IRF3-216ENST00000597180 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
IRF3-216ENST00000597180 FLT4P35916 1363 aa24.79■■□□□ 1.56
IRF3-216ENST00000597180 NPC1L1Q9UHC9 1359 aa24.78■■□□□ 1.56
IRF3-216ENST00000597180 EMILIN1Q9Y6C2 1016 aa24.76■■□□□ 1.55
IRF3-216ENST00000597180 INSRP06213 1382 aa24.76■■□□□ 1.55
IRF3-216ENST00000597180 LRRC37A3O60309 1634 aa24.75■■□□□ 1.55
IRF3-216ENST00000597180 A0A0G2JS52 829 aa24.75■■□□□ 1.55
IRF3-216ENST00000597180 MYT1Q01538 1121 aa24.75■■□□□ 1.55
IRF3-216ENST00000597180 MORC1Q86VD1 984 aa24.75■■□□□ 1.55
IRF3-216ENST00000597180 SMG6Q86US8 1419 aaKnown RBP24.75■■□□□ 1.55
IRF3-216ENST00000597180 KRT27Q7Z3Y8 459 aa24.74■■□□□ 1.55
IRF3-216ENST00000597180 POLKQ9UBT6 870 aa24.74■■□□□ 1.55
IRF3-216ENST00000597180 DISP2A7MBM2 1401 aa24.74■■□□□ 1.55
IRF3-216ENST00000597180 TNNT2P45379 298 aaPredicted RBP24.72■■□□□ 1.55
IRF3-216ENST00000597180 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
IRF3-216ENST00000597180 LTV1Q96GA3 475 aaPredicted RBP24.72■■□□□ 1.55
IRF3-216ENST00000597180 NLRP2Q9NX02 1062 aa24.72■■□□□ 1.55
IRF3-216ENST00000597180 CDCA7Q9BWT1 371 aaPredicted RBP24.71■■□□□ 1.55
IRF3-216ENST00000597180 CC2D1BQ5T0F9 858 aaKnown RBP24.69■■□□□ 1.54
IRF3-216ENST00000597180 PPM1GO15355 546 aaPredicted RBP24.68■■□□□ 1.54
IRF3-216ENST00000597180 UPF1Q92900 1129 aaKnown RBP eCLIP24.68■■□□□ 1.54
IRF3-216ENST00000597180 EP400Q96L91 3159 aa24.66■■□□□ 1.54
IRF3-216ENST00000597180 NCAPD2Q15021 1401 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 TNS2Q63HR2 1409 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 IL2RBP14784 551 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 PDE3BQ13370 1112 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 DDB1Q16531 1140 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 NBPF6Q5VWK0 638 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 NBPF4Q96M43 638 aa24.63■■□□□ 1.53
IRF3-216ENST00000597180 RGPD1P0DJD0 1748 aa24.61■■□□□ 1.53
IRF3-216ENST00000597180 SBF2Q86WG5 1849 aa24.61■■□□□ 1.53
IRF3-216ENST00000597180 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
IRF3-216ENST00000597180 EIF4A2Q14240 407 aaKnown RBP24.59■■□□□ 1.53
IRF3-216ENST00000597180 FAM182BQ5T319 152 aa24.59■■□□□ 1.53
IRF3-216ENST00000597180 MEGF6O75095 1541 aa24.58■■□□□ 1.53
IRF3-216ENST00000597180 EXOC5O00471 708 aa24.58■■□□□ 1.53
IRF3-216ENST00000597180 CCDC125Q86Z20 511 aa24.58■■□□□ 1.53
IRF3-216ENST00000597180 TNS1Q9HBL0 1735 aaKnown RBP24.58■■□□□ 1.52
IRF3-216ENST00000597180 FAM196AQ6ZSG2 479 aa24.57■■□□□ 1.52
IRF3-216ENST00000597180 USHBP1Q8N6Y0 703 aa24.57■■□□□ 1.52
IRF3-216ENST00000597180 OVOS2A0A0G2JMS6 1433 aa24.57■■□□□ 1.52
IRF3-216ENST00000597180 MTHFSP49914 203 aa24.56■■□□□ 1.52
IRF3-216ENST00000597180 DDX10Q13206 875 aaKnown RBP24.56■■□□□ 1.52
IRF3-216ENST00000597180 BCL9O00512 1426 aa24.55■■□□□ 1.52
IRF3-216ENST00000597180 CNGB1Q14028 1251 aaPredicted RBP24.55■■□□□ 1.52
IRF3-216ENST00000597180 EYA1Q99502 592 aa24.55■■□□□ 1.52
IRF3-216ENST00000597180 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
IRF3-216ENST00000597180 MARCH10Q8NA82 808 aaPredicted RBP24.54■■□□□ 1.52
IRF3-216ENST00000597180 IGSF1Q8N6C5 1336 aa24.52■■□□□ 1.52
IRF3-216ENST00000597180 COL3A1P02461 1466 aaPredicted RBP24.51■■□□□ 1.51
IRF3-216ENST00000597180 RAPGEF4Q8WZA2 1011 aa24.51■■□□□ 1.51
IRF3-216ENST00000597180 PARD3Q8TEW0 1356 aa24.51■■□□□ 1.51
IRF3-216ENST00000597180 TATP17735 454 aaPredicted RBP24.49■■□□□ 1.51
IRF3-216ENST00000597180 IL13P35225 146 aa24.49■■□□□ 1.51
IRF3-216ENST00000597180 ZNF316A6NFI3 1004 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms