RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
ZNF548-206ENST00000597047 PPP2R1AP30153 589 aa12.55□□□□□ -0.4
ZNF548-206ENST00000597047 HOXC9P31274 260 aa12.55□□□□□ -0.4
ZNF548-206ENST00000597047 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
ZNF548-206ENST00000597047 IP6K1Q92551 441 aa12.55□□□□□ -0.4
ZNF548-206ENST00000597047 NFAT5O94916 1531 aa12.55□□□□□ -0.4
ZNF548-206ENST00000597047 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
ZNF548-206ENST00000597047 A0A0G2JS52 829 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 MYT1Q01538 1121 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 RALBP1Q15311 655 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 QTRT2Q9H974 415 aaKnown RBP12.54□□□□□ -0.4
ZNF548-206ENST00000597047 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 CPDO75976 1380 aa12.54□□□□□ -0.4
ZNF548-206ENST00000597047 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
ZNF548-206ENST00000597047 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
ZNF548-206ENST00000597047 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-206ENST00000597047 AATKQ6ZMQ8 1374 aa12.53□□□□□ -0.4
ZNF548-206ENST00000597047 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
ZNF548-206ENST00000597047 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-206ENST00000597047 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
ZNF548-206ENST00000597047 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
ZNF548-206ENST00000597047 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
ZNF548-206ENST00000597047 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
ZNF548-206ENST00000597047 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
ZNF548-206ENST00000597047 TRPC5Q9UL62 973 aaPredicted RBP12.51□□□□□ -0.41
ZNF548-206ENST00000597047 FLT4P35916 1363 aa12.51□□□□□ -0.41
ZNF548-206ENST00000597047 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
ZNF548-206ENST00000597047 MYBBP1AQ9BQG0 1328 aaKnown RBP12.5□□□□□ -0.41
ZNF548-206ENST00000597047 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
ZNF548-206ENST00000597047 COL18A1P39060 1754 aa12.5□□□□□ -0.41
ZNF548-206ENST00000597047 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
ZNF548-206ENST00000597047 DIAPH1O60610 1272 aaKnown RBP12.49□□□□□ -0.41
ZNF548-206ENST00000597047 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
ZNF548-206ENST00000597047 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
ZNF548-206ENST00000597047 RGS17Q9UGC6 210 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-206ENST00000597047 SLIT2O94813 1529 aa12.48□□□□□ -0.41
ZNF548-206ENST00000597047 BCL9LQ86UU0 1499 aa12.48□□□□□ -0.41
ZNF548-206ENST00000597047 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
ZNF548-206ENST00000597047 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
ZNF548-206ENST00000597047 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-206ENST00000597047 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 INSRP06213 1382 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 RXRBP28702 533 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 VPS72Q15906 364 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-206ENST00000597047 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 NWD2Q9ULI1 1742 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 LMO7Q8WWI1 1683 aa12.47□□□□□ -0.41
ZNF548-206ENST00000597047 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-206ENST00000597047 ERBB3P21860 1342 aa12.46□□□□□ -0.41
ZNF548-206ENST00000597047 HMOX1P09601 288 aa12.46□□□□□ -0.41
ZNF548-206ENST00000597047 NUDCQ9Y266 331 aa12.46□□□□□ -0.41
ZNF548-206ENST00000597047 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
ZNF548-206ENST00000597047 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-206ENST00000597047 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
ZNF548-206ENST00000597047 MIER1Q8N108 512 aa12.45□□□□□ -0.42
ZNF548-206ENST00000597047 EYA1Q99502 592 aa12.45□□□□□ -0.42
ZNF548-206ENST00000597047 MRS2Q9HD23 443 aa12.45□□□□□ -0.42
ZNF548-206ENST00000597047 CRB1P82279 1406 aa12.45□□□□□ -0.42
ZNF548-206ENST00000597047 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 SPATA31A5Q5VU36 1347 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 SPATA31A7Q8IWB4 1347 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 IL13P35225 146 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
ZNF548-206ENST00000597047 CCDC184Q52MB2 194 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 TCP11L2Q8N4U5 519 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
ZNF548-206ENST00000597047 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-206ENST00000597047 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
ZNF548-206ENST00000597047 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
ZNF548-206ENST00000597047 ATRNO75882 1429 aa12.43□□□□□ -0.42
ZNF548-206ENST00000597047 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-206ENST00000597047 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
ZNF548-206ENST00000597047 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
ZNF548-206ENST00000597047 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
ZNF548-206ENST00000597047 IL2RBP14784 551 aa12.41□□□□□ -0.42
ZNF548-206ENST00000597047 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
ZNF548-206ENST00000597047 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
ZNF548-206ENST00000597047 ABCC6O95255 1503 aa12.41□□□□□ -0.42
ZNF548-206ENST00000597047 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
ZNF548-206ENST00000597047 GLI3P10071 1580 aa12.39□□□□□ -0.43
ZNF548-206ENST00000597047 EXOC5O00471 708 aa12.39□□□□□ -0.43
ZNF548-206ENST00000597047 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
ZNF548-206ENST00000597047 DDB1Q16531 1140 aa12.39□□□□□ -0.43
ZNF548-206ENST00000597047 FAM182BQ5T319 152 aa12.39□□□□□ -0.43
ZNF548-206ENST00000597047 CCDC146Q8IYE0 955 aa12.39□□□□□ -0.43
ZNF548-206ENST00000597047 THRAP3Q9Y2W1 955 aaKnown RBP12.39□□□□□ -0.43
ZNF548-206ENST00000597047 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
ZNF548-206ENST00000597047 NEFMP07197 916 aa12.38□□□□□ -0.43
ZNF548-206ENST00000597047 COL3A1P02461 1466 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-206ENST00000597047 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
ZNF548-206ENST00000597047 PRKAR2BP31323 418 aa12.37□□□□□ -0.43
ZNF548-206ENST00000597047 BARGINQ6ZT62 677 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms