RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 RGPD5Q99666 1765 aa20.64■□□□□ 0.9
IRF3-211ENST00000596644 ABCC6O95255 1503 aa20.64■□□□□ 0.9
IRF3-211ENST00000596644 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
IRF3-211ENST00000596644 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
IRF3-211ENST00000596644 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
IRF3-211ENST00000596644 A0A0G2JS52 829 aa20.62■□□□□ 0.89
IRF3-211ENST00000596644 MYT1Q01538 1121 aa20.62■□□□□ 0.89
IRF3-211ENST00000596644 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
IRF3-211ENST00000596644 SPATA31A1Q5TZJ5 1347 aa20.61■□□□□ 0.89
IRF3-211ENST00000596644 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
IRF3-211ENST00000596644 AXIN2Q9Y2T1 843 aa20.61■□□□□ 0.89
IRF3-211ENST00000596644 WASHC2AQ641Q2 1341 aa20.6■□□□□ 0.89
IRF3-211ENST00000596644 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
IRF3-211ENST00000596644 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
IRF3-211ENST00000596644 ANKRD26Q9UPS8 1709 aa20.6■□□□□ 0.89
IRF3-211ENST00000596644 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
IRF3-211ENST00000596644 CRB1P82279 1406 aa20.59■□□□□ 0.89
IRF3-211ENST00000596644 TOM1L2Q6ZVM7 507 aa20.58■□□□□ 0.89
IRF3-211ENST00000596644 SEPT12Q8IYM1 358 aa20.58■□□□□ 0.89
IRF3-211ENST00000596644 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
IRF3-211ENST00000596644 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
IRF3-211ENST00000596644 WDR17Q8IZU2 1322 aa20.57■□□□□ 0.88
IRF3-211ENST00000596644 FBLN1P23142 703 aa20.57■□□□□ 0.88
IRF3-211ENST00000596644 AMPHP49418 695 aa20.57■□□□□ 0.88
IRF3-211ENST00000596644 BRWD3Q6RI45 1802 aa20.57■□□□□ 0.88
IRF3-211ENST00000596644 ONECUT3O60422 494 aaPredicted RBP20.56■□□□□ 0.88
IRF3-211ENST00000596644 TCP11L2Q8N4U5 519 aa20.56■□□□□ 0.88
IRF3-211ENST00000596644 THSD7AQ9UPZ6 1657 aa20.55■□□□□ 0.88
IRF3-211ENST00000596644 BLMP54132 1417 aaPredicted RBP20.55■□□□□ 0.88
IRF3-211ENST00000596644 RRS1Q15050 365 aaKnown RBP20.55■□□□□ 0.88
IRF3-211ENST00000596644 NSD2O96028 1365 aa20.55■□□□□ 0.88
IRF3-211ENST00000596644 IP6K1Q92551 441 aa20.54■□□□□ 0.88
IRF3-211ENST00000596644 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
IRF3-211ENST00000596644 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
IRF3-211ENST00000596644 THRAP3Q9Y2W1 955 aaKnown RBP20.53■□□□□ 0.88
IRF3-211ENST00000596644 ERBB3P21860 1342 aa20.53■□□□□ 0.88
IRF3-211ENST00000596644 HOXC9P31274 260 aa20.52■□□□□ 0.88
IRF3-211ENST00000596644 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.88
IRF3-211ENST00000596644 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
IRF3-211ENST00000596644 FAM208AQ9UK61 1670 aaKnown RBP20.51■□□□□ 0.87
IRF3-211ENST00000596644 WNK3Q9BYP7 1800 aa20.5■□□□□ 0.87
IRF3-211ENST00000596644 TNNT2P45379 298 aaPredicted RBP20.5■□□□□ 0.87
IRF3-211ENST00000596644 KRT27Q7Z3Y8 459 aa20.5■□□□□ 0.87
IRF3-211ENST00000596644 CARD10Q9BWT7 1032 aa20.5■□□□□ 0.87
IRF3-211ENST00000596644 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
IRF3-211ENST00000596644 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
IRF3-211ENST00000596644 PEAK1Q9H792 1746 aa20.5■□□□□ 0.87
IRF3-211ENST00000596644 MORC1Q86VD1 984 aa20.49■□□□□ 0.87
IRF3-211ENST00000596644 FLT4P35916 1363 aa20.48■□□□□ 0.87
IRF3-211ENST00000596644 KIF24Q5T7B8 1368 aa20.48■□□□□ 0.87
IRF3-211ENST00000596644 PPM1GO15355 546 aaPredicted RBP20.48■□□□□ 0.87
IRF3-211ENST00000596644 EMILIN1Q9Y6C2 1016 aa20.48■□□□□ 0.87
IRF3-211ENST00000596644 PARP4Q9UKK3 1724 aaKnown RBP20.47■□□□□ 0.87
IRF3-211ENST00000596644 SMG6Q86US8 1419 aaKnown RBP20.47■□□□□ 0.87
IRF3-211ENST00000596644 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
IRF3-211ENST00000596644 PER1O15534 1290 aaPredicted RBP20.45■□□□□ 0.86
IRF3-211ENST00000596644 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
IRF3-211ENST00000596644 INSRP06213 1382 aa20.45■□□□□ 0.86
IRF3-211ENST00000596644 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
IRF3-211ENST00000596644 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
IRF3-211ENST00000596644 CDCA7Q9BWT1 371 aaPredicted RBP20.44■□□□□ 0.86
IRF3-211ENST00000596644 LRRC37A3O60309 1634 aa20.44■□□□□ 0.86
IRF3-211ENST00000596644 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
IRF3-211ENST00000596644 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
IRF3-211ENST00000596644 POLKQ9UBT6 870 aa20.43■□□□□ 0.86
IRF3-211ENST00000596644 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
IRF3-211ENST00000596644 DDB1Q16531 1140 aa20.41■□□□□ 0.86
IRF3-211ENST00000596644 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
IRF3-211ENST00000596644 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
IRF3-211ENST00000596644 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
IRF3-211ENST00000596644 IL2RBP14784 551 aa20.39■□□□□ 0.85
IRF3-211ENST00000596644 NBPF6Q5VWK0 638 aa20.37■□□□□ 0.85
IRF3-211ENST00000596644 NBPF4Q96M43 638 aa20.37■□□□□ 0.85
IRF3-211ENST00000596644 EXOC5O00471 708 aa20.36■□□□□ 0.85
IRF3-211ENST00000596644 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
IRF3-211ENST00000596644 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
IRF3-211ENST00000596644 FAM196AQ6ZSG2 479 aa20.35■□□□□ 0.85
IRF3-211ENST00000596644 CCDC125Q86Z20 511 aa20.35■□□□□ 0.85
IRF3-211ENST00000596644 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
IRF3-211ENST00000596644 OVOS2A0A0G2JMS6 1433 aa20.34■□□□□ 0.85
IRF3-211ENST00000596644 RGPD1P0DJD0 1748 aa20.33■□□□□ 0.85
IRF3-211ENST00000596644 EIF4A2Q14240 407 aaKnown RBP20.32■□□□□ 0.84
IRF3-211ENST00000596644 EP400Q96L91 3159 aa20.32■□□□□ 0.84
IRF3-211ENST00000596644 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
IRF3-211ENST00000596644 MEGF6O75095 1541 aa20.31■□□□□ 0.84
IRF3-211ENST00000596644 MTHFSP49914 203 aa20.3■□□□□ 0.84
IRF3-211ENST00000596644 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
IRF3-211ENST00000596644 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
IRF3-211ENST00000596644 TATP17735 454 aaPredicted RBP20.29■□□□□ 0.84
IRF3-211ENST00000596644 EYA1Q99502 592 aa20.29■□□□□ 0.84
IRF3-211ENST00000596644 TNS1Q9HBL0 1735 aaKnown RBP20.28■□□□□ 0.84
IRF3-211ENST00000596644 TRIM37O94972 964 aa20.28■□□□□ 0.84
IRF3-211ENST00000596644 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
IRF3-211ENST00000596644 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
IRF3-211ENST00000596644 ZCRB1Q8TBF4 217 aaKnown RBP20.26■□□□□ 0.83
IRF3-211ENST00000596644 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
IRF3-211ENST00000596644 BAG6P46379 1132 aa20.25■□□□□ 0.83
IRF3-211ENST00000596644 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
IRF3-211ENST00000596644 BCL9O00512 1426 aa20.24■□□□□ 0.83
IRF3-211ENST00000596644 IGSF1Q8N6C5 1336 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms