RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
USHBP1-206ENST00000596436 BCL9O00512 1426 aa22.74■■□□□ 1.23
USHBP1-206ENST00000596436 AXIN2Q9Y2T1 843 aa22.72■■□□□ 1.23
USHBP1-206ENST00000596436 WDR17Q8IZU2 1322 aa22.72■■□□□ 1.23
USHBP1-206ENST00000596436 NFAT5O94916 1531 aa22.72■■□□□ 1.23
USHBP1-206ENST00000596436 NBPF14Q5TI25 921 aa22.71■■□□□ 1.23
USHBP1-206ENST00000596436 ARHGEF25Q86VW2 580 aa22.71■■□□□ 1.23
USHBP1-206ENST00000596436 ABCC6O95255 1503 aa22.71■■□□□ 1.23
USHBP1-206ENST00000596436 RGPD5Q99666 1765 aa22.71■■□□□ 1.23
USHBP1-206ENST00000596436 PLSCR1O15162 318 aa22.7■■□□□ 1.22
USHBP1-206ENST00000596436 CCER1Q8TC90 406 aaPredicted RBP22.7■■□□□ 1.22
USHBP1-206ENST00000596436 ZNF692Q9BU19 519 aaPredicted RBP22.7■■□□□ 1.22
USHBP1-206ENST00000596436 TTC21BQ7Z4L5 1316 aa22.7■■□□□ 1.22
USHBP1-206ENST00000596436 USP54Q70EL1 1684 aa22.7■■□□□ 1.22
USHBP1-206ENST00000596436 MON2Q7Z3U7 1717 aa22.69■■□□□ 1.22
USHBP1-206ENST00000596436 DDB1Q16531 1140 aa22.69■■□□□ 1.22
USHBP1-206ENST00000596436 TTC21AQ8NDW8 1320 aa22.68■■□□□ 1.22
USHBP1-206ENST00000596436 SBNO2Q9Y2G9 1366 aa22.67■■□□□ 1.22
USHBP1-206ENST00000596436 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
USHBP1-206ENST00000596436 KCNH5Q8NCM2 988 aa22.67■■□□□ 1.22
USHBP1-206ENST00000596436 CDCA7Q9BWT1 371 aaPredicted RBP22.67■■□□□ 1.22
USHBP1-206ENST00000596436 CASZ1Q86V15 1759 aa22.67■■□□□ 1.22
USHBP1-206ENST00000596436 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
USHBP1-206ENST00000596436 ZBTB7CA1YPR0 619 aa22.65■■□□□ 1.22
USHBP1-206ENST00000596436 MARCH10Q8NA82 808 aaPredicted RBP22.65■■□□□ 1.22
USHBP1-206ENST00000596436 BCL11BQ9C0K0 894 aaPredicted RBP22.65■■□□□ 1.22
USHBP1-206ENST00000596436 CARD10Q9BWT7 1032 aa22.64■■□□□ 1.21
USHBP1-206ENST00000596436 PTF1AQ7RTS3 328 aa22.63■■□□□ 1.21
USHBP1-206ENST00000596436 KCNQ2O43526 872 aa22.62■■□□□ 1.21
USHBP1-206ENST00000596436 SPON1Q9HCB6 807 aa22.62■■□□□ 1.21
USHBP1-206ENST00000596436 USP31Q70CQ4 1352 aa22.62■■□□□ 1.21
USHBP1-206ENST00000596436 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
USHBP1-206ENST00000596436 CD163L1Q9NR16 1453 aa22.61■■□□□ 1.21
USHBP1-206ENST00000596436 ANO8Q9HCE9 1232 aaPredicted RBP22.61■■□□□ 1.21
USHBP1-206ENST00000596436 PROM2Q8N271 834 aa22.6■■□□□ 1.21
USHBP1-206ENST00000596436 CCDC7Q96M83 1385 aa22.6■■□□□ 1.21
USHBP1-206ENST00000596436 NINLQ9Y2I6 1382 aa22.6■■□□□ 1.21
USHBP1-206ENST00000596436 TNS2Q63HR2 1409 aa22.58■■□□□ 1.21
USHBP1-206ENST00000596436 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
USHBP1-206ENST00000596436 NHSQ6T4R5 1651 aa22.57■■□□□ 1.2
USHBP1-206ENST00000596436 LTN1O94822 1766 aa22.55■■□□□ 1.2
USHBP1-206ENST00000596436 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
USHBP1-206ENST00000596436 EXOC5O00471 708 aa22.53■■□□□ 1.2
USHBP1-206ENST00000596436 SOX12O15370 315 aa22.53■■□□□ 1.2
USHBP1-206ENST00000596436 CSB-PGBD3P0DP91 1061 aa22.53■■□□□ 1.2
USHBP1-206ENST00000596436 ERBB3P21860 1342 aa22.53■■□□□ 1.2
USHBP1-206ENST00000596436 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
USHBP1-206ENST00000596436 PAPPAQ13219 1627 aa22.51■■□□□ 1.19
USHBP1-206ENST00000596436 TXNRD1Q16881 649 aa22.51■■□□□ 1.19
USHBP1-206ENST00000596436 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
USHBP1-206ENST00000596436 EDC4Q6P2E9 1401 aaKnown RBP22.5■■□□□ 1.19
USHBP1-206ENST00000596436 MYOM1P52179 1685 aa22.5■■□□□ 1.19
USHBP1-206ENST00000596436 NME9Q86XW9 330 aa22.49■■□□□ 1.19
USHBP1-206ENST00000596436 PTGER2P43116 358 aa22.48■■□□□ 1.19
USHBP1-206ENST00000596436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
USHBP1-206ENST00000596436 YY1P25490 414 aa22.47■■□□□ 1.19
USHBP1-206ENST00000596436 PUS7Q96PZ0 661 aaKnown RBP22.47■■□□□ 1.19
USHBP1-206ENST00000596436 SLC15A2Q16348 729 aa22.46■■□□□ 1.19
USHBP1-206ENST00000596436 BTAF1O14981 1849 aa22.45■■□□□ 1.19
USHBP1-206ENST00000596436 A0A1W2PP64 1363 aa22.45■■□□□ 1.18
USHBP1-206ENST00000596436 FAM208AQ9UK61 1670 aaKnown RBP22.45■■□□□ 1.18
USHBP1-206ENST00000596436 IL2RBP14784 551 aa22.44■■□□□ 1.18
USHBP1-206ENST00000596436 SLC12A5Q9H2X9 1139 aa22.44■■□□□ 1.18
USHBP1-206ENST00000596436 STK32BQ9NY57 414 aa22.44■■□□□ 1.18
USHBP1-206ENST00000596436 ZBTB7AO95365 584 aa22.43■■□□□ 1.18
USHBP1-206ENST00000596436 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
USHBP1-206ENST00000596436 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
USHBP1-206ENST00000596436 SGIP1Q9BQI5 828 aa22.42■■□□□ 1.18
USHBP1-206ENST00000596436 NLRP2Q9NX02 1062 aa22.42■■□□□ 1.18
USHBP1-206ENST00000596436 UTRNP46939 3433 aa22.42■■□□□ 1.18
USHBP1-206ENST00000596436 USP47Q96K76 1375 aa22.4■■□□□ 1.18
USHBP1-206ENST00000596436 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
USHBP1-206ENST00000596436 TERF2IPQ9NYB0 399 aa22.4■■□□□ 1.18
USHBP1-206ENST00000596436 MTFR1LQ9H019 292 aa22.39■■□□□ 1.17
USHBP1-206ENST00000596436 QSER1Q2KHR3 1735 aa22.38■■□□□ 1.17
USHBP1-206ENST00000596436 DCAF8L1A6NGE4 600 aa22.38■■□□□ 1.17
USHBP1-206ENST00000596436 ACSBG1Q96GR2 724 aa22.38■■□□□ 1.17
USHBP1-206ENST00000596436 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
USHBP1-206ENST00000596436 IP6K1Q92551 441 aa22.37■■□□□ 1.17
USHBP1-206ENST00000596436 TESK2Q96S53 571 aa22.37■■□□□ 1.17
USHBP1-206ENST00000596436 ATF5Q9Y2D1 282 aaPredicted RBP22.37■■□□□ 1.17
USHBP1-206ENST00000596436 COL24A1Q17RW2 1714 aa22.36■■□□□ 1.17
USHBP1-206ENST00000596436 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
USHBP1-206ENST00000596436 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
USHBP1-206ENST00000596436 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
USHBP1-206ENST00000596436 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.17
USHBP1-206ENST00000596436 LRRC4BQ9NT99 713 aa22.33■■□□□ 1.17
USHBP1-206ENST00000596436 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
USHBP1-206ENST00000596436 LY75O60449 1722 aa22.31■■□□□ 1.16
USHBP1-206ENST00000596436 DOT1LQ8TEK3 1739 aa22.3■■□□□ 1.16
USHBP1-206ENST00000596436 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
USHBP1-206ENST00000596436 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
USHBP1-206ENST00000596436 AKT1S1Q96B36 256 aa22.29■■□□□ 1.16
USHBP1-206ENST00000596436 NSD2O96028 1365 aa22.28■■□□□ 1.16
USHBP1-206ENST00000596436 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
USHBP1-206ENST00000596436 HOXC9P31274 260 aa22.28■■□□□ 1.16
USHBP1-206ENST00000596436 SLC27A3Q5K4L6 730 aa22.28■■□□□ 1.16
USHBP1-206ENST00000596436 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
USHBP1-206ENST00000596436 RTL1A6NKG5 1358 aa22.27■■□□□ 1.16
USHBP1-206ENST00000596436 ANKRD36BQ8N2N9 1353 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms