RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CRB1P82279 1406 aa18.24■□□□□ 0.51
USE1-207ENST00000596136 TCP11L2Q8N4U5 519 aa18.24■□□□□ 0.51
USE1-207ENST00000596136 BLMP54132 1417 aaPredicted RBP18.23■□□□□ 0.51
USE1-207ENST00000596136 A0A0G2JS52 829 aa18.22■□□□□ 0.51
USE1-207ENST00000596136 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
USE1-207ENST00000596136 MYT1Q01538 1121 aa18.22■□□□□ 0.51
USE1-207ENST00000596136 USP35Q9P2H5 1018 aa18.22■□□□□ 0.51
USE1-207ENST00000596136 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
USE1-207ENST00000596136 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
USE1-207ENST00000596136 SOX12O15370 315 aa18.21■□□□□ 0.51
USE1-207ENST00000596136 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
USE1-207ENST00000596136 MYOM1P52179 1685 aa18.2■□□□□ 0.5
USE1-207ENST00000596136 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
USE1-207ENST00000596136 LTN1O94822 1766 aa18.18■□□□□ 0.5
USE1-207ENST00000596136 FYB1O15117 783 aa18.18■□□□□ 0.5
USE1-207ENST00000596136 COG3Q96JB2 828 aa18.18■□□□□ 0.5
USE1-207ENST00000596136 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
USE1-207ENST00000596136 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
USE1-207ENST00000596136 TOM1L2Q6ZVM7 507 aa18.17■□□□□ 0.5
USE1-207ENST00000596136 CARD14Q9BXL6 1004 aa18.17■□□□□ 0.5
USE1-207ENST00000596136 FAM182BQ5T319 152 aa18.15■□□□□ 0.5
USE1-207ENST00000596136 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
USE1-207ENST00000596136 CDCA7Q9BWT1 371 aaPredicted RBP18.15■□□□□ 0.5
USE1-207ENST00000596136 ERBB3P21860 1342 aa18.15■□□□□ 0.5
USE1-207ENST00000596136 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
USE1-207ENST00000596136 IP6K1Q92551 441 aa18.14■□□□□ 0.49
USE1-207ENST00000596136 SF3B2Q13435 895 aaKnown RBP18.13■□□□□ 0.49
USE1-207ENST00000596136 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
USE1-207ENST00000596136 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
USE1-207ENST00000596136 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
USE1-207ENST00000596136 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
USE1-207ENST00000596136 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
USE1-207ENST00000596136 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
USE1-207ENST00000596136 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
USE1-207ENST00000596136 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
USE1-207ENST00000596136 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
USE1-207ENST00000596136 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
USE1-207ENST00000596136 KIF20BQ96Q89 1820 aa18.1■□□□□ 0.49
USE1-207ENST00000596136 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
USE1-207ENST00000596136 FBLN1P23142 703 aa18.1■□□□□ 0.49
USE1-207ENST00000596136 LRRC37A3O60309 1634 aa18.09■□□□□ 0.49
USE1-207ENST00000596136 DDB1Q16531 1140 aa18.09■□□□□ 0.49
USE1-207ENST00000596136 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
USE1-207ENST00000596136 HOXC9P31274 260 aa18.08■□□□□ 0.48
USE1-207ENST00000596136 BAG6P46379 1132 aa18.08■□□□□ 0.48
USE1-207ENST00000596136 TNS1Q9HBL0 1735 aaKnown RBP18.08■□□□□ 0.48
USE1-207ENST00000596136 BCL9O00512 1426 aa18.07■□□□□ 0.48
USE1-207ENST00000596136 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
USE1-207ENST00000596136 NLRP2Q9NX02 1062 aa18.07■□□□□ 0.48
USE1-207ENST00000596136 TRIM37O94972 964 aa18.06■□□□□ 0.48
USE1-207ENST00000596136 OVOS2A0A0G2JMS6 1433 aa18.06■□□□□ 0.48
USE1-207ENST00000596136 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
USE1-207ENST00000596136 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
USE1-207ENST00000596136 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
USE1-207ENST00000596136 EXOC5O00471 708 aa18.05■□□□□ 0.48
USE1-207ENST00000596136 AMPHP49418 695 aa18.05■□□□□ 0.48
USE1-207ENST00000596136 MARCH10Q8NA82 808 aaPredicted RBP18.05■□□□□ 0.48
USE1-207ENST00000596136 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
USE1-207ENST00000596136 SBF2Q86WG5 1849 aa18.03■□□□□ 0.48
USE1-207ENST00000596136 IL2RBP14784 551 aa18.03■□□□□ 0.48
USE1-207ENST00000596136 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
USE1-207ENST00000596136 CAMKK2Q96RR4 588 aa18.03■□□□□ 0.48
USE1-207ENST00000596136 POLR3GLQ9BT43 218 aa18.03■□□□□ 0.48
USE1-207ENST00000596136 PANK3Q9H999 370 aa18.03■□□□□ 0.48
USE1-207ENST00000596136 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
USE1-207ENST00000596136 INSRP06213 1382 aa18.02■□□□□ 0.47
USE1-207ENST00000596136 FLT4P35916 1363 aa18.01■□□□□ 0.47
USE1-207ENST00000596136 PARD3Q8TEW0 1356 aa18.01■□□□□ 0.47
USE1-207ENST00000596136 APBA3O96018 575 aa18■□□□□ 0.47
USE1-207ENST00000596136 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
USE1-207ENST00000596136 KIF7Q2M1P5 1343 aa17.99■□□□□ 0.47
USE1-207ENST00000596136 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
USE1-207ENST00000596136 ANKRD26Q9UPS8 1709 aa17.98■□□□□ 0.47
USE1-207ENST00000596136 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
USE1-207ENST00000596136 BCL11BQ9C0K0 894 aaPredicted RBP17.98■□□□□ 0.47
USE1-207ENST00000596136 RGPD2P0DJD1 1756 aa17.98■□□□□ 0.47
USE1-207ENST00000596136 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
USE1-207ENST00000596136 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
USE1-207ENST00000596136 NSD2O96028 1365 aa17.97■□□□□ 0.47
USE1-207ENST00000596136 PLSCR1O15162 318 aa17.97■□□□□ 0.47
USE1-207ENST00000596136 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
USE1-207ENST00000596136 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
USE1-207ENST00000596136 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
USE1-207ENST00000596136 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.46
USE1-207ENST00000596136 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
USE1-207ENST00000596136 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
USE1-207ENST00000596136 RREB1Q92766 1687 aa17.94■□□□□ 0.46
USE1-207ENST00000596136 PTF1AQ7RTS3 328 aa17.94■□□□□ 0.46
USE1-207ENST00000596136 RGPD3A6NKT7 1758 aaPredicted RBP17.94■□□□□ 0.46
USE1-207ENST00000596136 RGPD4Q7Z3J3 1758 aa17.94■□□□□ 0.46
USE1-207ENST00000596136 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
USE1-207ENST00000596136 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
USE1-207ENST00000596136 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
USE1-207ENST00000596136 MEGF6O75095 1541 aa17.92■□□□□ 0.46
USE1-207ENST00000596136 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
USE1-207ENST00000596136 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
USE1-207ENST00000596136 NHSQ6T4R5 1651 aa17.9■□□□□ 0.46
USE1-207ENST00000596136 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.46
USE1-207ENST00000596136 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.46
USE1-207ENST00000596136 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms