RNA–Protein interactions for RNA: ENST00000595495.1

SIPA1L3-205, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 584 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-205ENST00000595495 STRN4Q9NRL3 753 aa19.77■□□□□ 0.76
SIPA1L3-205ENST00000595495 CCDC9Q9Y3X0 531 aaKnown RBP19.77■□□□□ 0.76
SIPA1L3-205ENST00000595495 SPATA31A5Q5VU36 1347 aa19.75■□□□□ 0.75
SIPA1L3-205ENST00000595495 SPATA31A7Q8IWB4 1347 aa19.75■□□□□ 0.75
SIPA1L3-205ENST00000595495 NSD2O96028 1365 aa19.74■□□□□ 0.75
SIPA1L3-205ENST00000595495 EVA1CP58658 441 aa19.74■□□□□ 0.75
SIPA1L3-205ENST00000595495 AXIN2Q9Y2T1 843 aa19.74■□□□□ 0.75
SIPA1L3-205ENST00000595495 LTN1O94822 1766 aa19.74■□□□□ 0.75
SIPA1L3-205ENST00000595495 LARP1Q6PKG0 1096 aaKnown RBP19.73■□□□□ 0.75
SIPA1L3-205ENST00000595495 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
SIPA1L3-205ENST00000595495 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
SIPA1L3-205ENST00000595495 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
SIPA1L3-205ENST00000595495 ANKRD26Q9UPS8 1709 aa19.71■□□□□ 0.75
SIPA1L3-205ENST00000595495 CRB1P82279 1406 aa19.71■□□□□ 0.75
SIPA1L3-205ENST00000595495 FBLN1P23142 703 aa19.71■□□□□ 0.75
SIPA1L3-205ENST00000595495 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
SIPA1L3-205ENST00000595495 BLMP54132 1417 aaPredicted RBP19.7■□□□□ 0.74
SIPA1L3-205ENST00000595495 WDR17Q8IZU2 1322 aa19.7■□□□□ 0.74
SIPA1L3-205ENST00000595495 RRS1Q15050 365 aaKnown RBP19.69■□□□□ 0.74
SIPA1L3-205ENST00000595495 IP6K1Q92551 441 aa19.69■□□□□ 0.74
SIPA1L3-205ENST00000595495 ERBB3P21860 1342 aa19.69■□□□□ 0.74
SIPA1L3-205ENST00000595495 PER1O15534 1290 aaPredicted RBP19.68■□□□□ 0.74
SIPA1L3-205ENST00000595495 ONECUT3O60422 494 aaPredicted RBP19.68■□□□□ 0.74
SIPA1L3-205ENST00000595495 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
SIPA1L3-205ENST00000595495 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
SIPA1L3-205ENST00000595495 RGPD5Q99666 1765 aa19.67■□□□□ 0.74
SIPA1L3-205ENST00000595495 AMPHP49418 695 aa19.67■□□□□ 0.74
SIPA1L3-205ENST00000595495 USP35Q9P2H5 1018 aa19.67■□□□□ 0.74
SIPA1L3-205ENST00000595495 THSD7AQ9UPZ6 1657 aa19.67■□□□□ 0.74
SIPA1L3-205ENST00000595495 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
SIPA1L3-205ENST00000595495 CSB-PGBD3P0DP91 1061 aa19.66■□□□□ 0.74
SIPA1L3-205ENST00000595495 HOXC9P31274 260 aa19.66■□□□□ 0.74
SIPA1L3-205ENST00000595495 TOM1L2Q6ZVM7 507 aa19.66■□□□□ 0.74
SIPA1L3-205ENST00000595495 SEPT12Q8IYM1 358 aa19.66■□□□□ 0.74
SIPA1L3-205ENST00000595495 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
SIPA1L3-205ENST00000595495 BARGINQ6ZT62 677 aa19.65■□□□□ 0.74
SIPA1L3-205ENST00000595495 ANKRD24Q8TF21 1146 aa19.65■□□□□ 0.74
SIPA1L3-205ENST00000595495 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
SIPA1L3-205ENST00000595495 A0A0G2JS52 829 aa19.64■□□□□ 0.73
SIPA1L3-205ENST00000595495 MYT1Q01538 1121 aa19.64■□□□□ 0.73
SIPA1L3-205ENST00000595495 FLT4P35916 1363 aa19.64■□□□□ 0.73
SIPA1L3-205ENST00000595495 PEAK1Q9H792 1746 aa19.64■□□□□ 0.73
SIPA1L3-205ENST00000595495 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
SIPA1L3-205ENST00000595495 MORC1Q86VD1 984 aa19.63■□□□□ 0.73
SIPA1L3-205ENST00000595495 CARD10Q9BWT7 1032 aa19.63■□□□□ 0.73
SIPA1L3-205ENST00000595495 EMILIN1Q9Y6C2 1016 aa19.63■□□□□ 0.73
SIPA1L3-205ENST00000595495 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
SIPA1L3-205ENST00000595495 INSRP06213 1382 aa19.61■□□□□ 0.73
SIPA1L3-205ENST00000595495 SMG6Q86US8 1419 aaKnown RBP19.6■□□□□ 0.73
SIPA1L3-205ENST00000595495 FAM208AQ9UK61 1670 aaKnown RBP19.6■□□□□ 0.73
SIPA1L3-205ENST00000595495 LTV1Q96GA3 475 aaPredicted RBP19.6■□□□□ 0.73
SIPA1L3-205ENST00000595495 NLRP2Q9NX02 1062 aa19.6■□□□□ 0.73
SIPA1L3-205ENST00000595495 POLKQ9UBT6 870 aa19.6■□□□□ 0.73
SIPA1L3-205ENST00000595495 HSP90AB2PQ58FF8 381 aa19.59■□□□□ 0.73
SIPA1L3-205ENST00000595495 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
SIPA1L3-205ENST00000595495 BRWD3Q6RI45 1802 aa19.58■□□□□ 0.73
SIPA1L3-205ENST00000595495 PPM1GO15355 546 aaPredicted RBP19.58■□□□□ 0.72
SIPA1L3-205ENST00000595495 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
SIPA1L3-205ENST00000595495 KRT27Q7Z3Y8 459 aa19.57■□□□□ 0.72
SIPA1L3-205ENST00000595495 WNK3Q9BYP7 1800 aa19.57■□□□□ 0.72
SIPA1L3-205ENST00000595495 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
SIPA1L3-205ENST00000595495 LRRC37A3O60309 1634 aa19.55■□□□□ 0.72
SIPA1L3-205ENST00000595495 CDCA7Q9BWT1 371 aaPredicted RBP19.55■□□□□ 0.72
SIPA1L3-205ENST00000595495 MAP2P11137 1827 aaKnown RBP19.55■□□□□ 0.72
SIPA1L3-205ENST00000595495 EP400Q96L91 3159 aa19.54■□□□□ 0.72
SIPA1L3-205ENST00000595495 IL2RBP14784 551 aa19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 NBPF6Q5VWK0 638 aa19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 UPF1Q92900 1129 aaKnown RBP eCLIP19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 NBPF4Q96M43 638 aa19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 TNS2Q63HR2 1409 aa19.51■□□□□ 0.71
SIPA1L3-205ENST00000595495 DDB1Q16531 1140 aa19.5■□□□□ 0.71
SIPA1L3-205ENST00000595495 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
SIPA1L3-205ENST00000595495 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
SIPA1L3-205ENST00000595495 NCAPD2Q15021 1401 aa19.49■□□□□ 0.71
SIPA1L3-205ENST00000595495 EIF4A2Q14240 407 aaKnown RBP19.48■□□□□ 0.71
SIPA1L3-205ENST00000595495 FAM182BQ5T319 152 aa19.48■□□□□ 0.71
SIPA1L3-205ENST00000595495 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
SIPA1L3-205ENST00000595495 MEGF6O75095 1541 aa19.47■□□□□ 0.71
SIPA1L3-205ENST00000595495 MTHFSP49914 203 aa19.47■□□□□ 0.71
SIPA1L3-205ENST00000595495 OVOS2A0A0G2JMS6 1433 aa19.45■□□□□ 0.7
SIPA1L3-205ENST00000595495 EXOC5O00471 708 aa19.45■□□□□ 0.7
SIPA1L3-205ENST00000595495 EYA1Q99502 592 aa19.45■□□□□ 0.7
SIPA1L3-205ENST00000595495 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
SIPA1L3-205ENST00000595495 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
SIPA1L3-205ENST00000595495 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
SIPA1L3-205ENST00000595495 MARCH10Q8NA82 808 aaPredicted RBP19.43■□□□□ 0.7
SIPA1L3-205ENST00000595495 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
SIPA1L3-205ENST00000595495 IGSF1Q8N6C5 1336 aa19.43■□□□□ 0.7
SIPA1L3-205ENST00000595495 CCDC125Q86Z20 511 aa19.42■□□□□ 0.7
SIPA1L3-205ENST00000595495 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
SIPA1L3-205ENST00000595495 BCL9O00512 1426 aa19.41■□□□□ 0.7
SIPA1L3-205ENST00000595495 TATP17735 454 aaPredicted RBP19.4■□□□□ 0.7
SIPA1L3-205ENST00000595495 PPP2R1AP30153 589 aa19.4■□□□□ 0.7
SIPA1L3-205ENST00000595495 IL13P35225 146 aa19.4■□□□□ 0.7
SIPA1L3-205ENST00000595495 RGPD1P0DJD0 1748 aa19.39■□□□□ 0.7
SIPA1L3-205ENST00000595495 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
SIPA1L3-205ENST00000595495 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
SIPA1L3-205ENST00000595495 SHANK3Q9BYB0 1731 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms