RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
SIN3B-204ENST00000594372 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
SIN3B-204ENST00000594372 KCNQ2O43526 872 aa17.76■□□□□ 0.43
SIN3B-204ENST00000594372 SPON1Q9HCB6 807 aa17.76■□□□□ 0.43
SIN3B-204ENST00000594372 THRAP3Q9Y2W1 955 aaKnown RBP17.76■□□□□ 0.43
SIN3B-204ENST00000594372 DDB1Q16531 1140 aa17.74■□□□□ 0.43
SIN3B-204ENST00000594372 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
SIN3B-204ENST00000594372 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
SIN3B-204ENST00000594372 LTN1O94822 1766 aa17.74■□□□□ 0.43
SIN3B-204ENST00000594372 ZBTB7AO95365 584 aa17.73■□□□□ 0.43
SIN3B-204ENST00000594372 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
SIN3B-204ENST00000594372 PROM2Q8N271 834 aa17.72■□□□□ 0.43
SIN3B-204ENST00000594372 UTRNP46939 3433 aa17.72■□□□□ 0.43
SIN3B-204ENST00000594372 BCL11BQ9C0K0 894 aaPredicted RBP17.71■□□□□ 0.43
SIN3B-204ENST00000594372 MON2Q7Z3U7 1717 aa17.71■□□□□ 0.43
SIN3B-204ENST00000594372 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
SIN3B-204ENST00000594372 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
SIN3B-204ENST00000594372 NFAT5O94916 1531 aa17.7■□□□□ 0.42
SIN3B-204ENST00000594372 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
SIN3B-204ENST00000594372 L3MBTL2Q969R5 705 aa17.69■□□□□ 0.42
SIN3B-204ENST00000594372 BTAF1O14981 1849 aa17.69■□□□□ 0.42
SIN3B-204ENST00000594372 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
SIN3B-204ENST00000594372 NHSQ6T4R5 1651 aa17.68■□□□□ 0.42
SIN3B-204ENST00000594372 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
SIN3B-204ENST00000594372 CHD4Q14839 1912 aa17.68■□□□□ 0.42
SIN3B-204ENST00000594372 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
SIN3B-204ENST00000594372 PLSCR1O15162 318 aa17.67■□□□□ 0.42
SIN3B-204ENST00000594372 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
SIN3B-204ENST00000594372 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
SIN3B-204ENST00000594372 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
SIN3B-204ENST00000594372 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
SIN3B-204ENST00000594372 TUBGCP6Q96RT7 1819 aa17.64■□□□□ 0.41
SIN3B-204ENST00000594372 PTGER2P43116 358 aa17.64■□□□□ 0.41
SIN3B-204ENST00000594372 TXNRD1Q16881 649 aa17.64■□□□□ 0.41
SIN3B-204ENST00000594372 RGPD2P0DJD1 1756 aa17.63■□□□□ 0.41
SIN3B-204ENST00000594372 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
SIN3B-204ENST00000594372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.41
SIN3B-204ENST00000594372 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
SIN3B-204ENST00000594372 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
SIN3B-204ENST00000594372 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
SIN3B-204ENST00000594372 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
SIN3B-204ENST00000594372 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
SIN3B-204ENST00000594372 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
SIN3B-204ENST00000594372 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
SIN3B-204ENST00000594372 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
SIN3B-204ENST00000594372 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
SIN3B-204ENST00000594372 EXOC5O00471 708 aa17.6■□□□□ 0.41
SIN3B-204ENST00000594372 NME9Q86XW9 330 aa17.6■□□□□ 0.41
SIN3B-204ENST00000594372 SLC15A2Q16348 729 aa17.59■□□□□ 0.41
SIN3B-204ENST00000594372 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
SIN3B-204ENST00000594372 FHDC1Q9C0D6 1143 aaPredicted RBP17.59■□□□□ 0.41
SIN3B-204ENST00000594372 ABCC6O95255 1503 aa17.58■□□□□ 0.41
SIN3B-204ENST00000594372 BCL9O00512 1426 aa17.58■□□□□ 0.41
SIN3B-204ENST00000594372 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
SIN3B-204ENST00000594372 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.4
SIN3B-204ENST00000594372 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
SIN3B-204ENST00000594372 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
SIN3B-204ENST00000594372 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
SIN3B-204ENST00000594372 DOT1LQ8TEK3 1739 aa17.55■□□□□ 0.4
SIN3B-204ENST00000594372 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
SIN3B-204ENST00000594372 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
SIN3B-204ENST00000594372 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
SIN3B-204ENST00000594372 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
SIN3B-204ENST00000594372 ZNF784Q8NCA9 323 aaPredicted RBP17.54■□□□□ 0.4
SIN3B-204ENST00000594372 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
SIN3B-204ENST00000594372 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
SIN3B-204ENST00000594372 ERBB3P21860 1342 aa17.53■□□□□ 0.4
SIN3B-204ENST00000594372 KCNQ4P56696 695 aa17.53■□□□□ 0.4
SIN3B-204ENST00000594372 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SIN3B-204ENST00000594372 SGIP1Q9BQI5 828 aa17.53■□□□□ 0.4
SIN3B-204ENST00000594372 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
SIN3B-204ENST00000594372 LTV1Q96GA3 475 aaPredicted RBP17.52■□□□□ 0.4
SIN3B-204ENST00000594372 MTFR1LQ9H019 292 aa17.52■□□□□ 0.4
SIN3B-204ENST00000594372 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.4
SIN3B-204ENST00000594372 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
SIN3B-204ENST00000594372 QSER1Q2KHR3 1735 aa17.51■□□□□ 0.39
SIN3B-204ENST00000594372 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
SIN3B-204ENST00000594372 IL2RBP14784 551 aa17.5■□□□□ 0.39
SIN3B-204ENST00000594372 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
SIN3B-204ENST00000594372 FBLN1P23142 703 aa17.49■□□□□ 0.39
SIN3B-204ENST00000594372 ARXQ96QS3 562 aa17.49■□□□□ 0.39
SIN3B-204ENST00000594372 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
SIN3B-204ENST00000594372 LY75O60449 1722 aa17.48■□□□□ 0.39
SIN3B-204ENST00000594372 DDX54Q8TDD1 881 aaKnown RBP17.48■□□□□ 0.39
SIN3B-204ENST00000594372 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
SIN3B-204ENST00000594372 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
SIN3B-204ENST00000594372 PELP1Q8IZL8 1130 aaKnown RBP17.46■□□□□ 0.39
SIN3B-204ENST00000594372 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
SIN3B-204ENST00000594372 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
SIN3B-204ENST00000594372 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
SIN3B-204ENST00000594372 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
SIN3B-204ENST00000594372 AKT1S1Q96B36 256 aa17.43■□□□□ 0.38
SIN3B-204ENST00000594372 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
SIN3B-204ENST00000594372 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
SIN3B-204ENST00000594372 GPR162Q16538 588 aa17.42■□□□□ 0.38
SIN3B-204ENST00000594372 MEGF6O75095 1541 aa17.42■□□□□ 0.38
SIN3B-204ENST00000594372 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
SIN3B-204ENST00000594372 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
SIN3B-204ENST00000594372 NSD2O96028 1365 aa17.4■□□□□ 0.38
SIN3B-204ENST00000594372 TAF1LQ8IZX4 1826 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms