RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 PPM1GO15355 546 aaPredicted RBP25.4■■□□□ 1.66
ARHGEF1-205ENST00000593609 CFAP53Q96M91 514 aa25.4■■□□□ 1.66
ARHGEF1-205ENST00000593609 FAM83GA6ND36 823 aa25.39■■□□□ 1.66
ARHGEF1-205ENST00000593609 LMO7Q8WWI1 1683 aa25.39■■□□□ 1.65
ARHGEF1-205ENST00000593609 COL18A1P39060 1754 aa25.39■■□□□ 1.65
ARHGEF1-205ENST00000593609 ZBTB7CA1YPR0 619 aa25.38■■□□□ 1.65
ARHGEF1-205ENST00000593609 CHRNA2Q15822 529 aa25.37■■□□□ 1.65
ARHGEF1-205ENST00000593609 CCER2I3L3R5 266 aa25.36■■□□□ 1.65
ARHGEF1-205ENST00000593609 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
ARHGEF1-205ENST00000593609 COL3A1P02461 1466 aaPredicted RBP25.35■■□□□ 1.65
ARHGEF1-205ENST00000593609 HSP90AB2PQ58FF8 381 aa25.35■■□□□ 1.65
ARHGEF1-205ENST00000593609 MIER1Q8N108 512 aa25.35■■□□□ 1.65
ARHGEF1-205ENST00000593609 SLIT2O94813 1529 aa25.34■■□□□ 1.65
ARHGEF1-205ENST00000593609 CAMTA1Q9Y6Y1 1673 aa25.34■■□□□ 1.65
ARHGEF1-205ENST00000593609 MEX3CQ5U5Q3 659 aaKnown RBP25.34■■□□□ 1.65
ARHGEF1-205ENST00000593609 AXIN2Q9Y2T1 843 aa25.34■■□□□ 1.65
ARHGEF1-205ENST00000593609 FNBP4Q8N3X1 1017 aaPredicted RBP25.32■■□□□ 1.64
ARHGEF1-205ENST00000593609 ERBB3P21860 1342 aa25.32■■□□□ 1.64
ARHGEF1-205ENST00000593609 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 NGLY1Q96IV0 654 aa25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 BTG4Q9NY30 223 aa25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 COL5A2P05997 1499 aaPredicted RBP25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 PLCH1Q4KWH8 1693 aa25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 NWD2Q9ULI1 1742 aa25.31■■□□□ 1.64
ARHGEF1-205ENST00000593609 ANKRD24Q8TF21 1146 aa25.3■■□□□ 1.64
ARHGEF1-205ENST00000593609 EIF4A2Q14240 407 aaKnown RBP25.29■■□□□ 1.64
ARHGEF1-205ENST00000593609 IL13P35225 146 aa25.28■■□□□ 1.64
ARHGEF1-205ENST00000593609 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
ARHGEF1-205ENST00000593609 NUDCQ9Y266 331 aa25.28■■□□□ 1.64
ARHGEF1-205ENST00000593609 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
ARHGEF1-205ENST00000593609 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
ARHGEF1-205ENST00000593609 EVA1CP58658 441 aa25.25■■□□□ 1.63
ARHGEF1-205ENST00000593609 UNC5CLQ8IV45 518 aa25.25■■□□□ 1.63
ARHGEF1-205ENST00000593609 BCL9LQ86UU0 1499 aa25.25■■□□□ 1.63
ARHGEF1-205ENST00000593609 NRAPQ86VF7 1730 aa25.25■■□□□ 1.63
ARHGEF1-205ENST00000593609 CCDC184Q52MB2 194 aa25.24■■□□□ 1.63
ARHGEF1-205ENST00000593609 LTV1Q96GA3 475 aaPredicted RBP25.24■■□□□ 1.63
ARHGEF1-205ENST00000593609 RGPD5Q99666 1765 aa25.23■■□□□ 1.63
ARHGEF1-205ENST00000593609 AFF2P51816 1311 aa25.23■■□□□ 1.63
ARHGEF1-205ENST00000593609 CSB-PGBD3P0DP91 1061 aa25.23■■□□□ 1.63
ARHGEF1-205ENST00000593609 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.23■■□□□ 1.63
ARHGEF1-205ENST00000593609 USP21Q9UK80 565 aa25.22■■□□□ 1.63
ARHGEF1-205ENST00000593609 CRB1P82279 1406 aa25.21■■□□□ 1.63
ARHGEF1-205ENST00000593609 NCAPD2Q15021 1401 aa25.21■■□□□ 1.63
ARHGEF1-205ENST00000593609 IGSF1Q8N6C5 1336 aa25.21■■□□□ 1.63
ARHGEF1-205ENST00000593609 STRN4Q9NRL3 753 aa25.21■■□□□ 1.63
ARHGEF1-205ENST00000593609 EYA1Q99502 592 aa25.2■■□□□ 1.62
ARHGEF1-205ENST00000593609 CARD10Q9BWT7 1032 aa25.2■■□□□ 1.62
ARHGEF1-205ENST00000593609 RGPD1P0DJD0 1748 aa25.2■■□□□ 1.62
ARHGEF1-205ENST00000593609 VPS72Q15906 364 aa25.19■■□□□ 1.62
ARHGEF1-205ENST00000593609 LARP1Q6PKG0 1096 aaKnown RBP25.19■■□□□ 1.62
ARHGEF1-205ENST00000593609 TOM1L2Q6ZVM7 507 aa25.19■■□□□ 1.62
ARHGEF1-205ENST00000593609 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
ARHGEF1-205ENST00000593609 NLRP2Q9NX02 1062 aa25.19■■□□□ 1.62
ARHGEF1-205ENST00000593609 WDR43Q15061 677 aaKnown RBP eCLIP25.18■■□□□ 1.62
ARHGEF1-205ENST00000593609 NBPF6Q5VWK0 638 aa25.18■■□□□ 1.62
ARHGEF1-205ENST00000593609 NBPF4Q96M43 638 aa25.18■■□□□ 1.62
ARHGEF1-205ENST00000593609 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
ARHGEF1-205ENST00000593609 KDRP35968 1356 aa25.17■■□□□ 1.62
ARHGEF1-205ENST00000593609 ZNF772Q68DY9 489 aaPredicted RBP25.16■■□□□ 1.62
ARHGEF1-205ENST00000593609 SPATA31A5Q5VU36 1347 aa25.15■■□□□ 1.62
ARHGEF1-205ENST00000593609 SPATA31A7Q8IWB4 1347 aa25.15■■□□□ 1.62
ARHGEF1-205ENST00000593609 ATRNO75882 1429 aa25.15■■□□□ 1.62
ARHGEF1-205ENST00000593609 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
ARHGEF1-205ENST00000593609 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
ARHGEF1-205ENST00000593609 PLEKHG2Q9H7P9 1386 aa25.15■■□□□ 1.62
ARHGEF1-205ENST00000593609 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.62
ARHGEF1-205ENST00000593609 SPATA31A1Q5TZJ5 1347 aa25.13■■□□□ 1.61
ARHGEF1-205ENST00000593609 FCHSD2O94868 740 aa25.13■■□□□ 1.61
ARHGEF1-205ENST00000593609 THRAP3Q9Y2W1 955 aaKnown RBP25.13■■□□□ 1.61
ARHGEF1-205ENST00000593609 SULT6B1Q6IMI4 303 aa25.11■■□□□ 1.61
ARHGEF1-205ENST00000593609 PNNQ9H307 717 aaKnown RBP25.11■■□□□ 1.61
ARHGEF1-205ENST00000593609 TCP11L2Q8N4U5 519 aa25.1■■□□□ 1.61
ARHGEF1-205ENST00000593609 ADAMTS8Q9UP79 889 aa25.1■■□□□ 1.61
ARHGEF1-205ENST00000593609 RGPD2P0DJD1 1756 aa25.09■■□□□ 1.61
ARHGEF1-205ENST00000593609 AEBP1Q8IUX7 1158 aa25.09■■□□□ 1.61
ARHGEF1-205ENST00000593609 USHBP1Q8N6Y0 703 aa25.09■■□□□ 1.61
ARHGEF1-205ENST00000593609 CDCA7Q9BWT1 371 aaPredicted RBP25.09■■□□□ 1.61
ARHGEF1-205ENST00000593609 RSPH6AQ9H0K4 717 aa25.09■■□□□ 1.61
ARHGEF1-205ENST00000593609 BARGINQ6ZT62 677 aa25.08■■□□□ 1.61
ARHGEF1-205ENST00000593609 QTRT2Q9H974 415 aaKnown RBP25.08■■□□□ 1.61
ARHGEF1-205ENST00000593609 CCDC9Q9Y3X0 531 aaKnown RBP25.08■■□□□ 1.61
ARHGEF1-205ENST00000593609 HMOX1P09601 288 aa25.07■■□□□ 1.6
ARHGEF1-205ENST00000593609 RAPGEF4Q8WZA2 1011 aa25.07■■□□□ 1.6
ARHGEF1-205ENST00000593609 GJD4Q96KN9 370 aaPredicted RBP25.07■■□□□ 1.6
ARHGEF1-205ENST00000593609 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
ARHGEF1-205ENST00000593609 DISP2A7MBM2 1401 aa25.05■■□□□ 1.6
ARHGEF1-205ENST00000593609 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
ARHGEF1-205ENST00000593609 USP35Q9P2H5 1018 aa25.05■■□□□ 1.6
ARHGEF1-205ENST00000593609 IL2RBP14784 551 aa25.04■■□□□ 1.6
ARHGEF1-205ENST00000593609 PRKAR2BP31323 418 aa25.04■■□□□ 1.6
ARHGEF1-205ENST00000593609 GLI3P10071 1580 aa25.03■■□□□ 1.6
ARHGEF1-205ENST00000593609 TATP17735 454 aaPredicted RBP25.03■■□□□ 1.6
ARHGEF1-205ENST00000593609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.03■■□□□ 1.6
ARHGEF1-205ENST00000593609 OVOS2A0A0G2JMS6 1433 aa25.03■■□□□ 1.6
ARHGEF1-205ENST00000593609 MEGF6O75095 1541 aa25.02■■□□□ 1.6
ARHGEF1-205ENST00000593609 RGS17Q9UGC6 210 aaPredicted RBP25.02■■□□□ 1.6
ARHGEF1-205ENST00000593609 NEFMP07197 916 aa25.01■■□□□ 1.59
ARHGEF1-205ENST00000593609 RBM6P78332 1123 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms