RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 TTC21BQ7Z4L5 1316 aa25.08■■□□□ 1.6
RETREG3-212ENST00000593251 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
RETREG3-212ENST00000593251 RGPD3A6NKT7 1758 aaPredicted RBP25.06■■□□□ 1.6
RETREG3-212ENST00000593251 RGPD4Q7Z3J3 1758 aa25.06■■□□□ 1.6
RETREG3-212ENST00000593251 DDB1Q16531 1140 aa25.06■■□□□ 1.6
RETREG3-212ENST00000593251 WDR17Q8IZU2 1322 aa25.05■■□□□ 1.6
RETREG3-212ENST00000593251 MON2Q7Z3U7 1717 aa25.04■■□□□ 1.6
RETREG3-212ENST00000593251 PTF1AQ7RTS3 328 aa25.03■■□□□ 1.6
RETREG3-212ENST00000593251 ARHGEF25Q86VW2 580 aa25.03■■□□□ 1.6
RETREG3-212ENST00000593251 ZNF692Q9BU19 519 aaPredicted RBP25.03■■□□□ 1.6
RETREG3-212ENST00000593251 C11orf95C9JLR9 678 aaPredicted RBP25.02■■□□□ 1.6
RETREG3-212ENST00000593251 NFAT5O94916 1531 aa25.02■■□□□ 1.6
RETREG3-212ENST00000593251 MARCH10Q8NA82 808 aaPredicted RBP25■■□□□ 1.59
RETREG3-212ENST00000593251 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
RETREG3-212ENST00000593251 TTC21AQ8NDW8 1320 aa25■■□□□ 1.59
RETREG3-212ENST00000593251 KTN1Q86UP2 1357 aaKnown RBP25■■□□□ 1.59
RETREG3-212ENST00000593251 CSB-PGBD3P0DP91 1061 aa24.99■■□□□ 1.59
RETREG3-212ENST00000593251 LTN1O94822 1766 aa24.97■■□□□ 1.59
RETREG3-212ENST00000593251 PLSCR1O15162 318 aa24.96■■□□□ 1.59
RETREG3-212ENST00000593251 CARD10Q9BWT7 1032 aa24.96■■□□□ 1.59
RETREG3-212ENST00000593251 BCL11BQ9C0K0 894 aaPredicted RBP24.96■■□□□ 1.59
RETREG3-212ENST00000593251 CASZ1Q86V15 1759 aa24.95■■□□□ 1.59
RETREG3-212ENST00000593251 CDCA7Q9BWT1 371 aaPredicted RBP24.95■■□□□ 1.58
RETREG3-212ENST00000593251 SPON1Q9HCB6 807 aa24.95■■□□□ 1.58
RETREG3-212ENST00000593251 ANO8Q9HCE9 1232 aaPredicted RBP24.95■■□□□ 1.58
RETREG3-212ENST00000593251 KCNQ2O43526 872 aa24.94■■□□□ 1.58
RETREG3-212ENST00000593251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.94■■□□□ 1.58
RETREG3-212ENST00000593251 PPP1R1BQ9UD71 204 aaPredicted RBP24.94■■□□□ 1.58
RETREG3-212ENST00000593251 USP54Q70EL1 1684 aa24.94■■□□□ 1.58
RETREG3-212ENST00000593251 CD163L1Q9NR16 1453 aa24.91■■□□□ 1.58
RETREG3-212ENST00000593251 PROM2Q8N271 834 aa24.91■■□□□ 1.58
RETREG3-212ENST00000593251 ABCC6O95255 1503 aa24.91■■□□□ 1.58
RETREG3-212ENST00000593251 BCL9O00512 1426 aa24.9■■□□□ 1.58
RETREG3-212ENST00000593251 EXOC5O00471 708 aa24.9■■□□□ 1.58
RETREG3-212ENST00000593251 NME9Q86XW9 330 aa24.9■■□□□ 1.58
RETREG3-212ENST00000593251 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.58
RETREG3-212ENST00000593251 PDGFDQ9GZP0 370 aaPredicted RBP24.89■■□□□ 1.58
RETREG3-212ENST00000593251 CCDC7Q96M83 1385 aa24.89■■□□□ 1.57
RETREG3-212ENST00000593251 SBNO2Q9Y2G9 1366 aa24.89■■□□□ 1.57
RETREG3-212ENST00000593251 TMC1Q8TDI8 760 aa24.88■■□□□ 1.57
RETREG3-212ENST00000593251 USP31Q70CQ4 1352 aa24.88■■□□□ 1.57
RETREG3-212ENST00000593251 TNS2Q63HR2 1409 aa24.87■■□□□ 1.57
RETREG3-212ENST00000593251 NHSQ6T4R5 1651 aa24.87■■□□□ 1.57
RETREG3-212ENST00000593251 KAT6BQ8WYB5 2073 aa24.87■■□□□ 1.57
RETREG3-212ENST00000593251 TXNRD1Q16881 649 aa24.85■■□□□ 1.57
RETREG3-212ENST00000593251 SLC12A5Q9H2X9 1139 aa24.85■■□□□ 1.57
RETREG3-212ENST00000593251 NLRP2Q9NX02 1062 aa24.84■■□□□ 1.57
RETREG3-212ENST00000593251 ERBB3P21860 1342 aa24.84■■□□□ 1.57
RETREG3-212ENST00000593251 MYOM1P52179 1685 aa24.83■■□□□ 1.57
RETREG3-212ENST00000593251 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
RETREG3-212ENST00000593251 ZBTB7AO95365 584 aa24.82■■□□□ 1.56
RETREG3-212ENST00000593251 HDGFL2Q7Z4V5 671 aaPredicted RBP24.82■■□□□ 1.56
RETREG3-212ENST00000593251 ACSBG1Q96GR2 724 aa24.82■■□□□ 1.56
RETREG3-212ENST00000593251 BTAF1O14981 1849 aa24.82■■□□□ 1.56
RETREG3-212ENST00000593251 YY1P25490 414 aa24.81■■□□□ 1.56
RETREG3-212ENST00000593251 EDC4Q6P2E9 1401 aaKnown RBP24.8■■□□□ 1.56
RETREG3-212ENST00000593251 STK32BQ9NY57 414 aa24.8■■□□□ 1.56
RETREG3-212ENST00000593251 A0A1W2PP64 1363 aa24.8■■□□□ 1.56
RETREG3-212ENST00000593251 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
RETREG3-212ENST00000593251 ATF5Q9Y2D1 282 aaPredicted RBP24.79■■□□□ 1.56
RETREG3-212ENST00000593251 IL2RBP14784 551 aa24.78■■□□□ 1.56
RETREG3-212ENST00000593251 TONSLQ96HA7 1378 aa24.78■■□□□ 1.56
RETREG3-212ENST00000593251 SLC15A2Q16348 729 aa24.77■■□□□ 1.56
RETREG3-212ENST00000593251 TERF2IPQ9NYB0 399 aa24.76■■□□□ 1.55
RETREG3-212ENST00000593251 DCAF8L1A6NGE4 600 aa24.75■■□□□ 1.55
RETREG3-212ENST00000593251 PTGER2P43116 358 aa24.74■■□□□ 1.55
RETREG3-212ENST00000593251 PAPPAQ13219 1627 aa24.74■■□□□ 1.55
RETREG3-212ENST00000593251 FAM208AQ9UK61 1670 aaKnown RBP24.74■■□□□ 1.55
RETREG3-212ENST00000593251 RGPD2P0DJD1 1756 aa24.74■■□□□ 1.55
RETREG3-212ENST00000593251 LTV1Q96GA3 475 aaPredicted RBP24.72■■□□□ 1.55
RETREG3-212ENST00000593251 IP6K1Q92551 441 aa24.69■■□□□ 1.54
RETREG3-212ENST00000593251 PUS7Q96PZ0 661 aaKnown RBP24.68■■□□□ 1.54
RETREG3-212ENST00000593251 ST20-MTHFSA0A0A6YYL1 179 aa24.67■■□□□ 1.54
RETREG3-212ENST00000593251 DDX54Q8TDD1 881 aaKnown RBP24.67■■□□□ 1.54
RETREG3-212ENST00000593251 TESK2Q96S53 571 aa24.67■■□□□ 1.54
RETREG3-212ENST00000593251 FHDC1Q9C0D6 1143 aaPredicted RBP24.67■■□□□ 1.54
RETREG3-212ENST00000593251 MTFR1LQ9H019 292 aa24.67■■□□□ 1.54
RETREG3-212ENST00000593251 DOT1LQ8TEK3 1739 aa24.66■■□□□ 1.54
RETREG3-212ENST00000593251 FBLN1P23142 703 aa24.66■■□□□ 1.54
RETREG3-212ENST00000593251 SHANK3Q9BYB0 1731 aa24.66■■□□□ 1.54
RETREG3-212ENST00000593251 ZNF827Q17R98 1081 aa24.65■■□□□ 1.54
RETREG3-212ENST00000593251 LRRC4BQ9NT99 713 aa24.65■■□□□ 1.54
RETREG3-212ENST00000593251 COG3Q96JB2 828 aa24.64■■□□□ 1.54
RETREG3-212ENST00000593251 SGIP1Q9BQI5 828 aa24.64■■□□□ 1.54
RETREG3-212ENST00000593251 MAP3K19Q56UN5 1328 aa24.63■■□□□ 1.53
RETREG3-212ENST00000593251 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
RETREG3-212ENST00000593251 SYT17Q9BSW7 474 aa24.63■■□□□ 1.53
RETREG3-212ENST00000593251 HOXC9P31274 260 aa24.62■■□□□ 1.53
RETREG3-212ENST00000593251 QSER1Q2KHR3 1735 aa24.61■■□□□ 1.53
RETREG3-212ENST00000593251 AMPHP49418 695 aa24.6■■□□□ 1.53
RETREG3-212ENST00000593251 CHD4Q14839 1912 aa24.59■■□□□ 1.53
RETREG3-212ENST00000593251 LY75O60449 1722 aa24.59■■□□□ 1.53
RETREG3-212ENST00000593251 KCNQ4P56696 695 aa24.58■■□□□ 1.53
RETREG3-212ENST00000593251 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
RETREG3-212ENST00000593251 ARXQ96QS3 562 aa24.58■■□□□ 1.53
RETREG3-212ENST00000593251 MEGF6O75095 1541 aa24.57■■□□□ 1.52
RETREG3-212ENST00000593251 UTRNP46939 3433 aa24.57■■□□□ 1.52
RETREG3-212ENST00000593251 ANKRD36BQ8N2N9 1353 aa24.56■■□□□ 1.52
RETREG3-212ENST00000593251 PRIM1P49642 420 aaKnown RBP24.56■■□□□ 1.52
RETREG3-212ENST00000593251 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms