RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
PRKCSH-220ENST00000593104 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-220ENST00000593104 CPSF1Q10570 1443 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-220ENST00000593104 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
PRKCSH-220ENST00000593104 PROM2Q8N271 834 aa16.14■□□□□ 0.17
PRKCSH-220ENST00000593104 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-220ENST00000593104 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
PRKCSH-220ENST00000593104 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
PRKCSH-220ENST00000593104 KCNQ2O43526 872 aa16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 CSB-PGBD3P0DP91 1061 aa16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 ARHGEF25Q86VW2 580 aa16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-220ENST00000593104 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-220ENST00000593104 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
PRKCSH-220ENST00000593104 NFAT5O94916 1531 aa16.11■□□□□ 0.17
PRKCSH-220ENST00000593104 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
PRKCSH-220ENST00000593104 YY1P25490 414 aa16.11■□□□□ 0.17
PRKCSH-220ENST00000593104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRKCSH-220ENST00000593104 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-220ENST00000593104 PLSCR1O15162 318 aa16.09■□□□□ 0.17
PRKCSH-220ENST00000593104 MYOM1P52179 1685 aa16.08■□□□□ 0.17
PRKCSH-220ENST00000593104 MON2Q7Z3U7 1717 aa16.08■□□□□ 0.17
PRKCSH-220ENST00000593104 NME9Q86XW9 330 aa16.08■□□□□ 0.16
PRKCSH-220ENST00000593104 ACSBG1Q96GR2 724 aa16.08■□□□□ 0.16
PRKCSH-220ENST00000593104 CARD10Q9BWT7 1032 aa16.08■□□□□ 0.16
PRKCSH-220ENST00000593104 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-220ENST00000593104 KTN1Q86UP2 1357 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-220ENST00000593104 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
PRKCSH-220ENST00000593104 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
PRKCSH-220ENST00000593104 LTN1O94822 1766 aa16.05■□□□□ 0.16
PRKCSH-220ENST00000593104 CD163L1Q9NR16 1453 aa16.05■□□□□ 0.16
PRKCSH-220ENST00000593104 TTC21AQ8NDW8 1320 aa16.05■□□□□ 0.16
PRKCSH-220ENST00000593104 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
PRKCSH-220ENST00000593104 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
PRKCSH-220ENST00000593104 EXOC5O00471 708 aa16.04■□□□□ 0.16
PRKCSH-220ENST00000593104 PTGER2P43116 358 aa16.04■□□□□ 0.16
PRKCSH-220ENST00000593104 TNS2Q63HR2 1409 aa16.03■□□□□ 0.16
PRKCSH-220ENST00000593104 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-220ENST00000593104 TMC1Q8TDI8 760 aa16.03■□□□□ 0.16
PRKCSH-220ENST00000593104 CDCA7Q9BWT1 371 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-220ENST00000593104 BCL9O00512 1426 aa16.02■□□□□ 0.16
PRKCSH-220ENST00000593104 SBNO2Q9Y2G9 1366 aa16.02■□□□□ 0.16
PRKCSH-220ENST00000593104 NHSQ6T4R5 1651 aa16.02■□□□□ 0.16
PRKCSH-220ENST00000593104 SLC12A5Q9H2X9 1139 aa16.02■□□□□ 0.16
PRKCSH-220ENST00000593104 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.16
PRKCSH-220ENST00000593104 STK32BQ9NY57 414 aa16.02■□□□□ 0.16
PRKCSH-220ENST00000593104 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
PRKCSH-220ENST00000593104 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
PRKCSH-220ENST00000593104 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
PRKCSH-220ENST00000593104 ERBB3P21860 1342 aa16■□□□□ 0.15
PRKCSH-220ENST00000593104 BTAF1O14981 1849 aa16■□□□□ 0.15
PRKCSH-220ENST00000593104 USP31Q70CQ4 1352 aa16■□□□□ 0.15
PRKCSH-220ENST00000593104 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
PRKCSH-220ENST00000593104 ANKRD24Q8TF21 1146 aa15.99■□□□□ 0.15
PRKCSH-220ENST00000593104 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
PRKCSH-220ENST00000593104 FHDC1Q9C0D6 1143 aaPredicted RBP15.99■□□□□ 0.15
PRKCSH-220ENST00000593104 ABCC6O95255 1503 aa15.99■□□□□ 0.15
PRKCSH-220ENST00000593104 PAPPAQ13219 1627 aa15.98■□□□□ 0.15
PRKCSH-220ENST00000593104 FBLN1P23142 703 aa15.98■□□□□ 0.15
PRKCSH-220ENST00000593104 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
PRKCSH-220ENST00000593104 LTV1Q96GA3 475 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-220ENST00000593104 IL2RBP14784 551 aa15.97■□□□□ 0.15
PRKCSH-220ENST00000593104 KCNQ4P56696 695 aa15.97■□□□□ 0.15
PRKCSH-220ENST00000593104 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
PRKCSH-220ENST00000593104 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
PRKCSH-220ENST00000593104 SYT17Q9BSW7 474 aa15.96■□□□□ 0.15
PRKCSH-220ENST00000593104 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.15
PRKCSH-220ENST00000593104 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
PRKCSH-220ENST00000593104 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
PRKCSH-220ENST00000593104 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-220ENST00000593104 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-220ENST00000593104 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
PRKCSH-220ENST00000593104 EDC4Q6P2E9 1401 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-220ENST00000593104 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
PRKCSH-220ENST00000593104 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
PRKCSH-220ENST00000593104 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
PRKCSH-220ENST00000593104 ZNF784Q8NCA9 323 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-220ENST00000593104 SHANK3Q9BYB0 1731 aa15.89■□□□□ 0.13
PRKCSH-220ENST00000593104 IP6K1Q92551 441 aa15.89■□□□□ 0.13
PRKCSH-220ENST00000593104 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-220ENST00000593104 ARXQ96QS3 562 aa15.89■□□□□ 0.13
PRKCSH-220ENST00000593104 MAP3K19Q56UN5 1328 aa15.89■□□□□ 0.13
PRKCSH-220ENST00000593104 FAM208AQ9UK61 1670 aaKnown RBP15.89■□□□□ 0.13
PRKCSH-220ENST00000593104 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
PRKCSH-220ENST00000593104 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 ST20-MTHFSA0A0A6YYL1 179 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 USHBP1Q8N6Y0 703 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 TESK2Q96S53 571 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 MEGF6O75095 1541 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 PNPLA7Q6ZV29 1317 aa15.87■□□□□ 0.13
PRKCSH-220ENST00000593104 HOXC9P31274 260 aa15.86■□□□□ 0.13
PRKCSH-220ENST00000593104 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-220ENST00000593104 NSD2O96028 1365 aa15.86■□□□□ 0.13
PRKCSH-220ENST00000593104 CHD4Q14839 1912 aa15.86■□□□□ 0.13
PRKCSH-220ENST00000593104 RRS1Q15050 365 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-220ENST00000593104 AMPHP49418 695 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms