RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 USP35Q9P2H5 1018 aa20.97■□□□□ 0.95
ERCC1-217ENST00000592905 SPATA31A5Q5VU36 1347 aa20.97■□□□□ 0.95
ERCC1-217ENST00000592905 SPATA31A7Q8IWB4 1347 aa20.97■□□□□ 0.95
ERCC1-217ENST00000592905 AATKQ6ZMQ8 1374 aa20.97■□□□□ 0.95
ERCC1-217ENST00000592905 NSD3Q9BZ95 1437 aa20.96■□□□□ 0.95
ERCC1-217ENST00000592905 A0A0G2JS52 829 aa20.95■□□□□ 0.94
ERCC1-217ENST00000592905 MYT1Q01538 1121 aa20.95■□□□□ 0.94
ERCC1-217ENST00000592905 SEPT12Q8IYM1 358 aa20.95■□□□□ 0.94
ERCC1-217ENST00000592905 COL5A2P05997 1499 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-217ENST00000592905 PANK3Q9H999 370 aa20.94■□□□□ 0.94
ERCC1-217ENST00000592905 KIF7Q2M1P5 1343 aa20.94■□□□□ 0.94
ERCC1-217ENST00000592905 SPATA31A1Q5TZJ5 1347 aa20.94■□□□□ 0.94
ERCC1-217ENST00000592905 ONECUT3O60422 494 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-217ENST00000592905 TOM1L2Q6ZVM7 507 aa20.89■□□□□ 0.93
ERCC1-217ENST00000592905 EP400Q96L91 3159 aa20.89■□□□□ 0.93
ERCC1-217ENST00000592905 CSB-PGBD3P0DP91 1061 aa20.88■□□□□ 0.93
ERCC1-217ENST00000592905 UPF1Q92900 1129 aaKnown RBP eCLIP20.88■□□□□ 0.93
ERCC1-217ENST00000592905 RRS1Q15050 365 aaKnown RBP20.87■□□□□ 0.93
ERCC1-217ENST00000592905 CRB1P82279 1406 aa20.87■□□□□ 0.93
ERCC1-217ENST00000592905 CGNL1Q0VF96 1302 aa20.86■□□□□ 0.93
ERCC1-217ENST00000592905 MAP3K19Q56UN5 1328 aa20.86■□□□□ 0.93
ERCC1-217ENST00000592905 WDR17Q8IZU2 1322 aa20.86■□□□□ 0.93
ERCC1-217ENST00000592905 TCP11L2Q8N4U5 519 aa20.86■□□□□ 0.93
ERCC1-217ENST00000592905 KRT27Q7Z3Y8 459 aa20.85■□□□□ 0.93
ERCC1-217ENST00000592905 THSD7AQ9UPZ6 1657 aa20.85■□□□□ 0.93
ERCC1-217ENST00000592905 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
ERCC1-217ENST00000592905 AMPHP49418 695 aa20.84■□□□□ 0.93
ERCC1-217ENST00000592905 FAM182BQ5T319 152 aa20.84■□□□□ 0.93
ERCC1-217ENST00000592905 IP6K1Q92551 441 aa20.84■□□□□ 0.93
ERCC1-217ENST00000592905 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
ERCC1-217ENST00000592905 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
ERCC1-217ENST00000592905 BARGINQ6ZT62 677 aa20.83■□□□□ 0.93
ERCC1-217ENST00000592905 ANKRD24Q8TF21 1146 aa20.83■□□□□ 0.93
ERCC1-217ENST00000592905 ABCC6O95255 1503 aa20.83■□□□□ 0.92
ERCC1-217ENST00000592905 HOXC9P31274 260 aa20.82■□□□□ 0.92
ERCC1-217ENST00000592905 MAP2P11137 1827 aaKnown RBP20.82■□□□□ 0.92
ERCC1-217ENST00000592905 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-217ENST00000592905 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
ERCC1-217ENST00000592905 THRAP3Q9Y2W1 955 aaKnown RBP20.81■□□□□ 0.92
ERCC1-217ENST00000592905 ANKRD26Q9UPS8 1709 aa20.81■□□□□ 0.92
ERCC1-217ENST00000592905 ERBB3P21860 1342 aa20.8■□□□□ 0.92
ERCC1-217ENST00000592905 CARD10Q9BWT7 1032 aa20.8■□□□□ 0.92
ERCC1-217ENST00000592905 RGPD2P0DJD1 1756 aa20.8■□□□□ 0.92
ERCC1-217ENST00000592905 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
ERCC1-217ENST00000592905 PEAK1Q9H792 1746 aa20.78■□□□□ 0.92
ERCC1-217ENST00000592905 WNK3Q9BYP7 1800 aa20.78■□□□□ 0.92
ERCC1-217ENST00000592905 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
ERCC1-217ENST00000592905 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
ERCC1-217ENST00000592905 PPM1GO15355 546 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-217ENST00000592905 HSP90AB2PQ58FF8 381 aa20.76■□□□□ 0.91
ERCC1-217ENST00000592905 PARP4Q9UKK3 1724 aaKnown RBP20.75■□□□□ 0.91
ERCC1-217ENST00000592905 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
ERCC1-217ENST00000592905 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
ERCC1-217ENST00000592905 PER1O15534 1290 aaPredicted RBP20.74■□□□□ 0.91
ERCC1-217ENST00000592905 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
ERCC1-217ENST00000592905 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
ERCC1-217ENST00000592905 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
ERCC1-217ENST00000592905 DDB1Q16531 1140 aa20.72■□□□□ 0.91
ERCC1-217ENST00000592905 POLKQ9UBT6 870 aa20.72■□□□□ 0.91
ERCC1-217ENST00000592905 FLT4P35916 1363 aa20.72■□□□□ 0.91
ERCC1-217ENST00000592905 LRRC37A3O60309 1634 aa20.71■□□□□ 0.91
ERCC1-217ENST00000592905 FAM208AQ9UK61 1670 aaKnown RBP20.71■□□□□ 0.91
ERCC1-217ENST00000592905 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
ERCC1-217ENST00000592905 NSD2O96028 1365 aa20.71■□□□□ 0.91
ERCC1-217ENST00000592905 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
ERCC1-217ENST00000592905 INSRP06213 1382 aa20.7■□□□□ 0.9
ERCC1-217ENST00000592905 DISP2A7MBM2 1401 aa20.7■□□□□ 0.9
ERCC1-217ENST00000592905 NBPF6Q5VWK0 638 aa20.69■□□□□ 0.9
ERCC1-217ENST00000592905 NBPF4Q96M43 638 aa20.69■□□□□ 0.9
ERCC1-217ENST00000592905 CDCA7Q9BWT1 371 aaPredicted RBP20.69■□□□□ 0.9
ERCC1-217ENST00000592905 EXOC5O00471 708 aa20.68■□□□□ 0.9
ERCC1-217ENST00000592905 IL2RBP14784 551 aa20.68■□□□□ 0.9
ERCC1-217ENST00000592905 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
ERCC1-217ENST00000592905 CCDC125Q86Z20 511 aa20.67■□□□□ 0.9
ERCC1-217ENST00000592905 KIF24Q5T7B8 1368 aa20.67■□□□□ 0.9
ERCC1-217ENST00000592905 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
ERCC1-217ENST00000592905 MARCH10Q8NA82 808 aaPredicted RBP20.66■□□□□ 0.9
ERCC1-217ENST00000592905 SMG6Q86US8 1419 aaKnown RBP20.66■□□□□ 0.9
ERCC1-217ENST00000592905 TRIM37O94972 964 aa20.65■□□□□ 0.9
ERCC1-217ENST00000592905 SF3B2Q13435 895 aaKnown RBP20.65■□□□□ 0.9
ERCC1-217ENST00000592905 DEFB132Q7Z7B7 95 aa20.65■□□□□ 0.9
ERCC1-217ENST00000592905 KAT6BQ8WYB5 2073 aa20.65■□□□□ 0.9
ERCC1-217ENST00000592905 RGPD1P0DJD0 1748 aa20.63■□□□□ 0.89
ERCC1-217ENST00000592905 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
ERCC1-217ENST00000592905 EIF4A2Q14240 407 aaKnown RBP20.61■□□□□ 0.89
ERCC1-217ENST00000592905 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
ERCC1-217ENST00000592905 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
ERCC1-217ENST00000592905 TNS2Q63HR2 1409 aa20.61■□□□□ 0.89
ERCC1-217ENST00000592905 MEGF6O75095 1541 aa20.6■□□□□ 0.89
ERCC1-217ENST00000592905 EYA1Q99502 592 aa20.6■□□□□ 0.89
ERCC1-217ENST00000592905 DDX54Q8TDD1 881 aaKnown RBP20.59■□□□□ 0.89
ERCC1-217ENST00000592905 EN1Q05925 392 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-217ENST00000592905 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
ERCC1-217ENST00000592905 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
ERCC1-217ENST00000592905 APBA3O96018 575 aa20.57■□□□□ 0.88
ERCC1-217ENST00000592905 BAG6P46379 1132 aa20.57■□□□□ 0.88
ERCC1-217ENST00000592905 MTHFSP49914 203 aa20.57■□□□□ 0.88
ERCC1-217ENST00000592905 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
ERCC1-217ENST00000592905 TATP17735 454 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-217ENST00000592905 SHANK3Q9BYB0 1731 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms