RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 APBA3O96018 575 aa27.79■■■□□ 2.04
TNFRSF11A-204ENST00000592013 CSB-PGBD3P0DP91 1061 aa27.79■■■□□ 2.04
TNFRSF11A-204ENST00000592013 DDB1Q16531 1140 aa27.78■■■□□ 2.04
TNFRSF11A-204ENST00000592013 TNS1Q9HBL0 1735 aaKnown RBP27.78■■■□□ 2.04
TNFRSF11A-204ENST00000592013 USP31Q70CQ4 1352 aa27.77■■■□□ 2.04
TNFRSF11A-204ENST00000592013 OVOS2A0A0G2JMS6 1433 aa27.76■■■□□ 2.04
TNFRSF11A-204ENST00000592013 OVOS2A0A0J9YW53 1432 aa27.76■■■□□ 2.04
TNFRSF11A-204ENST00000592013 OVOS2Q6IE36 1432 aa27.76■■■□□ 2.04
TNFRSF11A-204ENST00000592013 EDC4Q6P2E9 1401 aaKnown RBP27.76■■■□□ 2.04
TNFRSF11A-204ENST00000592013 SOX12O15370 315 aa27.76■■■□□ 2.03
TNFRSF11A-204ENST00000592013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.76■■■□□ 2.03
TNFRSF11A-204ENST00000592013 CARD10Q9BWT7 1032 aa27.74■■■□□ 2.03
TNFRSF11A-204ENST00000592013 CCDC7Q96M83 1385 aa27.73■■■□□ 2.03
TNFRSF11A-204ENST00000592013 COL18A1P39060 1754 aa27.73■■■□□ 2.03
TNFRSF11A-204ENST00000592013 SRCAPQ6ZRS2 3230 aa27.72■■■□□ 2.03
TNFRSF11A-204ENST00000592013 NBPF14Q5TI25 921 aa27.72■■■□□ 2.03
TNFRSF11A-204ENST00000592013 CAMKK2Q96RR4 588 aa27.72■■■□□ 2.03
TNFRSF11A-204ENST00000592013 AXIN2Q9Y2T1 843 aa27.72■■■□□ 2.03
TNFRSF11A-204ENST00000592013 NFAT5O94916 1531 aa27.72■■■□□ 2.03
TNFRSF11A-204ENST00000592013 EZH2Q15910 746 aaKnown RBP27.71■■■□□ 2.03
TNFRSF11A-204ENST00000592013 SLC12A5Q9H2X9 1139 aa27.71■■■□□ 2.03
TNFRSF11A-204ENST00000592013 USP54Q70EL1 1684 aa27.71■■■□□ 2.03
TNFRSF11A-204ENST00000592013 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.02
TNFRSF11A-204ENST00000592013 LRP5O75197 1615 aa27.7■■■□□ 2.02
TNFRSF11A-204ENST00000592013 ST20-MTHFSA0A0A6YYL1 179 aa27.69■■■□□ 2.02
TNFRSF11A-204ENST00000592013 CD163L1Q9NR16 1453 aa27.69■■■□□ 2.02
TNFRSF11A-204ENST00000592013 PSDA5PKW4 1024 aaPredicted RBP27.68■■■□□ 2.02
TNFRSF11A-204ENST00000592013 CDCA8Q53HL2 280 aa27.68■■■□□ 2.02
TNFRSF11A-204ENST00000592013 NME9Q86XW9 330 aa27.67■■■□□ 2.02
TNFRSF11A-204ENST00000592013 A0A1W2PP64 1363 aa27.66■■■□□ 2.02
TNFRSF11A-204ENST00000592013 EXOC5O00471 708 aa27.66■■■□□ 2.02
TNFRSF11A-204ENST00000592013 TMF1P82094 1093 aa27.66■■■□□ 2.02
TNFRSF11A-204ENST00000592013 R3HDM1Q15032 1099 aaKnown RBP27.66■■■□□ 2.02
TNFRSF11A-204ENST00000592013 LRRC37A3O60309 1634 aa27.66■■■□□ 2.02
TNFRSF11A-204ENST00000592013 TESK2Q96S53 571 aa27.65■■■□□ 2.02
TNFRSF11A-204ENST00000592013 CLSPNQ9HAW4 1339 aa27.65■■■□□ 2.02
TNFRSF11A-204ENST00000592013 BCL9O00512 1426 aa27.64■■■□□ 2.02
TNFRSF11A-204ENST00000592013 WNK3Q9BYP7 1800 aa27.63■■■□□ 2.01
TNFRSF11A-204ENST00000592013 BCL11BQ9C0K0 894 aaPredicted RBP27.62■■■□□ 2.01
TNFRSF11A-204ENST00000592013 ERBB3P21860 1342 aa27.62■■■□□ 2.01
TNFRSF11A-204ENST00000592013 PLSCR1O15162 318 aa27.61■■■□□ 2.01
TNFRSF11A-204ENST00000592013 COG3Q96JB2 828 aa27.61■■■□□ 2.01
TNFRSF11A-204ENST00000592013 NLRP2Q9NX02 1062 aa27.61■■■□□ 2.01
TNFRSF11A-204ENST00000592013 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
TNFRSF11A-204ENST00000592013 USP47Q96K76 1375 aa27.6■■■□□ 2.01
TNFRSF11A-204ENST00000592013 PEAK1Q9H792 1746 aa27.59■■■□□ 2.01
TNFRSF11A-204ENST00000592013 ANKRD36BQ8N2N9 1353 aa27.59■■■□□ 2.01
TNFRSF11A-204ENST00000592013 RREB1Q92766 1687 aa27.59■■■□□ 2.01
TNFRSF11A-204ENST00000592013 RGPD3A6NKT7 1758 aaPredicted RBP27.58■■■□□ 2.01
TNFRSF11A-204ENST00000592013 RGPD4Q7Z3J3 1758 aa27.58■■■□□ 2.01
TNFRSF11A-204ENST00000592013 LTN1O94822 1766 aa27.57■■■□□ 2
TNFRSF11A-204ENST00000592013 ANKRD24Q8TF21 1146 aa27.56■■■□□ 2
TNFRSF11A-204ENST00000592013 TNS2Q63HR2 1409 aa27.56■■■□□ 2
TNFRSF11A-204ENST00000592013 IL2RBP14784 551 aa27.55■■■□□ 2
TNFRSF11A-204ENST00000592013 MARCH10Q8NA82 808 aaPredicted RBP27.55■■■□□ 2
TNFRSF11A-204ENST00000592013 IP6K1Q92551 441 aa27.53■■■□□ 2
TNFRSF11A-204ENST00000592013 NUP188Q5SRE5 1749 aa27.52■■■□□ 2
TNFRSF11A-204ENST00000592013 SBF2Q86WG5 1849 aa27.51■■□□□ 1.99
TNFRSF11A-204ENST00000592013 FAM208AQ9UK61 1670 aaKnown RBP27.51■■□□□ 1.99
TNFRSF11A-204ENST00000592013 AMPHP49418 695 aa27.49■■□□□ 1.99
TNFRSF11A-204ENST00000592013 RTL1A6NKG5 1358 aa27.47■■□□□ 1.99
TNFRSF11A-204ENST00000592013 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.98
TNFRSF11A-204ENST00000592013 SPON1Q9HCB6 807 aa27.44■■□□□ 1.98
TNFRSF11A-204ENST00000592013 SMG6Q86US8 1419 aaKnown RBP27.43■■□□□ 1.98
TNFRSF11A-204ENST00000592013 MAP3K19Q56UN5 1328 aa27.42■■□□□ 1.98
TNFRSF11A-204ENST00000592013 HOXC9P31274 260 aa27.41■■□□□ 1.98
TNFRSF11A-204ENST00000592013 LTV1Q96GA3 475 aaPredicted RBP27.41■■□□□ 1.98
TNFRSF11A-204ENST00000592013 KIF24Q5T7B8 1368 aa27.4■■□□□ 1.98
TNFRSF11A-204ENST00000592013 PPP1R1BQ9UD71 204 aaPredicted RBP27.4■■□□□ 1.98
TNFRSF11A-204ENST00000592013 FYB1O15117 783 aa27.39■■□□□ 1.98
TNFRSF11A-204ENST00000592013 TXNRD1Q16881 649 aa27.39■■□□□ 1.98
TNFRSF11A-204ENST00000592013 STK32BQ9NY57 414 aa27.39■■□□□ 1.98
TNFRSF11A-204ENST00000592013 NHSQ6T4R5 1651 aa27.39■■□□□ 1.97
TNFRSF11A-204ENST00000592013 KCNQ2O43526 872 aa27.38■■□□□ 1.97
TNFRSF11A-204ENST00000592013 CGNL1Q0VF96 1302 aa27.38■■□□□ 1.97
TNFRSF11A-204ENST00000592013 GGNBP2Q9H3C7 697 aa27.36■■□□□ 1.97
TNFRSF11A-204ENST00000592013 DCAF8L1A6NGE4 600 aa27.35■■□□□ 1.97
TNFRSF11A-204ENST00000592013 PTF1AQ7RTS3 328 aa27.33■■□□□ 1.97
TNFRSF11A-204ENST00000592013 DDX54Q8TDD1 881 aaKnown RBP27.33■■□□□ 1.97
TNFRSF11A-204ENST00000592013 HMGB2P26583 209 aaKnown RBP27.32■■□□□ 1.96
TNFRSF11A-204ENST00000592013 ACSBG1Q96GR2 724 aa27.32■■□□□ 1.96
TNFRSF11A-204ENST00000592013 KIF20BQ96Q89 1820 aa27.32■■□□□ 1.96
TNFRSF11A-204ENST00000592013 PROM2Q8N271 834 aa27.31■■□□□ 1.96
TNFRSF11A-204ENST00000592013 ZCRB1Q8TBF4 217 aaKnown RBP27.31■■□□□ 1.96
TNFRSF11A-204ENST00000592013 RAPGEF4Q8WZA2 1011 aa27.31■■□□□ 1.96
TNFRSF11A-204ENST00000592013 FLT4P35916 1363 aa27.31■■□□□ 1.96
TNFRSF11A-204ENST00000592013 RRS1Q15050 365 aaKnown RBP27.3■■□□□ 1.96
TNFRSF11A-204ENST00000592013 SLC15A2Q16348 729 aa27.3■■□□□ 1.96
TNFRSF11A-204ENST00000592013 CCER1Q8TC90 406 aaPredicted RBP27.3■■□□□ 1.96
TNFRSF11A-204ENST00000592013 INSRP06213 1382 aa27.29■■□□□ 1.96
TNFRSF11A-204ENST00000592013 SLC27A3Q5K4L6 730 aa27.28■■□□□ 1.96
TNFRSF11A-204ENST00000592013 ANO8Q9HCE9 1232 aaPredicted RBP27.28■■□□□ 1.96
TNFRSF11A-204ENST00000592013 NSD3Q9BZ95 1437 aa27.27■■□□□ 1.96
TNFRSF11A-204ENST00000592013 EIF4G2P78344 907 aaKnown RBP eCLIP27.27■■□□□ 1.96
TNFRSF11A-204ENST00000592013 TATP17735 454 aaPredicted RBP27.25■■□□□ 1.95
TNFRSF11A-204ENST00000592013 BTAF1O14981 1849 aa27.23■■□□□ 1.95
TNFRSF11A-204ENST00000592013 FBLN1P23142 703 aa27.23■■□□□ 1.95
TNFRSF11A-204ENST00000592013 SYTL4Q96C24 671 aaPredicted RBP27.23■■□□□ 1.95
TNFRSF11A-204ENST00000592013 MYOM1P52179 1685 aa27.23■■□□□ 1.95
TNFRSF11A-204ENST00000592013 NBPF6Q5VWK0 638 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms